Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 26001 |
SRR953582_primary_scf7180002196566_1-1221
Len: 1,220 bp
E-val: 5.5E-13
|
XP_026145747.1DNA-binding protein SATB1-like isoform X1
|
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
- |
| 26002 |
SRR953582_primary_scf7180002196577_1-1257
Len: 1,256 bp
E-val: 1.2E-39
|
KTG37752.1hypothetical protein cypCar_00016973
|
GO:0035035F:histone acetyltransferase binding GO:0043231C:intracellular membrane-bounded organelle GO:0044545C:NSL complex |
- |
| 26003 |
SRR953582_primary_scf7180002196587_1-1247
Len: 1,246 bp
E-val: 9.4E-61
|
XP_016403056.1PREDICTED: WD repeat-containing protein 59-like
|
GO:0034198P:cellular response to amino acid starvation GO:1904263P:positive regulation of TORC1 signaling GO:0035591F:signaling adaptor activity GO:0005774C:vacuolar membrane GO:0016020C:membrane GO:0035859C:Seh1-associated complex |
- |
| 26004 |
SRR953582_primary_scf7180002196613_1-2186
Len: 2,185 bp
E-val: 2.3E-54
|
XP_018941965.1PREDICTED: PR domain zinc finger protein 1-like, partial
Transferases
|
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0045165P:cell fate commitment GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0016740F:transferase activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
EC:EC:2 |
| 26005 |
SRR953582_primary_scf7180002196642_1106-2116
Len: 1,010 bp
E-val: 4.2E-35
|
KTF89359.1hypothetical protein cypCar_00020534
poly(A)-specific ribonuclease; Glycosylases
|
GO:0005975P:carbohydrate metabolic process GO:0006355P:regulation of DNA-templated transcription GO:0016477P:cell migration GO:0032475P:otolith formation GO:0035330P:regulation of hippo signaling GO:0046621P:negative regulation of organ growth GO:0071599P:otic vesicle development GO:0003676F:nucleic acid binding GO:0004535F:poly(A)-specific ribonuclease activity GO:0004553F:hydrolase activity, hydrolyzing O-glycosyl compounds GO:0019900F:kinase binding GO:0060090F:molecular adaptor activity GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0030014C:CCR4-NOT complex |
EC:EC:3.1.13.4 EC:EC:3.2.1 |
| 26006 |
SRR953582_primary_scf7180002196671_1-1234
Len: 1,233 bp
E-val: 7.4E-42
|
KTG35542.1hypothetical protein cypCar_00013277
|
GO:0003676F:nucleic acid binding GO:0003677F:DNA binding GO:0003723F:RNA binding GO:0004386F:helicase activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0016787F:hydrolase activity GO:0016887F:ATP hydrolysis activity GO:0043139F:5'-3' DNA helicase activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
- |
| 26007 |
SRR953582_primary_scf7180002196708_1-1129
Len: 1,128 bp
E-val: 8.9E-34
|
KTF78581.1hypothetical protein cypCar_00023484, partial
|
GO:0016043P:cellular component organization GO:0005622C:intracellular anatomical structure GO:0042995C:cell projection |
- |
| 26008 |
SRR953582_primary_scf7180002196729_142-1305
Len: 1,163 bp
E-val: 7.2E-79
|
KTG00066.1hypothetical protein cypCar_00017723
Transferring one-carbon groups
|
GO:0006338P:chromatin remodeling GO:0032259P:methylation GO:0008270F:zinc ion binding GO:0016279F:protein-lysine N-methyltransferase activity GO:0140938F:histone H3 methyltransferase activity GO:0005634C:nucleus GO:0005694C:chromosome |
EC:EC:2.1.1 |
| 26009 |
SRR953582_primary_scf7180002196753_713-1519
Len: 806 bp
E-val: 1.0E-60
|
KTG43268.1hypothetical protein cypCar_00001349
|
- | |
| 26010 |
SRR953582_primary_scf7180002196803_317-1532
Len: 1,215 bp
E-val: 3.3E-34
|
XP_018963390.1PREDICTED: tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4
|
GO:0008152P:metabolic process |
- |
| 26011 |
SRR953582_primary_scf7180002196804_615-1373
Len: 758 bp
E-val: 1.8E-22
|
XP_016390067.1PREDICTED: receptor tyrosine-protein kinase erbB-4-like
receptor protein-tyrosine kinase
|
GO:0007173P:epidermal growth factor receptor signaling pathway GO:0008284P:positive regulation of cell population proliferation GO:0008286P:insulin receptor signaling pathway GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0009966P:regulation of signal transduction GO:0022008P:neurogenesis GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0043066P:negative regulation of apoptotic process GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005154F:epidermal growth factor receptor binding GO:0005524F:ATP binding GO:0008288F:boss receptor activity GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0009925C:basal plasma membrane GO:0012505C:endomembrane system GO:0043235C:receptor complex |
EC:EC:2.7.10.1 |
| 26012 |
SRR953582_primary_scf7180002196845_1-752
Len: 751 bp
E-val: 5.6E-16
|
XP_021466570.1emopamil-binding protein-like
|
GO:0001568P:blood vessel development GO:0061298P:retina vasculature development in camera-type eye |
- |
| 26013 |
SRR953582_primary_scf7180002196861_1-664
Len: 663 bp
E-val: 2.6E-49
|
ROL44778.1Netrin-G1
|
- | |
| 26014 |
SRR953582_primary_scf7180002196882_1-984
Len: 983 bp
E-val: 2.9E-49
|
XP_018981633.1PREDICTED: phospholipid phosphatase 3-like isoform X1
phosphatidate phosphatase
|
GO:0006644P:phospholipid metabolic process GO:0007165P:signal transduction GO:0046839P:phospholipid dephosphorylation GO:0098609P:cell-cell adhesion GO:0008195F:phosphatidate phosphatase activity GO:0005886C:plasma membrane |
EC:EC:3.1.3.4 |
| 26015 |
SRR953582_primary_scf7180002196885_1-2066
Len: 2,065 bp
E-val: 3.0E-51
|
KTF81295.1hypothetical protein cypCar_00016085
glycogen phosphorylase
|
GO:0005980P:glycogen catabolic process GO:0048741P:skeletal muscle fiber development GO:0052576P:carbohydrate storage GO:0008184F:glycogen phosphorylase activity GO:0030170F:pyridoxal phosphate binding GO:0031220F:maltodextrin phosphorylase activity GO:0005737C:cytoplasm |
EC:EC:2.4.1.1 |
| 26016 |
SRR953582_primary_scf7180002196886_1-1101
Len: 1,100 bp
E-val: 1.4E-36
|
XP_018921142.1PREDICTED: cyclic AMP-dependent transcription factor ATF-7-like isoform X3
|
GO:0006355P:regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0003700F:DNA-binding transcription factor activity |
- |
| 26017 |
SRR953582_primary_scf7180002196887_1-1285
Len: 1,284 bp
E-val: 3.7E-44
|
KTG06167.1hypothetical protein cypCar_00018508
|
GO:0034220P:monoatomic ion transmembrane transport GO:0015276F:ligand-gated monoatomic ion channel activity GO:0045211C:postsynaptic membrane |
- |
| 26018 |
SRR953582_primary_scf7180002196902_1-857
Len: 856 bp
E-val: 2.6E-38
|
XP_026098624.1roquin-1-like isoform X1
Acyltransferases
|
GO:0000209P:protein polyubiquitination GO:0000288P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay GO:0006511P:ubiquitin-dependent protein catabolic process GO:0003725F:double-stranded RNA binding GO:0003729F:mRNA binding GO:0008270F:zinc ion binding GO:0035613F:RNA stem-loop binding GO:0061630F:ubiquitin protein ligase activity GO:0000932C:P-body GO:0010494C:cytoplasmic stress granule |
EC:EC:2.3.2 |
| 26019 |
SRR953582_primary_scf7180002196904_743-958
Len: 215 bp
E-val: 5.1E-31
|
KTG05138.1hypothetical protein cypCar_00007768
|
GO:0045893P:positive regulation of DNA-templated transcription GO:0003713F:transcription coactivator activity GO:0046982F:protein heterodimerization activity GO:0000124C:SAGA complex GO:0005634C:nucleus |
- |
| 26020 |
SRR953582_primary_scf7180002197030_235-1314
Len: 1,079 bp
E-val: 1.3E-188
|
XP_018927359.1PREDICTED: LOW QUALITY PROTEIN: 5-hydroxytryptamine receptor 1F-like
|
GO:0007187P:G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger GO:0007198P:adenylate cyclase-inhibiting serotonin receptor signaling pathway GO:0007268P:chemical synaptic transmission GO:0043410P:positive regulation of MAPK cascade GO:0071880P:adenylate cyclase-activating adrenergic receptor signaling pathway GO:0071881P:adenylate cyclase-inhibiting adrenergic receptor signaling pathway GO:0004938F:alpha2-adrenergic receptor activity GO:0004993F:G protein-coupled serotonin receptor activity GO:0030594F:neurotransmitter receptor activity GO:0005886C:plasma membrane GO:0030425C:dendrite GO:0045202C:synapse |
- |
| 26021 |
SRR953582_primary_scf7180002197103_1-1586
Len: 1,585 bp
E-val: 1.2E-47
|
XP_018942799.1PREDICTED: ATP-binding cassette sub-family A member 1-like, partial
|
GO:0006869P:lipid transport GO:0033700P:phospholipid efflux GO:0055085P:transmembrane transport GO:0005319F:lipid transporter activity GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0042626F:ATPase-coupled transmembrane transporter activity GO:0090554F:phosphatidylcholine floppase activity GO:0090556F:phosphatidylserine floppase activity GO:0140359F:ABC-type transporter activity GO:0016020C:membrane GO:0043231C:intracellular membrane-bounded organelle |
- |
| 26022 |
SRR953582_primary_scf7180002197105_1-1487
Len: 1,486 bp
E-val: 3.8E-32
|
XP_016344706.1PREDICTED: plexin-B2-like
|
GO:0007162P:negative regulation of cell adhesion GO:0007411P:axon guidance GO:0008360P:regulation of cell shape GO:0030334P:regulation of cell migration GO:0050772P:positive regulation of axonogenesis GO:0071526P:semaphorin-plexin signaling pathway GO:0017154F:semaphorin receptor activity GO:0002116C:semaphorin receptor complex GO:0005886C:plasma membrane |
- |
| 26023 |
SRR953582_primary_scf7180002197160_1-1565
Len: 1,564 bp
E-val: 5.4E-29
|
NP_999847.1cytohesin-1
|
GO:0055113P:epiboly involved in gastrulation with mouth forming second |
- |
| 26024 |
SRR953582_primary_scf7180002197166_1-1772
Len: 1,771 bp
E-val: 2.7E-122
|
KTF77418.1hypothetical protein cypCar_00034476
|
GO:0022603P:regulation of anatomical structure morphogenesis GO:0048675P:axon extension GO:0050794P:regulation of cellular process GO:0016020C:membrane |
- |
| 26025 |
SRR953582_primary_scf7180002197217_1-2020
Len: 2,019 bp
E-val: 1.5E-20
|
XP_016400818.1PREDICTED: syntaxin-binding protein 5-like
|
GO:0006887P:exocytosis GO:0006893P:Golgi to plasma membrane transport GO:0007399P:nervous system development GO:0005096F:GTPase activator activity GO:0019905F:syntaxin binding GO:0045159F:myosin II binding GO:0005886C:plasma membrane GO:0031201C:SNARE complex |
- |