Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 26026 |
SRR953582_primary_scf7180002197234_280-1233
Len: 953 bp
E-val: 2.3E-51
|
KTF93110.1hypothetical protein cypCar_00033293
|
GO:0006633P:fatty acid biosynthetic process |
- |
| 26027 |
SRR953582_primary_scf7180002197273_661-1837
Len: 1,176 bp
E-val: 1.5E-23
|
KTG31813.1hypothetical protein cypCar_00015730
|
GO:0006325P:chromatin organization GO:0006357P:regulation of transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0003713F:transcription coactivator activity GO:0008270F:zinc ion binding GO:0000124C:SAGA complex GO:0071819C:DUBm complex |
- |
| 26028 |
SRR953582_primary_scf7180002197329_115-861
Len: 746 bp
E-val: 3.3E-138
|
XP_018946713.1PREDICTED: neurotrophin-3-like
|
GO:0007169P:cell surface receptor protein tyrosine kinase signaling pathway GO:0007422P:peripheral nervous system development GO:0021675P:nerve development GO:0038180P:nerve growth factor signaling pathway GO:0043524P:negative regulation of neuron apoptotic process GO:0048812P:neuron projection morphogenesis GO:0050804P:modulation of chemical synaptic transmission GO:0005163F:nerve growth factor receptor binding GO:0008083F:growth factor activity GO:0005615C:extracellular space GO:0008021C:synaptic vesicle GO:0016020C:membrane GO:0030424C:axon GO:0030425C:dendrite |
- |
| 26029 |
SRR953582_primary_scf7180002197364_26-1249
Len: 1,223 bp
E-val: 1.1E-24
|
XP_018921753.1PREDICTED: protein spinster homolog 1-like isoform X1
|
GO:0006869P:lipid transport GO:0055085P:transmembrane transport GO:0090398P:cellular senescence GO:0097352P:autophagosome maturation GO:0022857F:transmembrane transporter activity GO:0005765C:lysosomal membrane GO:0012505C:endomembrane system |
- |
| 26030 |
SRR953582_primary_scf7180002197365_285-1139
Len: 854 bp
E-val: 2.5E-57
|
XP_018959574.1PREDICTED: low-density lipoprotein receptor-related protein 1B-like
|
GO:0006897P:endocytosis GO:0006898P:receptor-mediated endocytosis GO:0005041F:low-density lipoprotein particle receptor activity GO:0005509F:calcium ion binding GO:0042562F:hormone binding GO:0005886C:plasma membrane GO:0016020C:membrane GO:0016324C:apical plasma membrane GO:0043235C:receptor complex |
- |
| 26031 |
SRR953582_primary_scf7180002197388_1-1404
Len: 1,403 bp
E-val: 1.9E-46
|
XP_018975275.1PREDICTED: LOW QUALITY PROTEIN: sodium-dependent neutral amino acid transporter B(0)AT2-like
|
GO:0015695P:organic cation transport GO:0015804P:neutral amino acid transport GO:0046942P:carboxylic acid transport GO:0071705P:nitrogen compound transport GO:0110165C:cellular anatomical structure |
- |
| 26032 |
SRR953582_primary_scf7180002197404_1-1641
Len: 1,640 bp
E-val: 2.1E-52
|
XP_016396503.1PREDICTED: LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily M member 5-like
|
- | |
| 26033 |
SRR953582_primary_scf7180002197424_1-1284
Len: 1,283 bp
E-val: 1.3E-76
|
KTF86009.1hypothetical protein cypCar_00005726
|
GO:0007155P:cell adhesion GO:0004867F:serine-type endopeptidase inhibitor activity GO:0005581C:collagen trimer |
- |
| 26034 |
SRR953582_primary_scf7180002197461_1-944
Len: 943 bp
E-val: 6.5E-30
|
KTG36371.1hypothetical protein cypCar_00009485
myosin ATPase
|
GO:0035556P:intracellular signal transduction GO:0045198P:establishment of epithelial cell apical/basal polarity GO:0048731P:system development GO:0000146F:microfilament motor activity GO:0005096F:GTPase activator activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0051015F:actin filament binding GO:0005737C:cytoplasm GO:0005884C:actin filament GO:0016020C:membrane GO:0016459C:myosin complex GO:0044295C:axonal growth cone GO:0045202C:synapse |
EC:EC:5.6.1.8 |
| 26035 |
SRR953582_primary_scf7180002197486_1-1685
Len: 1,684 bp
E-val: 4.0E-30
|
XP_016355022.1PREDICTED: utrophin
|
GO:0099536P:synaptic signaling GO:0003779F:actin binding GO:0008270F:zinc ion binding GO:0005737C:cytoplasm GO:0005856C:cytoskeleton GO:0045211C:postsynaptic membrane GO:0120025C:plasma membrane bounded cell projection |
- |
| 26036 |
SRR953582_primary_scf7180002197557_1-843
Len: 842 bp
E-val: 3.1E-47
|
KTG34188.1hypothetical protein cypCar_00019942
|
GO:0009987P:cellular process |
- |
| 26037 |
SRR953582_primary_scf7180002197625_110-469
Len: 359 bp
E-val: 1.5E-51
|
KTF94626.1hypothetical protein cypCar_00002289, partial
receptor protein serine/threonine kinase
|
GO:0001837P:epithelial to mesenchymal transition GO:0002040P:sprouting angiogenesis GO:0016477P:cell migration GO:0017015P:regulation of transforming growth factor beta receptor signaling pathway GO:0030282P:bone mineralization GO:0061053P:somite development GO:0005024F:transforming growth factor beta receptor activity GO:0005114F:type II transforming growth factor beta receptor binding GO:0005539F:glycosaminoglycan binding GO:0050431F:transforming growth factor beta binding GO:0005576C:extracellular region GO:0005886C:plasma membrane |
EC:EC:2.7.11.30 |
| 26038 |
SRR953582_primary_scf7180002197640_1-1297
Len: 1,296 bp
E-val: 1.3E-65
|
KTG01402.1hypothetical protein cypCar_00023955
|
GO:0034474P:U2 snRNA 3'-end processing GO:0032039C:integrator complex |
- |
| 26039 |
SRR953582_primary_scf7180002197681_1-1960
Len: 1,959 bp
E-val: 6.7E-21
|
RXN15353.1cadherin-2
|
GO:0000902P:cell morphogenesis GO:0002009P:morphogenesis of an epithelium GO:0007043P:cell-cell junction assembly GO:0007156P:homophilic cell-cell adhesion GO:0007416P:synapse assembly GO:0016339P:calcium-dependent cell-cell adhesion GO:0016477P:cell migration GO:0034332P:adherens junction organization GO:0044331P:cell-cell adhesion mediated by cadherin GO:0005509F:calcium ion binding GO:0008013F:beta-catenin binding GO:0045296F:cadherin binding GO:0005737C:cytoplasm GO:0005912C:adherens junction GO:0009986C:cell surface GO:0014069C:postsynaptic density GO:0014704C:intercalated disc GO:0016342C:catenin complex GO:0030027C:lamellipodium GO:0030057C:desmosome GO:0042383C:sarcolemma GO:0043005C:neuron projection GO:0045177C:apical part of cell GO:0048787C:presynaptic active zone membrane GO:0099634C:postsynaptic specialization membrane |
- |
| 26040 |
SRR953582_primary_scf7180002197690_1-773
Len: 772 bp
E-val: 2.7E-18
|
KTG44780.1hypothetical protein cypCar_00036980
Acting on peptide bonds (peptidases)
|
GO:0006508P:proteolysis GO:0006886P:intracellular protein transport GO:0016192P:vesicle-mediated transport GO:0061025P:membrane fusion GO:0005484F:SNAP receptor activity GO:0030145F:manganese ion binding GO:0070006F:metalloaminopeptidase activity GO:0005737C:cytoplasm GO:0016020C:membrane |
EC:EC:3.4.11 |
| 26041 |
SRR953582_primary_scf7180002197692_1-1500
Len: 1,499 bp
E-val: 1.5E-81
|
KTG45459.1hypothetical protein cypCar_00000762
|
GO:0006346P:DNA methylation-dependent constitutive heterochromatin formation GO:0006355P:regulation of DNA-templated transcription GO:0003712F:transcription coregulator activity GO:0005634C:nucleus GO:0005667C:transcription regulator complex |
- |
| 26042 |
SRR953582_primary_scf7180002197696_726-1379
Len: 653 bp
E-val: 7.0E-23
|
XP_016382287.1PREDICTED: stathmin-4-like
|
GO:0007019P:microtubule depolymerization GO:0031110P:regulation of microtubule polymerization or depolymerization GO:0031175P:neuron projection development GO:0045664P:regulation of neuron differentiation GO:1902749P:regulation of cell cycle G2/M phase transition GO:0015631F:tubulin binding GO:0005794C:Golgi apparatus GO:0016020C:membrane GO:0043005C:neuron projection |
- |
| 26043 |
SRR953582_primary_scf7180002197758_1-1182
Len: 1,181 bp
E-val: 4.5E-113
|
XP_016098304.1PREDICTED: paired box protein Pax-1-like
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0033339P:pectoral fin development GO:0048706P:embryonic skeletal system development GO:0060037P:pharyngeal system development GO:1904888P:cranial skeletal system development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus GO:0016020C:membrane |
- |
| 26044 |
SRR953582_primary_scf7180002197857_1-1651
Len: 1,650 bp
E-val: 1.2E-23
|
KTG42835.1hypothetical protein cypCar_00010307
|
- | |
| 26045 |
SRR953582_primary_scf7180002197886_1-1118
Len: 1,117 bp
E-val: 1.9E-206
|
XP_018950252.1PREDICTED: hepatocyte nuclear factor 3-gamma-like, partial
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009653P:anatomical structure morphogenesis GO:0009888P:tissue development GO:0030154P:cell differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
- |
| 26046 |
SRR953582_primary_scf7180002197917_267-1460
Len: 1,193 bp
E-val: 7.0E-37
|
XP_018918486.1PREDICTED: LOW QUALITY PROTEIN: agrin
|
GO:0007409P:axonogenesis GO:0007417P:central nervous system development GO:0007422P:peripheral nervous system development GO:0009952P:anterior/posterior pattern specification GO:0010842P:retina layer formation GO:0043113P:receptor clustering GO:0005509F:calcium ion binding GO:0043236F:laminin binding GO:0005576C:extracellular region GO:0005886C:plasma membrane |
- |
| 26047 |
SRR953582_primary_scf7180002197944_251-1147
Len: 896 bp
E-val: 6.9E-90
|
KTG35520.1hypothetical protein cypCar_00012969
|
GO:0007155P:cell adhesion GO:0110165C:cellular anatomical structure |
- |
| 26048 |
SRR953582_primary_scf7180002198026_1-1404
Len: 1,403 bp
E-val: 3.9E-87
|
KTF77760.1hypothetical protein cypCar_00038872
|
GO:0051480P:regulation of cytosolic calcium ion concentration GO:0070588P:calcium ion transmembrane transport GO:0015279F:store-operated calcium channel activity GO:0070679F:inositol 1,4,5 trisphosphate binding GO:0005886C:plasma membrane GO:0034703C:cation channel complex |
- |
| 26049 |
SRR953582_primary_scf7180002198042_1-1324
Len: 1,323 bp
E-val: 1.0E-73
|
XP_026129152.1sarcosine dehydrogenase, mitochondrial-like
|
GO:1901053P:sarcosine catabolic process GO:0008480F:sarcosine dehydrogenase activity GO:0005737C:cytoplasm GO:0005739C:mitochondrion GO:0005759C:mitochondrial matrix |
- |
| 26050 |
SRR953582_primary_scf7180002198077_1-1072
Len: 1,071 bp
E-val: 9.7E-22
|
KTG42391.1hypothetical protein cypCar_00011354
uroporphyrinogen decarboxylase
|
GO:0006782P:protoporphyrinogen IX biosynthetic process GO:0004853F:uroporphyrinogen decarboxylase activity GO:0005829C:cytosol |
EC:EC:4.1.1.37 |