Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 26926 |
SRR953582_primary_scf7180002232640_305-625
Len: 320 bp
E-val: 3.0E-35
|
KTG05221.1hypothetical protein cypCar_00043153, partial
protein-tyrosine-phosphatase
|
GO:0006338P:chromatin remodeling GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0140793F:histone H2AXY142 phosphatase activity GO:0016020C:membrane |
EC:EC:3.1.3.48 |
| 26927 |
SRR953582_primary_scf7180002232688_1-1791
Len: 1,790 bp
E-val: 2.2E-50
|
XP_018967335.1PREDICTED: short-chain specific acyl-CoA dehydrogenase, mitochondrial-like isoform X1
short-chain acyl-CoA dehydrogenase
|
GO:0033539P:fatty acid beta-oxidation using acyl-CoA dehydrogenase GO:0046359P:butyrate catabolic process GO:0016937F:short-chain fatty acyl-CoA dehydrogenase activity GO:0005739C:mitochondrion |
EC:EC:1.3.8.1 |
| 26928 |
SRR953582_primary_scf7180002232715_1-986
Len: 985 bp
E-val: 1.5E-53
|
KTG01958.1hypothetical protein cypCar_00009100
|
GO:0060285P:cilium-dependent cell motility GO:0060287P:epithelial cilium movement involved in determination of left/right asymmetry GO:0070286P:axonemal dynein complex assembly GO:0005737C:cytoplasm GO:0005856C:cytoskeleton GO:0005929C:cilium |
- |
| 26929 |
SRR953582_primary_scf7180002232755_1-873
Len: 872 bp
E-val: 1.3E-32
|
XP_026129975.1endoplasmic reticulum aminopeptidase 1-like
Acting on peptide bonds (peptidases)
|
GO:0006508P:proteolysis GO:0043171P:peptide catabolic process GO:0008270F:zinc ion binding GO:0042277F:peptide binding GO:0070006F:metalloaminopeptidase activity GO:0005615C:extracellular space GO:0005737C:cytoplasm GO:0016020C:membrane |
EC:EC:3.4.11 |
| 26930 |
SRR953582_primary_scf7180002232923_1-1127
Len: 1,126 bp
E-val: 3.7E-40
|
KTF85099.1hypothetical protein cypCar_00037247, partial
|
GO:0006338P:chromatin remodeling GO:0016567P:protein ubiquitination GO:0030331F:nuclear estrogen receptor binding GO:1990244F:histone H2AT120 kinase activity GO:0005634C:nucleus GO:0080008C:Cul4-RING E3 ubiquitin ligase complex |
- |
| 26931 |
SRR953582_primary_scf7180002232929_1-679
Len: 678 bp
E-val: 2.4E-119
|
XP_018926758.1PREDICTED: 8-oxo-dGDP phosphatase NUDT18-like isoform X1
nucleoside diphosphate phosphatase
|
GO:0046057P:dADP catabolic process GO:0046067P:dGDP catabolic process GO:0046712P:GDP catabolic process GO:0044715F:8-oxo-dGDP phosphatase activity GO:0044716F:8-oxo-GDP phosphatase activity GO:0044717F:8-hydroxy-dADP phosphatase activity GO:0046872F:metal ion binding |
EC:EC:3.6.1.6 |
| 26932 |
SRR953582_primary_scf7180002232953_789-1150
Len: 361 bp
E-val: 2.2E-39
|
RXN20722.1estrogen-related receptor gamma isoform X5
|
GO:0006355P:regulation of DNA-templated transcription GO:0030518P:nuclear receptor-mediated steroid hormone signaling pathway GO:0003707F:nuclear steroid receptor activity GO:0005496F:steroid binding GO:0008270F:zinc ion binding GO:0042562F:hormone binding GO:0043565F:sequence-specific DNA binding GO:0005634C:nucleus |
- |
| 26933 |
SRR953582_primary_scf7180002233022_1-621
Len: 620 bp
E-val: 2.1E-21
|
KTG45424.1hypothetical protein cypCar_00041572
|
GO:0001755P:neural crest cell migration GO:0001843P:neural tube closure GO:0007266P:Rho protein signal transduction GO:0030036P:actin cytoskeleton organization GO:0043085P:positive regulation of catalytic activity GO:0048484P:enteric nervous system development GO:0051726P:regulation of cell cycle GO:0061386P:closure of optic fissure GO:2001045P:negative regulation of integrin-mediated signaling pathway GO:0003779F:actin binding GO:0008157F:protein phosphatase 1 binding GO:0072542F:protein phosphatase activator activity GO:0005737C:cytoplasm GO:0030027C:lamellipodium |
- |
| 26934 |
SRR953582_primary_scf7180002233049_1-179
Len: 178 bp
E-val: 7.7E-25
|
KTF83379.1hypothetical protein cypCar_00040089
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
- |
| 26935 |
SRR953582_primary_scf7180002233069_1-1127
Len: 1,126 bp
E-val: 4.0E-18
|
KTF89860.1hypothetical protein cypCar_00023508
|
GO:0007156P:homophilic cell-cell adhesion GO:0008037P:cell recognition GO:0042271P:susceptibility to natural killer cell mediated cytotoxicity GO:0051606P:detection of stimulus GO:0005102F:signaling receptor binding GO:0005886C:plasma membrane GO:0043005C:neuron projection GO:0045202C:synapse |
- |
| 26936 |
SRR953582_primary_scf7180002233097_1-838
Len: 837 bp
E-val: 3.1E-39
|
XP_018927140.1PREDICTED: NT-3 growth factor receptor-like
receptor protein-tyrosine kinase
|
GO:0007173P:epidermal growth factor receptor signaling pathway GO:0007417P:central nervous system development GO:0008286P:insulin receptor signaling pathway GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0010976P:positive regulation of neuron projection development GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0038179P:neurotrophin signaling pathway GO:0043066P:negative regulation of apoptotic process GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0051897P:positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction GO:1990090P:cellular response to nerve growth factor stimulus GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005524F:ATP binding GO:0008288F:boss receptor activity GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0043121F:neurotrophin binding GO:0046872F:metal ion binding GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0005886C:plasma membrane GO:0012505C:endomembrane system GO:0030424C:axon GO:0043235C:receptor complex |
EC:EC:2.7.10.1 |
| 26937 |
SRR953582_primary_scf7180002233122_1-1044
Len: 1,043 bp
E-val: 4.1E-33
|
XP_018962084.1PREDICTED: zinc finger SWIM domain-containing protein 6-like
|
GO:0031462C:Cul2-RING ubiquitin ligase complex |
- |
| 26938 |
SRR953582_primary_scf7180002233126_39-1524
Len: 1,485 bp
E-val: 2.4E-39
|
RXN37202.1solute carrier organic anion transporter family member 1C1-like isoform X1
|
GO:0006811P:monoatomic ion transport GO:0043252P:sodium-independent organic anion transport GO:0055085P:transmembrane transport GO:0015347F:obsolete sodium-independent organic anion transmembrane transporter activity GO:0022857F:transmembrane transporter activity GO:0005886C:plasma membrane GO:0016020C:membrane GO:0016323C:basolateral plasma membrane |
- |
| 26939 |
SRR953582_primary_scf7180002233203_1-542
Len: 541 bp
E-val: 2.6E-15
|
KTG37755.1hypothetical protein cypCar_00025622
gamma-glutamylcyclotransferase
|
GO:0003839F:gamma-glutamylcyclotransferase activity GO:0016020C:membrane |
EC:EC:4.3.2.9 |
| 26940 |
SRR953582_primary_scf7180002233243_42-1576
Len: 1,534 bp
E-val: 8.6E-56
|
XP_018969745.1PREDICTED: LOW QUALITY PROTEIN: titin-like
|
- | |
| 26941 |
SRR953582_primary_scf7180002233361_1-723
Len: 722 bp
E-val: 6.1E-12
|
XP_026142203.1LOW QUALITY PROTEIN: ral GTPase-activating protein subunit alpha-1-like
|
GO:0051056P:regulation of small GTPase mediated signal transduction GO:0005096F:GTPase activator activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
- |
| 26942 |
SRR953582_primary_scf7180002233383_1-973
Len: 972 bp
E-val: 2.9E-89
|
XP_018961593.1PREDICTED: MKL/myocardin-like protein 1 isoform X1
|
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0051145P:smooth muscle cell differentiation GO:0003713F:transcription coactivator activity GO:0005634C:nucleus |
- |
| 26943 |
SRR953582_primary_scf7180002233408_186-969
Len: 783 bp
E-val: 8.9E-25
|
XP_026074562.1fer-1-like protein 6
|
GO:0007009P:plasma membrane organization GO:0036211P:protein modification process GO:0046872F:metal ion binding GO:0016020C:membrane |
- |
| 26944 |
SRR953582_primary_scf7180002233538_1-1093
Len: 1,092 bp
E-val: 3.3E-33
|
XP_026139027.1CUB and sushi domain-containing protein 3-like isoform X2
|
GO:0016020C:membrane |
- |
| 26945 |
SRR953582_primary_scf7180002233563_1-1328
Len: 1,327 bp
E-val: 7.5E-16
|
XP_026129443.1T-lymphoma invasion and metastasis-inducing protein 1-like isoform X2
|
GO:0007264P:small GTPase-mediated signal transduction GO:0050772P:positive regulation of axonogenesis GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005829C:cytosol GO:0005886C:plasma membrane GO:0045202C:synapse |
- |
| 26946 |
SRR953582_primary_scf7180002233609_1-1430
Len: 1,429 bp
E-val: 7.3E-25
|
XP_018934509.1PREDICTED: circadian locomoter output cycles protein kaput-like
|
GO:0007623P:circadian rhythm GO:0009648P:photoperiodism GO:0010468P:regulation of gene expression GO:0003690F:double-stranded DNA binding GO:0005622C:intracellular anatomical structure |
- |
| 26947 |
SRR953582_primary_scf7180002233618_1-1152
Len: 1,151 bp
E-val: 6.1E-22
|
XP_018934745.1PREDICTED: alpha-2,8-sialyltransferase 8F-like isoform X1
|
GO:0006486P:obsolete protein glycosylation GO:0006491P:N-glycan processing GO:0009311P:oligosaccharide metabolic process GO:0021628P:olfactory nerve formation GO:0071699P:olfactory placode morphogenesis GO:0003828F:alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity GO:0008373F:sialyltransferase activity GO:0016757F:glycosyltransferase activity GO:0000139C:Golgi membrane GO:0005794C:Golgi apparatus GO:0016020C:membrane |
- |
| 26948 |
SRR953582_primary_scf7180002233739_1-647
Len: 646 bp
E-val: 7.1E-20
|
XP_018947689.1PREDICTED: N-alpha-acetyltransferase 25, NatB auxiliary subunit-like
Transferases
|
GO:0007010P:cytoskeleton organization GO:0010698F:acetyltransferase activator activity GO:0016740F:transferase activity GO:0031416C:NatB complex |
EC:EC:2 |
| 26949 |
SRR953582_primary_scf7180002233779_1-854
Len: 853 bp
E-val: 1.3E-16
|
KTG31595.1hypothetical protein cypCar_00005025, partial
Intramolecular transferases
|
GO:0001522P:pseudouridine synthesis GO:0008033P:tRNA processing GO:0003723F:RNA binding GO:0009982F:pseudouridine synthase activity GO:0005794C:Golgi apparatus GO:0016020C:membrane |
EC:EC:5.4 |
| 26950 |
SRR953582_primary_scf7180002233792_18-1041
Len: 1,023 bp
E-val: 9.2E-54
|
RXN35521.1phytanoyl- hydroxylase-interacting -like protein
|
- |