Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 2901 |
SRR924332_primary_scf7180002783830_1-2178
Len: 2,177 bp
E-val: 0.0
|
ROL41070.1Protocadherin alpha-C2
|
GO:0007156P:homophilic cell-cell adhesion GO:0009653P:anatomical structure morphogenesis GO:0005509F:calcium ion binding GO:0005886C:plasma membrane |
- |
| 2902 |
SRR924332_primary_scf7180002783851_1-1393
Len: 1,392 bp
E-val: 3.0E-92
|
XP_018928755.1PREDICTED: uncharacterized protein LOC109056028 isoform X1
|
-
|
- |
| 2903 |
SRR924332_primary_scf7180002783852_1-2484
Len: 2,483 bp
E-val: 2.8E-197
|
RXN04216.1myosin heavy fast skeletal muscle-like protein
Transferring phosphorus-containing groups
|
GO:0006955P:immune response GO:0007173P:epidermal growth factor receptor signaling pathway GO:0008284P:positive regulation of cell population proliferation GO:0045840P:positive regulation of mitotic nuclear division GO:0060326P:cell chemotaxis GO:0071897P:DNA biosynthetic process GO:0003676F:nucleic acid binding GO:0005154F:epidermal growth factor receptor binding GO:0008009F:chemokine activity GO:0008083F:growth factor activity GO:0008270F:zinc ion binding GO:0034061F:DNA polymerase activity GO:0005615C:extracellular space GO:0016020C:membrane |
EC:EC:2.7.7 |
| 2904 |
SRR924332_primary_scf7180002783854_1598-2488
Len: 890 bp
E-val: 8.9E-138
|
XP_018976139.1PREDICTED: LINE-1 type transposase domain-containing protein 1
|
-
|
- |
| 2905 |
SRR924332_primary_scf7180002783883_1-2132
Len: 2,131 bp
E-val: 5.8E-228
|
ROI16187.1Transposon Tf2-6 polyprotein
|
GO:0006259P:DNA metabolic process GO:0004519F:endonuclease activity GO:0005488F:binding GO:0110165C:cellular anatomical structure |
- |
| 2906 |
SRR924332_primary_scf7180002783892_1-409
Len: 408 bp
E-val: 6.5E-35
|
XP_018957784.1PREDICTED: dual specificity phosphatase DUPD1-like
protein-serine/threonine phosphatase
|
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0043409P:negative regulation of MAPK cascade GO:0008138F:protein tyrosine/serine/threonine phosphatase activity GO:0017018F:myosin phosphatase activity GO:0033192F:calmodulin-dependent protein phosphatase activity GO:0140791F:histone H2AXS139 phosphatase activity GO:0180004F:RNA polymerase II CTD heptapeptide repeat Y1 phosphatase activity GO:0180005F:RNA polymerase II CTD heptapeptide repeat T4 phosphatase activity GO:0180006F:RNA polymerase II CTD heptapeptide repeat S2 phosphatase activity GO:0180007F:RNA polymerase II CTD heptapeptide repeat S5 phosphatase activity GO:0180008F:RNA polymerase II CTD heptapeptide repeat S7 phosphatase activity GO:1990439F:MAP kinase serine/threonine phosphatase activity GO:0005737C:cytoplasm |
EC:EC:3.1.3.16 |
| 2907 |
SRR924332_primary_scf7180002783973_1478-2456
Len: 978 bp
E-val: 2.8E-145
|
XP_018952193.1PREDICTED: zinc finger MYM-type protein 1-like
|
GO:0046983F:protein dimerization activity GO:0005737C:cytoplasm |
- |
| 2908 |
SRR924332_primary_scf7180002783987_1-1112
Len: 1,111 bp
E-val: 2.2E-133
|
RXN22467.1nuclease HARBI1
Acting on peptide bonds (peptidases)
|
GO:0006508P:proteolysis GO:0016926P:protein desumoylation GO:0004518F:nuclease activity GO:0008234F:cysteine-type peptidase activity GO:0046872F:metal ion binding GO:0005634C:nucleus |
EC:EC:3.4 |
| 2909 |
SRR924332_primary_scf7180002784002_990-2093
Len: 1,103 bp
E-val: 8.7E-151
|
XP_026038825.1uncharacterized protein LOC113031129
|
GO:0003677F:DNA binding GO:0005634C:nucleus |
- |
| 2910 |
SRR924332_primary_scf7180002784003_1-1279
Len: 1,278 bp
E-val: 6.3E-60
|
RXN13515.1gypsy-16 si
|
- | |
| 2911 |
SRR924332_primary_scf7180002784015_444-1550
Len: 1,106 bp
E-val: 3.5E-160
|
XP_027003065.1uncharacterized protein K02A2.6-like
Acting on peptide bonds (peptidases)
|
GO:0006508P:proteolysis GO:0015074P:DNA integration GO:0003676F:nucleic acid binding GO:0004190F:aspartic-type endopeptidase activity GO:0008270F:zinc ion binding |
EC:EC:3.4.23 |
| 2912 |
SRR924332_primary_scf7180002784139_1006-2034
Len: 1,028 bp
E-val: 1.1E-184
|
XP_018969938.1PREDICTED: zinc finger BED domain-containing protein 1-like
|
GO:0005488F:binding |
- |
| 2913 |
SRR924332_primary_scf7180002784166_132-971
Len: 839 bp
E-val: 2.4E-7
|
XP_016116500.1PREDICTED: phosphatidylinositol 4-kinase alpha-like
|
GO:0046854P:phosphatidylinositol phosphate biosynthetic process GO:0048015P:phosphatidylinositol-mediated signaling GO:0004430F:1-phosphatidylinositol 4-kinase activity GO:0016301F:kinase activity GO:0005737C:cytoplasm GO:0005886C:plasma membrane |
- |
| 2914 |
SRR924332_primary_scf7180002784191_1-687
Len: 686 bp
E-val: 1.9E-79
|
XP_016422359.1PREDICTED: zinc finger BED domain-containing protein 4-like isoform X1
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
- |
| 2915 |
SRR924332_primary_scf7180002784196_50-1267
Len: 1,217 bp
E-val: 7.4E-220
|
ROL44982.1ALK tyrosine kinase receptor, partial
receptor protein-tyrosine kinase
|
GO:0007173P:epidermal growth factor receptor signaling pathway GO:0008286P:insulin receptor signaling pathway GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0003677F:DNA binding GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0008288F:boss receptor activity GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0046983F:protein dimerization activity GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0005634C:nucleus GO:0005886C:plasma membrane |
EC:EC:2.7.10.1 |
| 2916 |
SRR924332_primary_scf7180002784200_403-1050
Len: 647 bp
E-val: 1.0E-74
|
XP_018950409.1PREDICTED: serine/threonine-protein kinase pim-1-like
Transferring phosphorus-containing groups
|
GO:0006338P:chromatin remodeling GO:0007346P:regulation of mitotic cell cycle GO:0043066P:negative regulation of apoptotic process GO:0004676F:3-phosphoinositide-dependent protein kinase activity GO:0004677F:DNA-dependent protein kinase activity GO:0004679F:AMP-activated protein kinase activity GO:0004694F:eukaryotic translation initiation factor 2alpha kinase activity GO:0004711F:ribosomal protein S6 kinase activity GO:0005524F:ATP binding GO:0035175F:histone H3S10 kinase activity GO:0035402F:histone H3T11 kinase activity GO:0035403F:histone H3T6 kinase activity GO:0035979F:histone H2AXS139 kinase activity GO:0044022F:histone H3S28 kinase activity GO:0044023F:histone H4S1 kinase activity GO:0044024F:histone H2AS1 kinase activity GO:0044025F:histone H2BS14 kinase activity GO:0072354F:histone H3T3 kinase activity GO:0072518F:Rho-dependent protein serine/threonine kinase activity GO:0106310F:protein serine kinase activity GO:0140823F:histone H2BS36 kinase activity GO:0140855F:histone H3S57 kinase activity GO:0140857F:histone H3T45 kinase activity GO:1990244F:histone H2AT120 kinase activity GO:0005737C:cytoplasm GO:0016020C:membrane |
EC:EC:2.7.11 |
| 2917 |
SRR924332_primary_scf7180002784211_764-1616
Len: 852 bp
E-val: 1.3E-146
|
XP_018956840.1PREDICTED: 5-hydroxytryptamine receptor 1B-like
|
GO:0007187P:G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger GO:0007198P:adenylate cyclase-inhibiting serotonin receptor signaling pathway GO:0007268P:chemical synaptic transmission GO:0042310P:vasoconstriction GO:0043410P:positive regulation of MAPK cascade GO:0046849P:bone remodeling GO:0050795P:regulation of behavior GO:0071880P:adenylate cyclase-activating adrenergic receptor signaling pathway GO:0071881P:adenylate cyclase-inhibiting adrenergic receptor signaling pathway GO:0004938F:alpha2-adrenergic receptor activity GO:0004993F:G protein-coupled serotonin receptor activity GO:0030594F:neurotransmitter receptor activity GO:0005886C:plasma membrane GO:0030425C:dendrite GO:0045202C:synapse |
- |
| 2918 |
SRR924332_primary_scf7180002784213_1022-1711
Len: 689 bp
E-val: 5.4E-74
|
XP_016371248.1PREDICTED: uncharacterized protein LOC107710894
|
GO:0007155P:cell adhesion GO:0046872F:metal ion binding GO:0005576C:extracellular region GO:0005634C:nucleus GO:0031012C:extracellular matrix |
- |
| 2919 |
SRR924332_primary_scf7180002784247_1-1277
Len: 1,276 bp
E-val: 2.4E-80
|
XP_028979363.1DNA transposase THAP9 isoform X3
|
GO:0005488F:binding |
- |
| 2920 |
SRR924332_primary_scf7180002784280_1-643
Len: 642 bp
E-val: 1.5E-115
|
XP_018944325.1PREDICTED: uncharacterized protein LOC109072540
|
GO:0015074P:DNA integration GO:0003676F:nucleic acid binding GO:0110165C:cellular anatomical structure |
- |
| 2921 |
SRR924332_primary_scf7180002784358_200-1426
Len: 1,226 bp
E-val: 2.1E-166
|
XP_026121502.1uncharacterized protein LOC113101986 isoform X1
|
GO:0003676F:nucleic acid binding GO:0008270F:zinc ion binding |
- |
| 2922 |
SRR924332_primary_scf7180002784359_1-2441
Len: 2,440 bp
E-val: 2.7E-176
|
XP_018942129.1PREDICTED: uncharacterized protein LOC109069977
|
GO:0003677F:DNA binding GO:0008270F:zinc ion binding |
- |
| 2923 |
SRR924332_primary_scf7180002784388_712-1554
Len: 842 bp
E-val: 2.2E-146
|
XP_014038267.1PREDICTED: zinc finger BED domain-containing protein 1-like
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0003677F:DNA binding GO:0008270F:zinc ion binding GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
- |
| 2924 |
SRR924332_primary_scf7180002784504_1-1050
Len: 1,049 bp
E-val: 1.6E-165
|
XP_026075420.1protocadherin beta-16-like
|
GO:0007156P:homophilic cell-cell adhesion GO:0009653P:anatomical structure morphogenesis GO:0005509F:calcium ion binding GO:0005886C:plasma membrane |
- |
| 2925 |
SRR924332_primary_scf7180002784524_1-1016
Len: 1,015 bp
E-val: 5.6E-120
|
XP_021179457.1piggyBac transposable element-derived protein 2-like
|
-
|
- |