Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 2926 |
SRR924332_primary_scf7180002784640_77-1090
Len: 1,013 bp
E-val: 2.2E-47
|
XP_018981124.1PREDICTED: E3 ubiquitin-protein ligase RBBP6-like
|
GO:0006397P:mRNA processing GO:0006511P:ubiquitin-dependent protein catabolic process GO:0016567P:protein ubiquitination GO:0003676F:nucleic acid binding GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0061630F:ubiquitin protein ligase activity GO:0005634C:nucleus |
- |
| 2927 |
SRR924332_primary_scf7180002784678_322-1221
Len: 899 bp
E-val: 1.0E-133
|
RXN06599.1Transposon Ty3-G Gag-Pol poly
|
GO:0015074P:DNA integration GO:0003676F:nucleic acid binding |
- |
| 2928 |
SRR924332_primary_scf7180002784705_1-1372
Len: 1,371 bp
E-val: 2.8E-58
|
XP_018977181.1PREDICTED: arachidonate 5-lipoxygenase-like
|
GO:0006629P:lipid metabolic process GO:0019369P:arachidonate metabolic process GO:0019372P:lipoxygenase pathway GO:0034440P:lipid oxidation GO:0004051F:arachidonate 5-lipoxygenase activity GO:0005506F:iron ion binding GO:0016702F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen GO:0046872F:metal ion binding GO:0051213F:dioxygenase activity GO:0005635C:nuclear envelope GO:0005737C:cytoplasm |
- |
| 2929 |
SRR924332_primary_scf7180002784719_768-1568
Len: 800 bp
E-val: 9.1E-150
|
KTF76526.1hypothetical protein cypCar_00030964
|
GO:0008150P:biological_process GO:0003674F:molecular_function |
- |
| 2930 |
SRR924332_primary_scf7180002784772_1-1369
Len: 1,368 bp
E-val: 7.5E-35
|
XP_018948814.1PREDICTED: extended synaptotagmin-1-like, partial
|
GO:0005488F:binding |
- |
| 2931 |
SRR924332_primary_scf7180002784941_36-1031
Len: 995 bp
E-val: 6.6E-158
|
XP_018973424.1PREDICTED: uncharacterized protein LOC109104605
|
GO:0009987P:cellular process GO:0110165C:cellular anatomical structure |
- |
| 2932 |
SRR924332_primary_scf7180002784943_1198-2028
Len: 830 bp
E-val: 2.7E-152
|
XP_018938948.1PREDICTED: histamine H3 receptor-like
|
GO:0007187P:G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger GO:0007197P:adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway GO:0007268P:chemical synaptic transmission GO:0098664P:G protein-coupled serotonin receptor signaling pathway GO:0004969F:histamine receptor activity GO:0004993F:G protein-coupled serotonin receptor activity GO:0016907F:G protein-coupled acetylcholine receptor activity GO:0005886C:plasma membrane GO:0030425C:dendrite GO:0045202C:synapse |
- |
| 2933 |
SRR924332_primary_scf7180002785002_237-656
Len: 419 bp
E-val: 2.9E-67
|
ROK54656.1DNA transposase THAP9
Transferring phosphorus-containing groups
|
GO:0016043P:cellular component organization GO:0003677F:DNA binding GO:0004674F:protein serine/threonine kinase activity GO:0008270F:zinc ion binding GO:0140996F:histone H3 kinase activity GO:0005622C:intracellular anatomical structure GO:0016020C:membrane |
EC:EC:2.7.11 |
| 2934 |
SRR924332_primary_scf7180002785004_1-2165
Len: 2,164 bp
E-val: 0.0
|
KTG01613.1hypothetical protein cypCar_00018074
glucuronosyl-galactosyl-proteoglycan 4-alpha-N-
|
GO:0015012P:heparan sulfate proteoglycan biosynthetic process GO:0030516P:regulation of axon extension GO:0031290P:retinal ganglion cell axon guidance GO:0033564P:anterior/posterior axon guidance GO:0035118P:embryonic pectoral fin morphogenesis GO:0045743P:positive regulation of fibroblast growth factor receptor signaling pathway GO:0048538P:thymus development GO:0050650P:chondroitin sulfate proteoglycan biosynthetic process GO:0001888F:glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity GO:0005789C:endoplasmic reticulum membrane GO:0005794C:Golgi apparatus |
EC:EC:2.4.1.223 |
| 2935 |
SRR924332_primary_scf7180002785021_809-1403
Len: 594 bp
E-val: 3.7E-63
|
KTG41839.1hypothetical protein cypCar_00013511, partial
|
GO:0012505C:endomembrane system GO:0016020C:membrane |
- |
| 2936 |
SRR924332_primary_scf7180002785023_1-1354
Len: 1,353 bp
E-val: 2.1E-183
|
XP_016380896.1PREDICTED: zinc finger MYM-type protein 1-like
|
GO:0046983F:protein dimerization activity |
- |
| 2937 |
SRR924332_primary_scf7180002785024_372-1151
Len: 779 bp
E-val: 3.4E-133
|
XP_018938278.1PREDICTED: mitogen-activated protein kinase kinase kinase 11-like
mitogen-activated protein kinase kinase kinase
|
GO:0000165P:MAPK cascade GO:0007017P:microtubule-based process GO:0043065P:positive regulation of apoptotic process GO:0004706F:JUN kinase kinase kinase activity GO:0005524F:ATP binding GO:0106310F:protein serine kinase activity GO:0005813C:centrosome |
EC:EC:2.7.11.25 |
| 2938 |
SRR924332_primary_scf7180002785080_173-1237
Len: 1,064 bp
E-val: 2.9E-204
|
XP_018978779.1PREDICTED: rhodopsin isoform X2
|
GO:0007601P:visual perception GO:0016038P:absorption of visible light GO:0016056P:G protein-coupled opsin signaling pathway GO:0005502F:11-cis retinal binding GO:0008020F:G protein-coupled photoreceptor activity GO:0046872F:metal ion binding GO:0005886C:plasma membrane GO:0097381C:photoreceptor disc membrane |
- |
| 2939 |
SRR924332_primary_scf7180002785142_213-1145
Len: 932 bp
E-val: 1.8E-85
|
RXN17462.1putative transposase element L1Md-A101/L1Md-A102/L1Md-A2
|
GO:0008152P:metabolic process |
- |
| 2940 |
SRR924332_primary_scf7180002785155_213-986
Len: 773 bp
E-val: 2.8E-140
|
KTG05701.1hypothetical protein cypCar_00023230
|
GO:0007267P:cell-cell signaling GO:0055085P:transmembrane transport GO:0005243F:gap junction channel activity GO:0005922C:connexin complex |
- |
| 2941 |
SRR924332_primary_scf7180002785199_1-913
Len: 912 bp
E-val: 1.4E-74
|
XP_018930319.1PREDICTED: 1-acylglycerol-3-phosphate O-acyltransferase ABHD5-like
Acting on ester bonds; Acyltransferases
|
GO:0001868P:regulation of complement activation, lectin pathway GO:0006631P:fatty acid metabolic process GO:0006654P:phosphatidic acid biosynthetic process GO:0010185P:regulation of cellular defense response GO:0010891P:negative regulation of triglyceride storage GO:0010898P:positive regulation of triglyceride catabolic process GO:0030154P:cell differentiation GO:0045132P:meiotic chromosome segregation GO:0055088P:lipid homeostasis GO:0042171F:lysophosphatidic acid acyltransferase activity GO:0042806F:fucose binding GO:0052689F:carboxylic ester hydrolase activity GO:0000775C:chromosome, centromeric region GO:0005634C:nucleus GO:0005739C:mitochondrion GO:0005811C:lipid droplet |
EC:EC:3.1.1 EC:EC:2.3.1 |
| 2942 |
SRR924332_primary_scf7180002785611_561-1193
Len: 632 bp
E-val: 4.9E-90
|
XP_016351069.1PREDICTED: collagen alpha-3(VI) chain-like isoform X1
|
GO:0007155P:cell adhesion GO:0004867F:serine-type endopeptidase inhibitor activity GO:0005581C:collagen trimer GO:0005615C:extracellular space |
- |
| 2943 |
SRR924332_primary_scf7180002785616_906-1275
Len: 369 bp
E-val: 3.1E-28
|
XP_026114023.1kelch-like protein 29 isoform X2
|
-
|
- |
| 2944 |
SRR924332_primary_scf7180002785635_436-1600
Len: 1,164 bp
E-val: 7.8E-118
|
XP_016407270.1PREDICTED: serine/threonine-protein kinase SBK1-like
Transferring phosphorus-containing groups; dual-specificity kinase; mitogen-activated protein kinase kinase
|
GO:0000165P:MAPK cascade GO:0004674F:protein serine/threonine kinase activity GO:0004708F:MAP kinase kinase activity GO:0005524F:ATP binding |
EC:EC:2.7.11 EC:EC:2.7.12.1 EC:EC:2.7.12.2 |
| 2945 |
SRR924332_primary_scf7180002785644_1-741
Len: 740 bp
E-val: 9.3E-24
|
KTG12951.1hypothetical protein cypCar_00002336, partial
|
GO:0007507P:heart development GO:0030036P:actin cytoskeleton organization GO:0061061P:muscle structure development GO:0003779F:actin binding GO:0046872F:metal ion binding GO:0051371F:muscle alpha-actinin binding GO:0001725C:stress fiber GO:0005912C:adherens junction GO:0030018C:Z disc GO:0031941C:filamentous actin |
- |
| 2946 |
SRR924332_primary_scf7180002785655_259-1116
Len: 857 bp
E-val: 1.6E-99
|
ROI15273.1LINE-1 retrotransposable element ORF1 protein
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
- |
| 2947 |
SRR924332_primary_scf7180002785657_1-1518
Len: 1,517 bp
E-val: 6.6E-32
|
XP_016123404.1PREDICTED: transcription factor COE3 isoform X2
|
GO:0006355P:regulation of DNA-templated transcription GO:0007399P:nervous system development GO:0003677F:DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
- |
| 2948 |
SRR924332_primary_scf7180002785663_17-683
Len: 666 bp
E-val: 1.5E-60
|
XP_018970746.1PREDICTED: ubiquitin carboxyl-terminal hydrolase 34-like
ubiquitinyl hydrolase 1
|
GO:0016579P:protein deubiquitination GO:0031647P:regulation of protein stability GO:0004843F:cysteine-type deubiquitinase activity GO:0005634C:nucleus GO:0005829C:cytosol |
EC:EC:3.4.19.12 |
| 2949 |
SRR924332_primary_scf7180002785664_72-737
Len: 665 bp
E-val: 1.5E-97
|
KTF82155.1hypothetical protein cypCar_00041127
Transferring one-carbon groups
|
GO:0032259P:methylation GO:0008168F:methyltransferase activity |
EC:EC:2.1.1 |
| 2950 |
SRR924332_primary_scf7180002785701_263-1570
Len: 1,307 bp
E-val: 9.7E-250
|
KTF84563.1hypothetical protein cypCar_00047583
|
- |