Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 3326 |
SRR924332_primary_scf7180003070801_60-971
Len: 911 bp
E-val: 5.0E-160
|
XP_018965215.1PREDICTED: LOW QUALITY PROTEIN: G-protein coupled receptor 183-A-like
|
GO:0002250P:adaptive immune response GO:0002407P:dendritic cell chemotaxis GO:0007186P:G protein-coupled receptor signaling pathway GO:0010818P:T cell chemotaxis GO:0030316P:osteoclast differentiation GO:0036145P:dendritic cell homeostasis GO:0045746P:negative regulation of Notch signaling pathway GO:0060216P:definitive hemopoiesis GO:0061470P:T follicular helper cell differentiation GO:0070374P:positive regulation of ERK1 and ERK2 cascade GO:0098508P:endothelial to hematopoietic transition GO:2000458P:regulation of astrocyte chemotaxis GO:0004930F:G protein-coupled receptor activity GO:0005515F:protein binding GO:0008142F:oxysterol binding GO:0005886C:plasma membrane |
- |
| 3327 |
SRR924332_primary_scf7180003073215_1-948
Len: 947 bp
E-val: 1.7E-33
|
KTF90332.1hypothetical protein cypCar_00050220, partial
|
GO:0043565F:sequence-specific DNA binding |
- |
| 3328 |
SRR924332_primary_scf7180003073712_1-818
Len: 817 bp
E-val: 7.8E-48
|
KTF89577.1hypothetical protein cypCar_00007863
|
GO:0010842P:retina layer formation GO:0030240P:skeletal muscle thin filament assembly |
- |
| 3329 |
SRR924332_primary_scf7180003073932_198-1028
Len: 830 bp
E-val: 3.6E-32
|
XP_016126487.1PREDICTED: LOW QUALITY PROTEIN: actin-binding LIM protein 2
|
GO:0007010P:cytoskeleton organization GO:0030032P:lamellipodium assembly GO:0046872F:metal ion binding GO:0051015F:actin filament binding GO:0005737C:cytoplasm GO:0015629C:actin cytoskeleton |
- |
| 3330 |
SRR924332_primary_scf7180003075032_1-980
Len: 979 bp
E-val: 3.8E-25
|
RXN06712.1E3 ubiquitin- ligase MYLIP
Ligases; Acyltransferases
|
GO:0006511P:ubiquitin-dependent protein catabolic process GO:0007369P:gastrulation GO:0016567P:protein ubiquitination GO:0030178P:negative regulation of Wnt signaling pathway GO:0004842F:ubiquitin-protein transferase activity GO:0005515F:protein binding GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0005829C:cytosol GO:0005856C:cytoskeleton |
EC:EC:6 EC:EC:2.3.2 |
| 3331 |
SRR924332_primary_scf7180003075666_189-968
Len: 779 bp
E-val: 1.1E-144
|
KTF79309.1hypothetical protein cypCar_00013717
|
GO:0005525F:GTP binding |
- |
| 3332 |
SRR924332_primary_scf7180003075697_242-897
Len: 655 bp
E-val: 2.5E-65
|
KTF71126.1hypothetical protein cypCar_00047402
|
GO:0004867F:serine-type endopeptidase inhibitor activity GO:0005615C:extracellular space GO:0005737C:cytoplasm |
- |
| 3333 |
SRR924332_primary_scf7180003076046_1-933
Len: 932 bp
E-val: 4.2E-29
|
KTF94211.1hypothetical protein cypCar_00034047
|
GO:0006869P:lipid transport GO:0015485F:cholesterol binding GO:0005829C:cytosol GO:0005886C:plasma membrane GO:0097038C:perinuclear endoplasmic reticulum |
- |
| 3334 |
SRR924332_primary_scf7180003077399_1-744
Len: 743 bp
E-val: 3.8E-17
|
XP_016141976.1PREDICTED: glucocorticoid modulatory element-binding protein 1-like
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0046872F:metal ion binding GO:0005634C:nucleus |
- |
| 3335 |
SRR924332_primary_scf7180003078975_419-976
Len: 557 bp
E-val: 1.5E-98
|
XP_016352623.1PREDICTED: arylamine N-acetyltransferase, pineal gland isozyme NAT-10-like
arylamine N-acetyltransferase
|
GO:0004060F:arylamine N-acetyltransferase activity |
EC:EC:2.3.1.5 |
| 3336 |
SRR924332_primary_scf7180003400960_1-1236
Len: 1,235 bp
E-val: 5.6E-90
|
KTG43299.1hypothetical protein cypCar_00010554
|
GO:0019226P:transmission of nerve impulse GO:0051968P:positive regulation of synaptic transmission, glutamatergic GO:0070588P:calcium ion transmembrane transport GO:0098943P:neurotransmitter receptor transport, postsynaptic endosome to lysosome GO:0098970P:postsynaptic neurotransmitter receptor diffusion trapping GO:0099590P:neurotransmitter receptor internalization GO:0005245F:voltage-gated calcium channel activity GO:0016247F:channel regulator activity GO:0005891C:voltage-gated calcium channel complex GO:0032281C:AMPA glutamate receptor complex GO:0098839C:postsynaptic density membrane |
- |
| 3337 |
SRR924332_primary_scf7180003401005_1-978
Len: 977 bp
E-val: 1.4E-64
|
KTG39376.1hypothetical protein cypCar_00000861
|
GO:0001501P:skeletal system development GO:0009987P:cellular process GO:0005737C:cytoplasm GO:0043231C:intracellular membrane-bounded organelle |
- |
| 3338 |
SRR924332_primary_scf7180003401044_1-673
Len: 672 bp
E-val: 4.7E-22
|
XP_018981983.1PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase IA-like
Glycosyltransferases; mannosyl-oligosaccharide 1,2-alpha-mannosidase; alpha-mannosidase
|
GO:0005975P:carbohydrate metabolic process GO:0004571F:mannosyl-oligosaccharide 1,2-alpha-mannosidase activity GO:0005509F:calcium ion binding GO:0008373F:sialyltransferase activity GO:0000139C:Golgi membrane GO:0005783C:endoplasmic reticulum GO:0070062C:extracellular exosome |
EC:EC:2.4.3 EC:EC:3.2.1.113 EC:EC:3.2.1.24 |
| 3339 |
SRR924332_primary_scf7180003401063_23-838
Len: 815 bp
E-val: 1.0E-132
|
KTG47431.1hypothetical protein cypCar_00016505
Hydrolases
|
GO:0016787F:hydrolase activity GO:0016020C:membrane |
EC:EC:3 |
| 3340 |
SRR924332_primary_scf7180003401078_1-810
Len: 809 bp
E-val: 1.4E-28
|
RXN11715.1ceramide kinase-like protein
|
GO:0006672P:ceramide metabolic process GO:0001729F:ceramide kinase activity GO:0016301F:kinase activity GO:0005575C:cellular_component GO:0016020C:membrane |
- |
| 3341 |
SRR924333_primary_scf7180001591117_2605-3252
Len: 647 bp
E-val: 1.9E-44
|
XP_017318440.1PREDICTED: uncharacterized protein LOC108262561
|
-
|
- |
| 3342 |
SRR924333_primary_scf7180001591146_949-3423
Len: 2,474 bp
E-val: 0.0
|
RXN21973.1Transposon Ty3-G Gag-Pol poly
|
GO:0007018P:microtubule-based movement GO:0015074P:DNA integration GO:0003676F:nucleic acid binding GO:0003824F:catalytic activity GO:0045505F:dynein intermediate chain binding GO:0051959F:dynein light intermediate chain binding GO:0030286C:dynein complex |
- |
| 3343 |
SRR924333_primary_scf7180001591159_1-5313
Len: 5,312 bp
E-val: 0.0
|
XP_026122188.1uncharacterized protein LOC113105364
Acting on peptide bonds (peptidases); RNA-directed DNA polymerase
|
GO:0006278P:RNA-templated DNA biosynthetic process GO:0006508P:proteolysis GO:0015074P:DNA integration GO:0003676F:nucleic acid binding GO:0003964F:RNA-directed DNA polymerase activity GO:0004190F:aspartic-type endopeptidase activity GO:0004519F:endonuclease activity GO:0008270F:zinc ion binding |
EC:EC:3.4.23 EC:EC:2.7.7.49 |
| 3344 |
SRR924333_primary_scf7180001591191_796-5217
Len: 4,421 bp
E-val: 0.0
|
XP_026122188.1uncharacterized protein LOC113105364
Acting on peptide bonds (peptidases); RNA-directed DNA polymerase
|
GO:0006278P:RNA-templated DNA biosynthetic process GO:0006508P:proteolysis GO:0015074P:DNA integration GO:0003676F:nucleic acid binding GO:0003964F:RNA-directed DNA polymerase activity GO:0004190F:aspartic-type endopeptidase activity GO:0004519F:endonuclease activity GO:0008270F:zinc ion binding |
EC:EC:3.4.23 EC:EC:2.7.7.49 |
| 3345 |
SRR924333_primary_scf7180001591223_1097-5824
Len: 4,727 bp
E-val: 0.0
|
XP_026100579.1uncharacterized protein LOC113071434
DNA helicase; DNA 3'-5' helicase; nucleoside-triphosphate phosphatase
|
GO:0000723P:telomere maintenance GO:0006281P:DNA repair GO:0006310P:DNA recombination GO:0004519F:endonuclease activity GO:0005524F:ATP binding GO:0009378F:four-way junction helicase activity GO:0016887F:ATP hydrolysis activity GO:0036121F:double-stranded DNA helicase activity GO:0061749F:forked DNA-dependent helicase activity GO:1990518F:single-stranded 3'-5' DNA helicase activity |
EC:EC:3.6.4.12 EC:EC:5.6.2.4 EC:EC:3.6.1.15 |
| 3346 |
SRR924333_primary_scf7180001591230_586-2990
Len: 2,404 bp
E-val: 4.2E-158
|
XP_005171740.2putative nuclease HARBI1 isoform X1
|
- | |
| 3347 |
SRR924333_primary_scf7180001591233_64-4325
Len: 4,261 bp
E-val: 0.0
|
XP_026074641.1uncharacterized protein LOC113053672
Acting on peptide bonds (peptidases)
|
GO:0006508P:proteolysis GO:0015074P:DNA integration GO:0003676F:nucleic acid binding GO:0004190F:aspartic-type endopeptidase activity GO:0004519F:endonuclease activity GO:0008270F:zinc ion binding |
EC:EC:3.4.23 |
| 3348 |
SRR924333_primary_scf7180001591233_4462-5094
Len: 632 bp
E-val: 3.9E-87
|
RXN30197.1Retrovirus-related Pol polyprotein from transposon 297
Acting on peptide bonds (peptidases); RNA-directed DNA polymerase
|
GO:0006278P:RNA-templated DNA biosynthetic process GO:0006508P:proteolysis GO:0015074P:DNA integration GO:0003676F:nucleic acid binding GO:0003964F:RNA-directed DNA polymerase activity GO:0004190F:aspartic-type endopeptidase activity GO:0004519F:endonuclease activity GO:0005525F:GTP binding GO:0008270F:zinc ion binding |
EC:EC:3.4.23 EC:EC:2.7.7.49 |
| 3349 |
SRR924333_primary_scf7180001591233_5137-6318
Len: 1,181 bp
E-val: 5.6E-79
|
RXN14231.1Retrovirus-related Pol polyprotein from transposon 297
|
GO:0015074P:DNA integration GO:0003676F:nucleic acid binding |
- |
| 3350 |
SRR924333_primary_scf7180001591234_1-6912
Len: 6,911 bp
E-val: 0.0
|
RXN23769.1Retrovirus-related Pol polyprotein from transposon 297
Acting on peptide bonds (peptidases); RNA-directed DNA polymerase
|
GO:0006278P:RNA-templated DNA biosynthetic process GO:0006508P:proteolysis GO:0015074P:DNA integration GO:0003676F:nucleic acid binding GO:0003964F:RNA-directed DNA polymerase activity GO:0004190F:aspartic-type endopeptidase activity GO:0004519F:endonuclease activity GO:0008270F:zinc ion binding |
EC:EC:3.4.23 EC:EC:2.7.7.49 |