Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 3401 |
SRR924334_primary_scf7180002196927_4368-4690
Len: 322 bp
E-val: 1.7E-22
|
ROL47989.1LINE-1 retrotransposable element ORF1 protein
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
- |
| 3402 |
SRR924334_primary_scf7180002196928_995-1954
Len: 959 bp
E-val: 8.8E-67
|
XP_018937315.1PREDICTED: dual specificity phosphatase DUPD1-like
protein-serine/threonine phosphatase
|
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0043409P:negative regulation of MAPK cascade GO:0008138F:protein tyrosine/serine/threonine phosphatase activity GO:0017018F:myosin phosphatase activity GO:0033192F:calmodulin-dependent protein phosphatase activity GO:0140791F:histone H2AXS139 phosphatase activity GO:0180004F:RNA polymerase II CTD heptapeptide repeat Y1 phosphatase activity GO:0180005F:RNA polymerase II CTD heptapeptide repeat T4 phosphatase activity GO:0180006F:RNA polymerase II CTD heptapeptide repeat S2 phosphatase activity GO:0180007F:RNA polymerase II CTD heptapeptide repeat S5 phosphatase activity GO:0180008F:RNA polymerase II CTD heptapeptide repeat S7 phosphatase activity GO:1990439F:MAP kinase serine/threonine phosphatase activity GO:0005737C:cytoplasm |
EC:EC:3.1.3.16 |
| 3403 |
SRR924334_primary_scf7180002196928_3103-3720
Len: 617 bp
E-val: 4.3E-107
|
XP_018974345.1PREDICTED: tomoregulin-1-like
|
-
|
- |
| 3404 |
SRR924334_primary_scf7180002196937_1-4749
Len: 4,748 bp
E-val: 1.1E-287
|
BAC82611.1pol-like protein
|
GO:0006260P:DNA replication GO:0006278P:RNA-templated DNA biosynthetic process GO:0071897P:DNA biosynthetic process GO:0000166F:nucleotide binding GO:0003676F:nucleic acid binding GO:0003677F:DNA binding GO:0003824F:catalytic activity GO:0003887F:DNA-directed DNA polymerase activity GO:0003964F:RNA-directed DNA polymerase activity GO:0008270F:zinc ion binding |
- |
| 3405 |
SRR924334_primary_scf7180002196965_1-2056
Len: 2,055 bp
E-val: 2.8E-78
|
XP_022540064.1putative nuclease HARBI1
|
GO:0005622C:intracellular anatomical structure |
- |
| 3406 |
SRR924334_primary_scf7180002197004_1-3671
Len: 3,670 bp
E-val: 0.0
|
XP_026076710.1uncharacterized protein LOC113055010
Acting on peptide bonds (peptidases); RNA-directed DNA polymerase
|
GO:0006278P:RNA-templated DNA biosynthetic process GO:0006508P:proteolysis GO:0015074P:DNA integration GO:0003676F:nucleic acid binding GO:0003964F:RNA-directed DNA polymerase activity GO:0004190F:aspartic-type endopeptidase activity GO:0004519F:endonuclease activity GO:0008270F:zinc ion binding |
EC:EC:3.4.23 EC:EC:2.7.7.49 |
| 3407 |
SRR924334_primary_scf7180002197125_87-1394
Len: 1,307 bp
E-val: 1.3E-214
|
XP_025760976.1uncharacterized protein K02A2.6-like
|
GO:0006259P:DNA metabolic process GO:0005488F:binding |
- |
| 3408 |
SRR924334_primary_scf7180002197125_1887-5466
Len: 3,579 bp
E-val: 0.0
|
XP_025756452.1uncharacterized protein K02A2.6-like
Acting on peptide bonds (peptidases)
|
GO:0006508P:proteolysis GO:0003676F:nucleic acid binding GO:0004190F:aspartic-type endopeptidase activity GO:0004519F:endonuclease activity GO:0008270F:zinc ion binding |
EC:EC:3.4.23 |
| 3409 |
SRR924334_primary_scf7180002197216_1208-2488
Len: 1,280 bp
E-val: 2.3E-251
|
XP_026103505.1piggyBac transposable element-derived protein 2-like
|
-
|
- |
| 3410 |
SRR924334_primary_scf7180002197221_1-1280
Len: 1,279 bp
E-val: 1.3E-65
|
XP_018946941.1PREDICTED: uncharacterized protein LOC109075501
|
GO:0005634C:nucleus GO:0016020C:membrane |
- |
| 3411 |
SRR924334_primary_scf7180002197282_262-708
Len: 446 bp
E-val: 5.2E-54
|
ROK54656.1DNA transposase THAP9
|
- | |
| 3412 |
SRR924334_primary_scf7180002197282_1218-1576
Len: 358 bp
E-val: 2.2E-26
|
ROK54656.1DNA transposase THAP9
Transferring phosphorus-containing groups
|
GO:0007346P:regulation of mitotic cell cycle GO:0043066P:negative regulation of apoptotic process GO:0003677F:DNA binding GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0005737C:cytoplasm GO:0016020C:membrane |
EC:EC:2.7.11 |
| 3413 |
SRR924334_primary_scf7180002197406_1215-5221
Len: 4,006 bp
E-val: 0.0
|
XP_026074641.1uncharacterized protein LOC113053672
Acting on peptide bonds (peptidases)
|
GO:0006508P:proteolysis GO:0015074P:DNA integration GO:0003676F:nucleic acid binding GO:0004190F:aspartic-type endopeptidase activity GO:0004519F:endonuclease activity GO:0008270F:zinc ion binding |
EC:EC:3.4.23 |
| 3414 |
SRR924334_primary_scf7180002197406_5358-7026
Len: 1,668 bp
E-val: 2.2E-174
|
XP_019203270.1uncharacterized protein LOC106097592
Acting on peptide bonds (peptidases); RNA-directed DNA polymerase
|
GO:0006278P:RNA-templated DNA biosynthetic process GO:0006508P:proteolysis GO:0015074P:DNA integration GO:0003676F:nucleic acid binding GO:0003964F:RNA-directed DNA polymerase activity GO:0004190F:aspartic-type endopeptidase activity GO:0004519F:endonuclease activity GO:0005525F:GTP binding GO:0008270F:zinc ion binding |
EC:EC:3.4.23 EC:EC:2.7.7.49 |
| 3415 |
SRR924334_primary_scf7180002197431_583-3104
Len: 2,521 bp
E-val: 4.9E-282
|
RXN09401.1SCAN domain-containing 3-like isoform X2
Acting on paired donors, with incorporation or reduction of molecular oxygen. The oxygen incorporated need not be derived from O2; Transferring one-carbon groups
|
GO:0008168F:methyltransferase activity GO:0016706F:2-oxoglutarate-dependent dioxygenase activity GO:0016020C:membrane |
EC:EC:1.14.11 EC:EC:2.1.1 |
| 3416 |
SRR924334_primary_scf7180002197439_878-2481
Len: 1,603 bp
E-val: 1.9E-58
|
XP_018935619.1PREDICTED: interleukin-1 beta-like
|
GO:0050794P:regulation of cellular process GO:0050896P:response to stimulus GO:0110165C:cellular anatomical structure |
- |
| 3417 |
SRR924334_primary_scf7180002197494_216-1746
Len: 1,530 bp
E-val: 1.8E-223
|
XP_016403936.1PREDICTED: uncharacterized protein F54H12.2-like
ribonucleoside-diphosphate reductase
|
GO:0009263P:deoxyribonucleotide biosynthetic process GO:0004748F:ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor GO:0005829C:cytosol |
EC:EC:1.17.4.1 |
| 3418 |
SRR924334_primary_scf7180002197596_256-1098
Len: 842 bp
E-val: 8.0E-88
|
RXN31220.1putative transposase element L1Md-A101/L1Md-A102/L1Md-A2
|
- | |
| 3419 |
SRR924334_primary_scf7180002197629_1555-1986
Len: 431 bp
E-val: 1.5E-69
|
KTG31512.1hypothetical protein cypCar_00048911
|
GO:0046983F:protein dimerization activity |
- |
| 3420 |
SRR924334_primary_scf7180002197745_1-957
Len: 956 bp
E-val: 2.0E-164
|
XP_026075420.1protocadherin beta-16-like
|
GO:0007156P:homophilic cell-cell adhesion GO:0009653P:anatomical structure morphogenesis GO:0005509F:calcium ion binding GO:0005886C:plasma membrane |
- |
| 3421 |
SRR924334_primary_scf7180002197804_1-2648
Len: 2,647 bp
E-val: 3.3E-265
|
KTG29440.1hypothetical protein cypCar_00040186, partial
|
GO:0046983F:protein dimerization activity |
- |
| 3422 |
SRR924334_primary_scf7180002197929_292-1233
Len: 941 bp
E-val: 2.2E-150
|
XP_026092897.1uncharacterized protein LOC113065665
|
-
|
- |
| 3423 |
SRR924334_primary_scf7180002197994_546-1617
Len: 1,071 bp
E-val: 3.3E-46
|
XP_026111198.1uncharacterized protein LOC113086373 isoform X2
|
GO:0005634C:nucleus |
- |
| 3424 |
SRR924334_primary_scf7180002198010_1-984
Len: 983 bp
E-val: 1.4E-184
|
XP_018944325.1PREDICTED: uncharacterized protein LOC109072540
|
GO:0015074P:DNA integration GO:0003676F:nucleic acid binding |
- |
| 3425 |
SRR924334_primary_scf7180002198124_1-2629
Len: 2,628 bp
E-val: 1.3E-205
|
XP_018942129.1PREDICTED: uncharacterized protein LOC109069977
|
GO:0005488F:binding |
- |