Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 3476 |
SRR924334_primary_scf7180002216835_1-518
Len: 517 bp
E-val: 2.0E-89
|
XP_018975748.1PREDICTED: forkhead box protein E1
|
GO:0001755P:neural crest cell migration GO:0003419P:growth plate cartilage chondrocyte proliferation GO:0006357P:regulation of transcription by RNA polymerase II GO:0048703P:embryonic viscerocranium morphogenesis GO:0061035P:regulation of cartilage development GO:1903010P:regulation of bone development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
- |
| 3477 |
SRR924334_primary_scf7180002216899_1-770
Len: 769 bp
E-val: 5.5E-35
|
KTG42090.1hypothetical protein cypCar_00010523
|
GO:0110165C:cellular anatomical structure |
- |
| 3478 |
SRR924334_primary_scf7180002217306_1-783
Len: 782 bp
E-val: 7.3E-35
|
XP_016336834.1PREDICTED: retinal guanylyl cyclase 2-like isoform X1
guanylate cyclase; nucleoside-triphosphate phosphatase
|
GO:0006182P:cGMP biosynthetic process GO:0007168P:receptor guanylyl cyclase signaling pathway GO:0001653F:peptide receptor activity GO:0003924F:GTPase activity GO:0004383F:guanylate cyclase activity GO:0032555F:purine ribonucleotide binding GO:0035639F:purine ribonucleoside triphosphate binding GO:0005886C:plasma membrane |
EC:EC:4.6.1.2 EC:EC:3.6.1.15 |
| 3479 |
SRR924334_primary_scf7180002217481_69-907
Len: 838 bp
E-val: 4.4E-38
|
XP_018966433.1PREDICTED: LOW QUALITY PROTEIN: interleukin-6 receptor subunit beta-like
|
GO:0048680P:positive regulation of axon regeneration GO:0016020C:membrane |
- |
| 3480 |
SRR924334_primary_scf7180002217684_1-1273
Len: 1,272 bp
E-val: 5.9E-42
|
NP_001005391.2clathrin, heavy polypeptide a
|
GO:0016192P:vesicle-mediated transport GO:0005905C:clathrin-coated pit GO:0030118C:clathrin coat GO:0030136C:clathrin-coated vesicle GO:0030659C:cytoplasmic vesicle membrane |
- |
| 3481 |
SRR924334_primary_scf7180002217876_1-976
Len: 975 bp
E-val: 6.5E-33
|
KTF75124.1hypothetical protein cypCar_00046746
|
GO:0098655P:monoatomic cation transmembrane transport GO:0005222F:intracellularly cAMP-activated cation channel activity GO:0005223F:intracellularly cGMP-activated cation channel activity GO:0030553F:cGMP binding GO:0044877F:protein-containing complex binding GO:0001750C:photoreceptor outer segment GO:0005886C:plasma membrane GO:0017071C:intracellular cyclic nucleotide activated cation channel complex |
- |
| 3482 |
SRR924334_primary_scf7180002218621_1-887
Len: 886 bp
E-val: 5.2E-29
|
XP_026134263.1inhibitor of nuclear factor kappa-B kinase subunit alpha
|
- | |
| 3483 |
SRR924334_primary_scf7180002218888_1-963
Len: 962 bp
E-val: 5.1E-38
|
XP_022530406.1glutamate receptor ionotropic, NMDA 2B-like isoform X1
|
GO:0034220P:monoatomic ion transmembrane transport GO:0035235P:ionotropic glutamate receptor signaling pathway GO:0035249P:synaptic transmission, glutamatergic GO:0060079P:excitatory postsynaptic potential GO:0060291P:long-term synaptic potentiation GO:0004972F:NMDA glutamate receptor activity GO:1904315F:transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential GO:0017146C:NMDA selective glutamate receptor complex GO:0098839C:postsynaptic density membrane |
- |
| 3484 |
SRR924334_primary_scf7180002218903_1-528
Len: 527 bp
E-val: 4.5E-89
|
XP_018944132.1PREDICTED: G protein-activated inward rectifier potassium channel 4-like
Acting on the CH-CH group of donors; protoporphyrinogen oxidase; Transferring one-carbon groups
|
GO:0006364P:rRNA processing GO:0006782P:protoporphyrinogen IX biosynthetic process GO:0007399P:nervous system development GO:0034765P:regulation of monoatomic ion transmembrane transport GO:1990573P:potassium ion import across plasma membrane GO:0003723F:RNA binding GO:0004729F:oxygen-dependent protoporphyrinogen oxidase activity GO:0008168F:methyltransferase activity GO:0015467F:G-protein activated inward rectifier potassium channel activity GO:0070819F:menaquinone-dependent protoporphyrinogen oxidase activity GO:0005886C:plasma membrane GO:0034702C:monoatomic ion channel complex |
EC:EC:1.3.5 EC:EC:1.3.3.4 EC:EC:2.1.1 |
| 3485 |
SRR924334_primary_scf7180002219620_85-849
Len: 764 bp
E-val: 8.2E-116
|
KTF90065.1hypothetical protein cypCar_00047054
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0016020C:membrane |
- |
| 3486 |
SRR924334_primary_scf7180002255047_1-685
Len: 684 bp
E-val: 2.9E-35
|
XP_018968615.1PREDICTED: hemoglobin subunit beta-like
Acting on a peroxide as acceptor
|
GO:0015671P:oxygen transport GO:0042744P:hydrogen peroxide catabolic process GO:0098869P:cellular oxidant detoxification GO:0004601F:peroxidase activity GO:0005344F:oxygen carrier activity GO:0019825F:oxygen binding GO:0020037F:heme binding GO:0031720F:haptoglobin binding GO:0043177F:organic acid binding GO:0046872F:metal ion binding GO:0005833C:hemoglobin complex GO:0031838C:haptoglobin-hemoglobin complex GO:0072562C:blood microparticle |
EC:EC:1.11.1 |
| 3487 |
SRR924334_primary_scf7180002255513_1-1115
Len: 1,114 bp
E-val: 4.0E-18
|
CAF97886.1unnamed protein product, partial
myosin ATPase
|
GO:0000281P:mitotic cytokinesis GO:0008360P:regulation of cell shape GO:0031032P:actomyosin structure organization GO:0000146F:microfilament motor activity GO:0005524F:ATP binding GO:0051015F:actin filament binding GO:0005737C:cytoplasm GO:0016460C:myosin II complex GO:0032982C:myosin filament |
EC:EC:5.6.1.8 |
| 3488 |
SRR924334_primary_scf7180002255966_507-1027
Len: 520 bp
E-val: 9.0E-74
|
XP_018962838.1PREDICTED: potassium channel subfamily K member 3-like
|
GO:0030322P:stabilization of membrane potential GO:0060047P:heart contraction GO:0071805P:potassium ion transmembrane transport GO:0005252F:open rectifier potassium channel activity GO:0015271F:outward rectifier potassium channel activity GO:0022841F:potassium ion leak channel activity GO:0005886C:plasma membrane |
- |
| 3489 |
SRR924334_primary_scf7180002259862_1-1039
Len: 1,038 bp
E-val: 2.5E-30
|
XP_026057780.1LOW QUALITY PROTEIN: contactin-1a-like
|
GO:0007411P:axon guidance GO:0007420P:brain development GO:0098609P:cell-cell adhesion GO:0098632F:cell-cell adhesion mediator activity GO:0005886C:plasma membrane GO:0030424C:axon GO:0098552C:side of membrane |
- |
| 3490 |
SRR924334_primary_scf7180002366702_329-702
Len: 373 bp
E-val: 1.5E-22
|
XP_026113055.1receptor tyrosine-protein kinase erbB-3-like
receptor protein-tyrosine kinase; nucleoside-triphosphate phosphatase
|
GO:0007173P:epidermal growth factor receptor signaling pathway GO:0008286P:insulin receptor signaling pathway GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0030182P:neuron differentiation GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0043066P:negative regulation of apoptotic process GO:0043410P:positive regulation of MAPK cascade GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0050679P:positive regulation of epithelial cell proliferation GO:0003924F:GTPase activity GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005524F:ATP binding GO:0005525F:GTP binding GO:0008288F:boss receptor activity GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0038131F:neuregulin receptor activity GO:0038132F:neuregulin binding GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0009925C:basal plasma membrane GO:0012505C:endomembrane system GO:0043235C:receptor complex |
EC:EC:2.7.10.1 EC:EC:3.6.1.15 |
| 3491 |
SRR924334_primary_scf7180002568780_1320-1569
Len: 249 bp
E-val: 1.5E-42
|
XP_026094481.1potassium voltage-gated channel subfamily C member 1-like isoform X2
|
GO:0001508P:action potential GO:0051260P:protein homooligomerization GO:0071805P:potassium ion transmembrane transport GO:0005251F:delayed rectifier potassium channel activity GO:0008076C:voltage-gated potassium channel complex GO:0032590C:dendrite membrane GO:0032809C:neuronal cell body membrane GO:0042734C:presynaptic membrane GO:0043679C:axon terminus GO:0045211C:postsynaptic membrane |
- |
| 3492 |
SRR924334_primary_scf7180002580238_312-1684
Len: 1,372 bp
E-val: 4.7E-170
|
XP_026121502.1uncharacterized protein LOC113101986 isoform X1
|
GO:0003676F:nucleic acid binding GO:0008270F:zinc ion binding |
- |
| 3493 |
SRR924334_primary_scf7180002580747_209-1136
Len: 927 bp
E-val: 1.2E-89
|
XP_018981751.1PREDICTED: zinc finger BED domain-containing protein 1-like isoform X1
|
GO:0005488F:binding |
- |
| 3494 |
SRR924335_final_scf7180000000156_1-2364
Len: 2,363 bp
E-val: 1.1E-12
|
KTG39369.1hypothetical protein cypCar_00000857
|
GO:0006537P:glutamate biosynthetic process GO:0006541P:glutamine metabolic process GO:0006543P:L-glutamine catabolic process GO:0004359F:glutaminase activity GO:0016787F:hydrolase activity |
- |
| 3495 |
SRR924335_final_scf7180000000169_604-1170
Len: 566 bp
E-val: 2.8E-97
|
XP_018941946.1PREDICTED: claudin-4-like
|
GO:0007155P:cell adhesion GO:0070830P:bicellular tight junction assembly GO:0005198F:structural molecule activity GO:0005886C:plasma membrane GO:0005923C:bicellular tight junction |
- |
| 3496 |
SRR924338_primary_scf7180002452006_486-3519
Len: 3,033 bp
E-val: 6.1E-255
|
XP_018919511.1PREDICTED: IgGFc-binding protein-like
|
GO:0005576C:extracellular region GO:0071944C:cell periphery |
- |
| 3497 |
SRR924338_primary_scf7180002452243_530-3211
Len: 2,681 bp
E-val: 0.0
|
XP_026184357.1LOW QUALITY PROTEIN: uncharacterized protein K02A2.6-like
RNA-directed DNA polymerase
|
GO:0006278P:RNA-templated DNA biosynthetic process GO:0015074P:DNA integration GO:0003676F:nucleic acid binding GO:0003964F:RNA-directed DNA polymerase activity GO:0004519F:endonuclease activity GO:0008270F:zinc ion binding |
EC:EC:2.7.7.49 |
| 3498 |
SRR924338_primary_scf7180002452262_427-6193
Len: 5,766 bp
E-val: 0.0
|
XP_018952198.1PREDICTED: uncharacterized protein LOC109081681
|
GO:0006259P:DNA metabolic process GO:0003824F:catalytic activity |
- |
| 3499 |
SRR924338_primary_scf7180002452316_1-800
Len: 799 bp
E-val: 3.1E-25
|
RXN31155.1dnaJ -like protein
|
GO:0006914P:autophagy GO:0005789C:endoplasmic reticulum membrane |
- |
| 3500 |
SRR924338_primary_scf7180002452502_1722-4188
Len: 2,466 bp
E-val: 7.5E-227
|
XP_026206277.1LOW QUALITY PROTEIN: uncharacterized protein LOC113155799
|
GO:0006259P:DNA metabolic process GO:0003824F:catalytic activity |
- |