Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 3751 |
SRR924338_primary_scf7180002461355_753-2042
Len: 1,289 bp
E-val: 1.1E-242
|
XP_018982106.1PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF139-like
Acyltransferases
|
GO:0036503P:ERAD pathway GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0008270F:zinc ion binding GO:0061630F:ubiquitin protein ligase activity GO:0036513C:Derlin-1 retrotranslocation complex |
EC:EC:2.3.2 |
| 3752 |
SRR924338_primary_scf7180002461362_1-903
Len: 902 bp
E-val: 7.9E-25
|
XP_016129836.1PREDICTED: protein sidekick-1-like
|
GO:0007411P:axon guidance GO:0098609P:cell-cell adhesion GO:0098632F:cell-cell adhesion mediator activity GO:0005886C:plasma membrane GO:0030424C:axon |
- |
| 3753 |
SRR924338_primary_scf7180002461405_1-2100
Len: 2,099 bp
E-val: 2.6E-26
|
KTF95532.1hypothetical protein cypCar_00019852
|
GO:0006986P:response to unfolded protein GO:0036503P:ERAD pathway GO:0005789C:endoplasmic reticulum membrane |
- |
| 3754 |
SRR924338_primary_scf7180002461406_1-723
Len: 722 bp
E-val: 3.9E-43
|
KTG43554.1hypothetical protein cypCar_00018966
|
GO:0005488F:binding GO:0005622C:intracellular anatomical structure |
- |
| 3755 |
SRR924338_primary_scf7180002461415_739-1815
Len: 1,076 bp
E-val: 4.8E-186
|
KTF80887.1hypothetical protein cypCar_00039946
|
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0007420P:brain development GO:0030182P:neuron differentiation GO:0045879P:negative regulation of smoothened signaling pathway GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0061386P:closure of optic fissure GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0005634C:nucleus |
- |
| 3756 |
SRR924338_primary_scf7180002461458_1-1916
Len: 1,915 bp
E-val: 8.5E-45
|
XP_026067846.1spectrin beta chain, non-erythrocytic 1-like isoform X3
|
GO:0051693P:actin filament capping GO:0003779F:actin binding GO:0005200F:structural constituent of cytoskeleton GO:0005543F:phospholipid binding GO:0008091C:spectrin GO:0016020C:membrane |
- |
| 3757 |
SRR924338_primary_scf7180002461485_1449-1902
Len: 453 bp
E-val: 1.6E-58
|
XP_026113063.1myosin-10 isoform X1
myosin ATPase
|
GO:0000281P:mitotic cytokinesis GO:0008360P:regulation of cell shape GO:0031032P:actomyosin structure organization GO:0048731P:system development GO:0000146F:microfilament motor activity GO:0005524F:ATP binding GO:0051015F:actin filament binding GO:0005737C:cytoplasm GO:0016460C:myosin II complex GO:0032982C:myosin filament |
EC:EC:5.6.1.8 |
| 3758 |
SRR924338_primary_scf7180002461567_817-2384
Len: 1,567 bp
E-val: 2.8E-171
|
XP_026132932.1early growth response protein 2b-like isoform X1
Ligases
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0021575P:hindbrain morphogenesis GO:0021654P:rhombomere boundary formation GO:0048568P:embryonic organ development GO:0048932P:myelination of posterior lateral line nerve axons GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0005634C:nucleus |
EC:EC:6 |
| 3759 |
SRR924338_primary_scf7180002461636_1-1079
Len: 1,078 bp
E-val: 2.0E-35
|
KTF75185.1hypothetical protein cypCar_00037710
|
-
|
- |
| 3760 |
SRR924338_primary_scf7180002461643_545-2448
Len: 1,903 bp
E-val: 2.4E-116
|
KTF94615.1hypothetical protein cypCar_00002291
|
GO:0005622C:intracellular anatomical structure |
- |
| 3761 |
SRR924338_primary_scf7180002461653_1-469
Len: 468 bp
E-val: 1.9E-22
|
KTF75012.1hypothetical protein cypCar_00036712
|
GO:1902476P:chloride transmembrane transport GO:0005247F:voltage-gated chloride channel activity GO:0005769C:early endosome GO:0005794C:Golgi apparatus GO:0005886C:plasma membrane GO:0008021C:synaptic vesicle GO:0010008C:endosome membrane |
- |
| 3762 |
SRR924338_primary_scf7180002461672_1-1540
Len: 1,539 bp
E-val: 9.9E-52
|
XP_018922031.1PREDICTED: LOW QUALITY PROTEIN: manganese-transporting ATPase 13A1-like
Catalysing the translocation of inorganic cations
|
GO:0006874P:intracellular calcium ion homeostasis GO:0055085P:transmembrane transport GO:0140569P:extraction of mislocalized protein from ER membrane GO:0015662F:P-type ion transporter activity GO:0019829F:ATPase-coupled monoatomic cation transmembrane transporter activity GO:0140567F:membrane protein dislocase activity GO:0005789C:endoplasmic reticulum membrane |
EC:EC:7.2.2 |
| 3763 |
SRR924338_primary_scf7180002461688_1-1797
Len: 1,796 bp
E-val: 1.7E-34
|
RXN19130.1POC1 centriolar -like protein
|
GO:0001895P:retina homeostasis GO:0003014P:renal system process GO:0007099P:centriole replication GO:0007507P:heart development GO:0007634P:optokinetic behavior GO:0010842P:retina layer formation GO:0060271P:cilium assembly GO:0060287P:epithelial cilium movement involved in determination of left/right asymmetry GO:0005576C:extracellular region GO:0005737C:cytoplasm GO:0005814C:centriole GO:0036064C:ciliary basal body |
- |
| 3764 |
SRR924338_primary_scf7180002461765_223-1944
Len: 1,721 bp
E-val: 1.9E-245
|
XP_016343593.1PREDICTED: serine/threonine-protein kinase TAO2-like isoform X1
Transferring phosphorus-containing groups
|
GO:0030901P:midbrain development GO:0032874P:positive regulation of stress-activated MAPK cascade GO:0046330P:positive regulation of JNK cascade GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0005737C:cytoplasm GO:0016020C:membrane |
EC:EC:2.7.11 |
| 3765 |
SRR924338_primary_scf7180002461770_1-1399
Len: 1,398 bp
E-val: 1.4E-17
|
KTG40063.1hypothetical protein cypCar_00002505
|
GO:0007411P:axon guidance GO:0009887P:animal organ morphogenesis GO:0009888P:tissue development GO:0030155P:regulation of cell adhesion GO:0030334P:regulation of cell migration GO:0045995P:regulation of embryonic development GO:0005102F:signaling receptor binding GO:0005201F:extracellular matrix structural constituent GO:0005576C:extracellular region GO:0005604C:basement membrane |
- |
| 3766 |
SRR924338_primary_scf7180002461772_355-1532
Len: 1,177 bp
E-val: 2.9E-104
|
KTF93719.1hypothetical protein cypCar_00039327
Acting on peptide bonds (peptidases)
|
GO:0006508P:proteolysis GO:0072378P:blood coagulation, fibrin clot formation GO:0004252F:serine-type endopeptidase activity GO:0005509F:calcium ion binding GO:0005615C:extracellular space |
EC:EC:3.4.21 |
| 3767 |
SRR924338_primary_scf7180002461776_1-998
Len: 997 bp
E-val: 3.6E-55
|
RXN14535.1piwi 1
|
GO:0007281P:germ cell development GO:0031047P:regulatory ncRNA-mediated gene silencing GO:0003676F:nucleic acid binding GO:0005622C:intracellular anatomical structure |
- |
| 3768 |
SRR924338_primary_scf7180002461782_1-894
Len: 893 bp
E-val: 6.7E-93
|
XP_018947141.1PREDICTED: vang-like protein 2
|
GO:0000132P:establishment of mitotic spindle orientation GO:0001736P:establishment of planar polarity GO:0001839P:neural plate morphogenesis GO:0001841P:neural tube formation GO:0007015P:actin filament organization GO:0014812P:muscle cell migration GO:0021535P:cell migration in hindbrain GO:0030198P:extracellular matrix organization GO:0033564P:anterior/posterior axon guidance GO:0035844P:cloaca development GO:0035845P:photoreceptor cell outer segment organization GO:0036342P:post-anal tail morphogenesis GO:0045813P:positive regulation of Wnt signaling pathway, calcium modulating pathway GO:0048048P:embryonic eye morphogenesis GO:0048570P:notochord morphogenesis GO:0048840P:otolith development GO:0048884P:neuromast development GO:0055002P:striated muscle cell development GO:0060028P:convergent extension involved in axis elongation GO:0060030P:dorsal convergence GO:0060071P:Wnt signaling pathway, planar cell polarity pathway GO:0060271P:cilium assembly GO:0060971P:embryonic heart tube left/right pattern formation GO:0071679P:commissural neuron axon guidance GO:0090090P:negative regulation of canonical Wnt signaling pathway GO:0097475P:motor neuron migration GO:0005515F:protein binding GO:0005886C:plasma membrane |
- |
| 3769 |
SRR924338_primary_scf7180002461782_1022-1309
Len: 287 bp
E-val: 1.9E-25
|
XP_018928838.1PREDICTED: uncharacterized protein LOC109056073
|
GO:0006278P:RNA-templated DNA biosynthetic process GO:0006897P:endocytosis GO:0008104P:intracellular protein localization GO:0042147P:retrograde transport, endosome to Golgi GO:0071897P:DNA biosynthetic process GO:0003964F:RNA-directed DNA polymerase activity GO:0005615C:extracellular space GO:0005794C:Golgi apparatus GO:0005829C:cytosol GO:0016020C:membrane GO:0030139C:endocytic vesicle |
- |
| 3770 |
SRR924338_primary_scf7180002461784_1-245
Len: 244 bp
E-val: 8.7E-19
|
RXN17002.1NEDD8-conjugating enzyme Ubc12
Acyltransferases
|
GO:0045116P:protein neddylation GO:0005524F:ATP binding GO:0019788F:NEDD8 transferase activity GO:0005634C:nucleus GO:0005829C:cytosol |
EC:EC:2.3.2 |
| 3771 |
SRR924338_primary_scf7180002461820_1403-1793
Len: 390 bp
E-val: 2.7E-14
|
KTF72770.1hypothetical protein cypCar_00028545
|
GO:0000184P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0043009P:chordate embryonic development GO:0042162F:telomeric DNA binding GO:0070034F:telomerase RNA binding GO:0005697C:telomerase holoenzyme complex GO:0005737C:cytoplasm |
- |
| 3772 |
SRR924338_primary_scf7180002461831_1-1316
Len: 1,315 bp
E-val: 1.8E-70
|
KTF93190.1hypothetical protein cypCar_00007383
Transferring one-carbon groups
|
GO:0006338P:chromatin remodeling GO:0006974P:DNA damage response GO:0008152P:metabolic process GO:0048523P:negative regulation of cellular process GO:0051726P:regulation of cell cycle GO:0060070P:canonical Wnt signaling pathway GO:0060729P:intestinal epithelial structure maintenance GO:0031151F:histone H3K79 methyltransferase activity GO:0043229C:intracellular organelle |
EC:EC:2.1.1 |
| 3773 |
SRR924338_primary_scf7180002461920_1-1073
Len: 1,072 bp
E-val: 1.3E-53
|
XP_016141217.1PREDICTED: chemokine-like receptor 1
|
GO:0002283P:neutrophil activation involved in immune response GO:0002430P:complement receptor mediated signaling pathway GO:0006954P:inflammatory response GO:0007200P:phospholipase C-activating G protein-coupled receptor signaling pathway GO:0007204P:positive regulation of cytosolic calcium ion concentration GO:0004875F:complement receptor activity GO:0004930F:G protein-coupled receptor activity GO:0005886C:plasma membrane |
- |
| 3774 |
SRR924338_primary_scf7180002461920_1148-1699
Len: 551 bp
E-val: 4.3E-98
|
KTG37866.1hypothetical protein cypCar_00029143
|
GO:0002283P:neutrophil activation involved in immune response GO:0002430P:complement receptor mediated signaling pathway GO:0006954P:inflammatory response GO:0007200P:phospholipase C-activating G protein-coupled receptor signaling pathway GO:0007204P:positive regulation of cytosolic calcium ion concentration GO:0004875F:complement receptor activity GO:0004930F:G protein-coupled receptor activity GO:0005886C:plasma membrane |
- |
| 3775 |
SRR924338_primary_scf7180002461963_1-1355
Len: 1,354 bp
E-val: 1.4E-121
|
XP_016331387.1PREDICTED: gamma-tubulin complex component 6
|
GO:0000278P:mitotic cell cycle GO:0007020P:microtubule nucleation GO:0023052P:signaling GO:0031122P:cytoplasmic microtubule organization GO:0051225P:spindle assembly GO:0051321P:meiotic cell cycle GO:0043015F:gamma-tubulin binding GO:0051011F:microtubule minus-end binding GO:0000922C:spindle pole GO:0000930C:gamma-tubulin complex GO:0005813C:centrosome GO:0005874C:microtubule GO:0010008C:endosome membrane |
- |