Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 3901 |
SRR924338_primary_scf7180002468705_292-1428
Len: 1,136 bp
E-val: 3.6E-144
|
QBG38716.1hepatocyte nuclear factor 3 beta
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007418P:ventral midline development GO:0007492P:endoderm development GO:0021779P:oligodendrocyte cell fate commitment GO:0032289P:central nervous system myelin formation GO:0033504P:floor plate development GO:0048319P:axial mesoderm morphogenesis GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0019904F:protein domain specific binding GO:0005634C:nucleus |
- |
| 3902 |
SRR924338_primary_scf7180002468776_1-1345
Len: 1,344 bp
E-val: 8.3E-55
|
KTF76434.1hypothetical protein cypCar_00007271
|
GO:0007165P:signal transduction GO:0007264P:small GTPase-mediated signal transduction GO:0004674F:protein serine/threonine kinase activity GO:0004692F:cGMP-dependent protein kinase activity GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005524F:ATP binding GO:0030553F:cGMP binding GO:0106310F:protein serine kinase activity |
- |
| 3903 |
SRR924338_primary_scf7180002468809_454-738
Len: 284 bp
E-val: 6.7E-39
|
XP_018938508.1PREDICTED: mpv17-like protein
|
- | |
| 3904 |
SRR924338_primary_scf7180002468809_790-1260
Len: 470 bp
E-val: 4.1E-33
|
KTF89846.1hypothetical protein cypCar_00048046, partial
|
- | |
| 3905 |
SRR924338_primary_scf7180002468882_1-1673
Len: 1,672 bp
E-val: 4.2E-48
|
XP_018970605.1PREDICTED: plexin-A1-like, partial
|
GO:0002072P:optic cup morphogenesis involved in camera-type eye development GO:0007416P:synapse assembly GO:0030334P:regulation of cell migration GO:0071526P:semaphorin-plexin signaling pathway GO:0097485P:neuron projection guidance GO:0017154F:semaphorin receptor activity GO:0002116C:semaphorin receptor complex GO:0005886C:plasma membrane |
- |
| 3906 |
SRR924338_primary_scf7180002468896_1-1391
Len: 1,390 bp
E-val: 3.6E-61
|
XP_026111463.1MAGUK p55 subfamily member 5-A-like
|
GO:0001841P:neural tube formation GO:0002011P:morphogenesis of an epithelial sheet GO:0008078P:mesodermal cell migration GO:0016332P:establishment or maintenance of polarity of embryonic epithelium GO:0021591P:ventricular system development GO:0021744P:dorsal motor nucleus of vagus nerve development GO:0035050P:embryonic heart tube development GO:0045176P:apical protein localization GO:0045199P:maintenance of epithelial cell apical/basal polarity GO:0048699P:generation of neurons GO:0055008P:cardiac muscle tissue morphogenesis GO:0060059P:embryonic retina morphogenesis in camera-type eye GO:0098609P:cell-cell adhesion GO:0001917C:photoreceptor inner segment GO:0005634C:nucleus GO:0005886C:plasma membrane GO:0043296C:apical junction complex |
- |
| 3907 |
SRR924338_primary_scf7180002468901_88-1360
Len: 1,272 bp
E-val: 3.2E-24
|
XP_016103467.1PREDICTED: rho GTPase-activating protein 15-like
|
GO:0007264P:small GTPase-mediated signal transduction GO:0005096F:GTPase activator activity GO:0005737C:cytoplasm GO:0005886C:plasma membrane |
- |
| 3908 |
SRR924338_primary_scf7180002468973_294-986
Len: 692 bp
E-val: 4.7E-118
|
XP_026086759.1thyrotropin-releasing hormone-degrading ectoenzyme-like
Acting on peptide bonds (peptidases)
|
GO:0006508P:proteolysis GO:0043171P:peptide catabolic process GO:0008270F:zinc ion binding GO:0042277F:peptide binding GO:0070006F:metalloaminopeptidase activity GO:0005615C:extracellular space GO:0005737C:cytoplasm GO:0016020C:membrane |
EC:EC:3.4.11 |
| 3909 |
SRR924338_primary_scf7180002469004_946-1900
Len: 954 bp
E-val: 1.8E-56
|
XP_016352481.1PREDICTED: elongation factor 1-alpha-like
|
GO:0006412P:translation GO:0006414P:translational elongation GO:0003746F:translation elongation factor activity GO:0003924F:GTPase activity GO:0005525F:GTP binding GO:0016787F:hydrolase activity GO:0005737C:cytoplasm |
- |
| 3910 |
SRR924338_primary_scf7180002469055_1-1193
Len: 1,192 bp
E-val: 2.4E-207
|
RXN19974.1netrin-1-like protein
|
GO:0008045P:motor neuron axon guidance GO:0009887P:animal organ morphogenesis GO:0009888P:tissue development GO:0016358P:dendrite development GO:0021960P:anterior commissure morphogenesis GO:0030516P:regulation of axon extension GO:0071678P:olfactory bulb axon guidance GO:2001240P:negative regulation of extrinsic apoptotic signaling pathway in absence of ligand GO:0005515F:protein binding GO:0005576C:extracellular region GO:0005604C:basement membrane |
- |
| 3911 |
SRR924338_primary_scf7180002469074_1-1070
Len: 1,069 bp
E-val: 9.5E-203
|
KTG06199.1hypothetical protein cypCar_00024006
glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-
|
GO:0003007P:heart morphogenesis GO:0008593P:regulation of Notch signaling pathway GO:0033339P:pectoral fin development GO:0050650P:chondroitin sulfate proteoglycan biosynthetic process GO:0060042P:retina morphogenesis in camera-type eye GO:0060536P:cartilage morphogenesis GO:0060876P:semicircular canal formation GO:0047238F:glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity GO:0032580C:Golgi cisterna membrane |
EC:EC:2.4.1.175 |
| 3912 |
SRR924338_primary_scf7180002469116_1-2196
Len: 2,195 bp
E-val: 7.2E-197
|
XP_016385063.1PREDICTED: caskin-1-like isoform X1
|
GO:0005737C:cytoplasm |
- |
| 3913 |
SRR924338_primary_scf7180002469120_1-1351
Len: 1,350 bp
E-val: 4.6E-21
|
XP_026107586.1usherin-like
|
GO:0007601P:visual perception GO:0007603P:phototransduction, visible light GO:0009888P:tissue development GO:0010506P:regulation of autophagy GO:0010996P:response to auditory stimulus GO:0045494P:photoreceptor cell maintenance GO:0046548P:retinal rod cell development GO:0046549P:retinal cone cell development GO:0048839P:inner ear development GO:0051648P:vesicle localization GO:0005604C:basement membrane GO:0016020C:membrane GO:0042995C:cell projection |
- |
| 3914 |
SRR924338_primary_scf7180002469124_1-1672
Len: 1,671 bp
E-val: 5.8E-82
|
XP_018949597.1PREDICTED: arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1-like isoform X1
|
GO:0043524P:negative regulation of neuron apoptotic process GO:0003924F:GTPase activity GO:0005096F:GTPase activator activity GO:0005525F:GTP binding GO:0008270F:zinc ion binding GO:0005634C:nucleus |
- |
| 3915 |
SRR924338_primary_scf7180002469125_1-1287
Len: 1,286 bp
E-val: 3.0E-54
|
XP_018962585.1PREDICTED: intelectin-like
|
GO:0030246F:carbohydrate binding GO:0046872F:metal ion binding GO:0070492F:oligosaccharide binding GO:0005615C:extracellular space |
- |
| 3916 |
SRR924338_primary_scf7180002469146_1-744
Len: 743 bp
E-val: 9.0E-35
|
KTG42203.1hypothetical protein cypCar_00042163, partial
|
GO:0007286P:spermatid development GO:0030719P:P granule organization GO:0141196P:transposable element silencing by piRNA-mediated DNA methylation GO:0033391C:chromatoid body GO:0071546C:pi-body |
- |
| 3917 |
SRR924338_primary_scf7180002469164_373-1158
Len: 785 bp
E-val: 1.6E-135
|
KTF85228.1hypothetical protein cypCar_00012808
Acyltransferases
|
GO:0016567P:protein ubiquitination GO:0008270F:zinc ion binding GO:0061630F:ubiquitin protein ligase activity |
EC:EC:2.3.2 |
| 3918 |
SRR924338_primary_scf7180002469193_1-1835
Len: 1,834 bp
E-val: 1.0E-50
|
KTG06054.1hypothetical protein cypCar_00005920
|
GO:0003729F:mRNA binding GO:0005829C:cytosol GO:0010494C:cytoplasmic stress granule GO:1990904C:ribonucleoprotein complex |
- |
| 3919 |
SRR924338_primary_scf7180002469246_1-292
Len: 291 bp
E-val: 7.4E-25
|
KTG32446.1hypothetical protein cypCar_00022407
Transferring phosphorus-containing groups
|
GO:0006338P:chromatin remodeling GO:0007411P:axon guidance GO:0004676F:3-phosphoinositide-dependent protein kinase activity GO:0004677F:DNA-dependent protein kinase activity GO:0004679F:AMP-activated protein kinase activity GO:0004694F:eukaryotic translation initiation factor 2alpha kinase activity GO:0004711F:ribosomal protein S6 kinase activity GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005524F:ATP binding GO:0035175F:histone H3S10 kinase activity GO:0035402F:histone H3T11 kinase activity GO:0035403F:histone H3T6 kinase activity GO:0035979F:histone H2AXS139 kinase activity GO:0044022F:histone H3S28 kinase activity GO:0044023F:histone H4S1 kinase activity GO:0044024F:histone H2AS1 kinase activity GO:0044025F:histone H2BS14 kinase activity GO:0072354F:histone H3T3 kinase activity GO:0072518F:Rho-dependent protein serine/threonine kinase activity GO:0140823F:histone H2BS36 kinase activity GO:0140855F:histone H3S57 kinase activity GO:0140857F:histone H3T45 kinase activity GO:1990244F:histone H2AT120 kinase activity GO:0005737C:cytoplasm GO:0005886C:plasma membrane GO:0019898C:extrinsic component of membrane |
EC:EC:2.7.11 |
| 3920 |
SRR924338_primary_scf7180002469302_126-1028
Len: 902 bp
E-val: 9.0E-21
|
XP_018967453.1PREDICTED: protein diaphanous homolog 3-like
|
GO:0030041P:actin filament polymerization GO:0003779F:actin binding GO:0031267F:small GTPase binding GO:0005884C:actin filament |
- |
| 3921 |
SRR924338_primary_scf7180002469315_1-275
Len: 274 bp
E-val: 7.2E-14
|
XP_026066527.1spectrin beta chain, non-erythrocytic 4-like
|
GO:0051693P:actin filament capping GO:0005543F:phospholipid binding GO:0051015F:actin filament binding GO:0005886C:plasma membrane GO:0030054C:cell junction GO:0030864C:cortical actin cytoskeleton GO:0042995C:cell projection |
- |
| 3922 |
SRR924338_primary_scf7180002469322_1281-2087
Len: 806 bp
E-val: 3.1E-129
|
KTG34216.1hypothetical protein cypCar_00024406
|
GO:0015031P:protein transport GO:0016197P:endosomal transport GO:0005765C:lysosomal membrane GO:0030119C:AP-type membrane coat adaptor complex |
- |
| 3923 |
SRR924338_primary_scf7180002469329_1-1236
Len: 1,235 bp
E-val: 4.1E-48
|
KTF88559.1hypothetical protein cypCar_00037400
|
GO:0003677F:DNA binding GO:0003723F:RNA binding GO:0003729F:mRNA binding GO:0005634C:nucleus GO:0005730C:nucleolus |
- |
| 3924 |
SRR924338_primary_scf7180002469341_62-932
Len: 870 bp
E-val: 1.9E-28
|
XP_026100131.1FK506-binding protein 15-like isoform X1
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0003755F:peptidyl-prolyl cis-trans isomerase activity GO:0016853F:isomerase activity GO:0140839F:RNA polymerase II CTD heptapeptide repeat P3 isomerase activity GO:0140840F:RNA polymerase II CTD heptapeptide repeat P6 isomerase activity GO:0030426C:growth cone |
- |
| 3925 |
SRR924338_primary_scf7180002469361_329-1785
Len: 1,456 bp
E-val: 9.0E-63
|
KTG40200.1hypothetical protein cypCar_00007851
|
GO:0099041P:vesicle tethering to Golgi GO:0005802C:trans-Golgi network |
- |