Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 4001 |
SRR924338_primary_scf7180002471574_1-1180
Len: 1,179 bp
E-val: 1.7E-96
|
XP_018940416.1PREDICTED: lipoxygenase homology domain-containing protein 1-like
|
GO:0006486P:obsolete protein glycosylation GO:0008373F:sialyltransferase activity GO:0016757F:glycosyltransferase activity GO:0000139C:Golgi membrane GO:0005794C:Golgi apparatus GO:0016020C:membrane |
- |
| 4002 |
SRR924338_primary_scf7180002471580_1-1211
Len: 1,210 bp
E-val: 2.3E-35
|
XP_695887.5splicing factor, arginine/serine-rich 15
|
GO:2000805P:negative regulation of termination of RNA polymerase II transcription, poly(A)-coupled GO:0003723F:RNA binding GO:1990269F:RNA polymerase II C-terminal domain phosphoserine binding GO:0005634C:nucleus |
- |
| 4003 |
SRR924338_primary_scf7180002471592_1-1284
Len: 1,283 bp
E-val: 5.1E-118
|
ROL48585.1Protein transport protein Sec31A
|
GO:0016192P:vesicle-mediated transport GO:0005783C:endoplasmic reticulum GO:0031090C:organelle membrane GO:0031410C:cytoplasmic vesicle |
- |
| 4004 |
SRR924338_primary_scf7180002471596_1-1193
Len: 1,192 bp
E-val: 5.3E-85
|
KTG39489.1hypothetical protein cypCar_00043058
|
GO:0048513P:animal organ development GO:0031462C:Cul2-RING ubiquitin ligase complex |
- |
| 4005 |
SRR924338_primary_scf7180002471636_497-1411
Len: 914 bp
E-val: 1.8E-165
|
KTF90171.1hypothetical protein cypCar_00011568, partial
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
- |
| 4006 |
SRR924338_primary_scf7180002471746_1-1036
Len: 1,035 bp
E-val: 2.7E-162
|
XP_018974066.1PREDICTED: probable G-protein coupled receptor 142 isoform X1
|
GO:0007186P:G protein-coupled receptor signaling pathway GO:0004930F:G protein-coupled receptor activity GO:0005886C:plasma membrane |
- |
| 4007 |
SRR924338_primary_scf7180002471757_197-1059
Len: 862 bp
E-val: 5.0E-45
|
XP_018960990.1PREDICTED: LOW QUALITY PROTEIN: dynein heavy chain 10, axonemal-like, partial
Isomerases altering macromolecular conformation
|
GO:0007368P:determination of left/right symmetry GO:0060294P:cilium movement involved in cell motility GO:0008569F:minus-end-directed microtubule motor activity GO:0045505F:dynein intermediate chain binding GO:0051959F:dynein light intermediate chain binding GO:0030286C:dynein complex GO:0097729C:9+2 motile cilium |
EC:EC:5.6.1 |
| 4008 |
SRR924338_primary_scf7180002471839_1-1177
Len: 1,176 bp
E-val: 1.3E-149
|
KTG39522.1hypothetical protein cypCar_00046164
|
GO:2000766P:negative regulation of cytoplasmic translation GO:0000900F:mRNA regulatory element binding translation repressor activity GO:0003730F:mRNA 3'-UTR binding GO:0008135F:translation factor activity, RNA binding GO:0043022F:ribosome binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0043005C:neuron projection GO:0045202C:synapse |
- |
| 4009 |
SRR924338_primary_scf7180002471907_1-790
Len: 789 bp
E-val: 8.8E-105
|
XP_018967052.1PREDICTED: protein shisa-6 homolog isoform X1
|
GO:0048172P:regulation of short-term neuronal synaptic plasticity GO:0014069C:postsynaptic density GO:0032281C:AMPA glutamate receptor complex GO:0032591C:dendritic spine membrane GO:0045211C:postsynaptic membrane |
- |
| 4010 |
SRR924338_primary_scf7180002471962_46-957
Len: 911 bp
E-val: 3.2E-175
|
XP_018930409.1PREDICTED: XK-related protein 6-like, partial
|
GO:0043652P:engulfment of apoptotic cell GO:0070782P:phosphatidylserine exposure on apoptotic cell surface GO:1902742P:apoptotic process involved in development GO:0005886C:plasma membrane |
- |
| 4011 |
SRR924338_primary_scf7180002471996_214-945
Len: 731 bp
E-val: 2.7E-132
|
XP_018919773.1PREDICTED: beta-1,3-galactosyltransferase 1-like
N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase
|
GO:0006493P:protein O-linked glycosylation GO:0008499F:N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase activity GO:0000139C:Golgi membrane |
EC:EC:2.4.1.86 |
| 4012 |
SRR924338_primary_scf7180002472040_1-517
Len: 516 bp
E-val: 2.4E-10
|
KTG06292.1hypothetical protein cypCar_00040697
|
GO:0015031P:protein transport GO:0032509P:endosome transport via multivesicular body sorting pathway GO:0045324P:late endosome to vacuole transport GO:0000815C:ESCRT III complex GO:0005771C:multivesicular body GO:0005829C:cytosol GO:0031902C:late endosome membrane |
- |
| 4013 |
SRR924338_primary_scf7180002472172_1-1159
Len: 1,158 bp
E-val: 3.8E-72
|
XP_018979521.1PREDICTED: S-adenosylmethionine synthase-like
|
GO:0006556P:S-adenosylmethionine biosynthetic process GO:0006730P:one-carbon metabolic process GO:0004478F:methionine adenosyltransferase activity GO:0005524F:ATP binding GO:0016740F:transferase activity GO:0046872F:metal ion binding |
- |
| 4014 |
SRR924338_primary_scf7180002472371_265-1471
Len: 1,206 bp
E-val: 8.1E-17
|
XP_016149154.1PREDICTED: UBX domain-containing protein 1-like
|
GO:0031397P:negative regulation of protein ubiquitination GO:0032435P:negative regulation of proteasomal ubiquitin-dependent protein catabolic process GO:1903094P:negative regulation of protein K48-linked deubiquitination GO:0036435F:K48-linked polyubiquitin modification-dependent protein binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
- |
| 4015 |
SRR924338_primary_scf7180002472412_1-938
Len: 937 bp
E-val: 3.8E-30
|
XP_018969936.1PREDICTED: LOW QUALITY PROTEIN: probable methyltransferase TARBP1
Transferring one-carbon groups
|
GO:0030488P:tRNA methylation GO:0003723F:RNA binding GO:0016423F:tRNA (guanine) methyltransferase activity |
EC:EC:2.1.1 |
| 4016 |
SRR924338_primary_scf7180002472426_1-754
Len: 753 bp
E-val: 7.3E-24
|
KTF87803.1hypothetical protein cypCar_00006961
|
GO:0006783P:heme biosynthetic process GO:1990542P:mitochondrial transmembrane transport GO:0046872F:metal ion binding GO:0051537F:2 iron, 2 sulfur cluster binding GO:0005743C:mitochondrial inner membrane |
- |
| 4017 |
SRR924338_primary_scf7180002472469_37-975
Len: 938 bp
E-val: 1.7E-179
|
XP_018955956.1PREDICTED: uncharacterized protein LOC109085922
|
GO:0003824F:catalytic activity |
- |
| 4018 |
SRR924338_primary_scf7180002472560_1-619
Len: 618 bp
E-val: 4.8E-58
|
KTF87826.1hypothetical protein cypCar_00033701
|
GO:0003015P:heart process GO:0030322P:stabilization of membrane potential GO:0071805P:potassium ion transmembrane transport GO:0015271F:outward rectifier potassium channel activity GO:0022841F:potassium ion leak channel activity GO:0016324C:apical plasma membrane GO:0030425C:dendrite GO:0043204C:perikaryon GO:0055037C:recycling endosome GO:0097060C:synaptic membrane |
- |
| 4019 |
SRR924338_primary_scf7180002472563_1-1754
Len: 1,753 bp
E-val: 4.3E-11
|
XP_016145583.1PREDICTED: protein scribble homolog isoform X1
|
GO:0009987P:cellular process GO:0110165C:cellular anatomical structure |
- |
| 4020 |
SRR924338_primary_scf7180002472611_1-1060
Len: 1,059 bp
E-val: 1.1E-97
|
XP_016321472.1PREDICTED: collagen alpha-1(XXVIII) chain-like
|
GO:0007155P:cell adhesion GO:0030198P:extracellular matrix organization GO:0004867F:serine-type endopeptidase inhibitor activity GO:0030020F:extracellular matrix structural constituent conferring tensile strength GO:0005594C:collagen type IX trimer GO:0005615C:extracellular space |
- |
| 4021 |
SRR924338_primary_scf7180002472672_66-746
Len: 680 bp
E-val: 6.4E-128
|
XP_018943825.1PREDICTED: tumor necrosis factor receptor superfamily member 21-like
|
GO:0002040P:sprouting angiogenesis GO:0002250P:adaptive immune response GO:0006959P:humoral immune response GO:0007165P:signal transduction GO:0014045P:establishment of endothelial blood-brain barrier GO:0030889P:negative regulation of B cell proliferation GO:0031642P:negative regulation of myelination GO:0042130P:negative regulation of T cell proliferation GO:0051402P:neuron apoptotic process GO:0097252P:oligodendrocyte apoptotic process GO:0005886C:plasma membrane |
- |
| 4022 |
SRR924338_primary_scf7180002472689_350-1332
Len: 982 bp
E-val: 1.2E-111
|
KTF89318.1hypothetical protein cypCar_00041352
|
- | |
| 4023 |
SRR924338_primary_scf7180002472712_317-1300
Len: 983 bp
E-val: 2.6E-178
|
XP_018960587.1PREDICTED: uncharacterized protein LOC109091279
|
GO:0007218P:neuropeptide signaling pathway GO:0008528F:G protein-coupled peptide receptor activity GO:0005886C:plasma membrane |
- |
| 4024 |
SRR924338_primary_scf7180002472777_1-1296
Len: 1,295 bp
E-val: 8.7E-25
|
CAG00468.1unnamed protein product
Transferring phosphorus-containing groups; sphingomyelin phosphodiesterase
|
GO:0006685P:sphingomyelin catabolic process GO:0007160P:cell-matrix adhesion GO:0007229P:integrin-mediated signaling pathway GO:0034446P:substrate adhesion-dependent cell spreading GO:0046513P:ceramide biosynthetic process GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0046872F:metal ion binding GO:0061750F:acid sphingomyelin phosphodiesterase activity GO:0001725C:stress fiber GO:0005615C:extracellular space GO:0005764C:lysosome GO:0005886C:plasma membrane GO:0005925C:focal adhesion GO:0005938C:cell cortex GO:0030017C:sarcomere GO:0030027C:lamellipodium |
EC:EC:2.7.11 EC:EC:3.1.4.12 |
| 4025 |
SRR924338_primary_scf7180002472816_1-725
Len: 724 bp
E-val: 1.8E-40
|
XP_018970891.1PREDICTED: glutamate receptor 3-like
|
GO:0034220P:monoatomic ion transmembrane transport GO:0035235P:ionotropic glutamate receptor signaling pathway GO:0035249P:synaptic transmission, glutamatergic GO:0050804P:modulation of chemical synaptic transmission GO:0060078P:regulation of postsynaptic membrane potential GO:0004971F:AMPA glutamate receptor activity GO:1904315F:transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential GO:0032281C:AMPA glutamate receptor complex GO:0043197C:dendritic spine GO:0098839C:postsynaptic density membrane |
- |