Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 4276 |
SRR924338_primary_scf7180002487799_1-891
Len: 890 bp
E-val: 4.4E-129
|
KTF96916.1hypothetical protein cypCar_00008630
polynucleotide 5'-hydroxyl-kinase
|
GO:0006388P:tRNA splicing, via endonucleolytic cleavage and ligation GO:0021522P:spinal cord motor neuron differentiation GO:0021695P:cerebellar cortex development GO:0031124P:mRNA 3'-end processing GO:0070922P:RISC complex assembly GO:0005524F:ATP binding GO:0046404F:ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity GO:0051736F:ATP-dependent polyribonucleotide 5'-hydroxyl-kinase activity GO:0000214C:tRNA-intron endonuclease complex GO:0005849C:mRNA cleavage factor complex |
EC:EC:2.7.1.78 |
| 4277 |
SRR924338_primary_scf7180002487805_212-565
Len: 353 bp
E-val: 4.0E-33
|
KTF79136.1hypothetical protein cypCar_00028423, partial
|
GO:0070507P:regulation of microtubule cytoskeleton organization GO:0045180C:basal cortex |
- |
| 4278 |
SRR924338_primary_scf7180002487836_249-1032
Len: 783 bp
E-val: 6.4E-31
|
XP_026143244.1multiple epidermal growth factor-like domains protein 11 isoform X3
|
GO:0007157P:heterophilic cell-cell adhesion GO:0016192P:vesicle-mediated transport GO:0005044F:scavenger receptor activity GO:0008270F:zinc ion binding GO:0005886C:plasma membrane |
- |
| 4279 |
SRR924338_primary_scf7180002487873_564-1576
Len: 1,012 bp
E-val: 1.6E-34
|
KTG06401.1hypothetical protein cypCar_00043709
Ligases; Acyltransferases
|
GO:0000209P:protein polyubiquitination GO:0006515P:protein quality control for misfolded or incompletely synthesized proteins GO:0021693P:cerebellar Purkinje cell layer structural organization GO:0031943P:regulation of glucocorticoid metabolic process GO:0032436P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process GO:0071218P:cellular response to misfolded protein GO:0016874F:ligase activity GO:0030544F:Hsp70 protein binding GO:0030911F:TPR domain binding GO:0051879F:Hsp90 protein binding GO:0061630F:ubiquitin protein ligase activity GO:0030018C:Z disc |
EC:EC:6 EC:EC:2.3.2 |
| 4280 |
SRR924338_primary_scf7180002487930_1-1031
Len: 1,030 bp
E-val: 3.1E-17
|
XP_026139690.1RNA binding protein fox-1 homolog 1-like
|
GO:0003015P:heart process GO:0043484P:regulation of RNA splicing GO:0048741P:skeletal muscle fiber development GO:0055013P:cardiac muscle cell development GO:0003723F:RNA binding GO:0005634C:nucleus |
- |
| 4281 |
SRR924338_primary_scf7180002487941_1-652
Len: 651 bp
E-val: 4.1E-23
|
XP_026102695.1cyclin-dependent kinase 16-like isoform X1
|
GO:0006364P:rRNA processing GO:0006887P:exocytosis GO:0031175P:neuron projection development GO:0051726P:regulation of cell cycle GO:0004672F:protein kinase activity GO:0004674F:protein serine/threonine kinase activity GO:0004693F:cyclin-dependent protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0008021C:synaptic vesicle |
- |
| 4282 |
SRR924338_primary_scf7180002487946_1-738
Len: 737 bp
E-val: 5.4E-24
|
KTF83608.1hypothetical protein cypCar_00027178
pyruvate dehydrogenase (acetyl-transferring)
|
GO:0006006P:glucose metabolic process GO:0006086P:pyruvate decarboxylation to acetyl-CoA GO:0004739F:pyruvate dehydrogenase (acetyl-transferring) activity GO:0043231C:intracellular membrane-bounded organelle |
EC:EC:1.2.4.1 |
| 4283 |
SRR924338_primary_scf7180002487977_328-843
Len: 515 bp
E-val: 2.9E-48
|
XP_016353364.1PREDICTED: WD repeat-containing protein 26-like
|
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0005634C:nucleus GO:0005739C:mitochondrion GO:0034657C:GID complex |
- |
| 4284 |
SRR924338_primary_scf7180002488032_1-481
Len: 480 bp
E-val:
|
-
|
-
|
- |
| 4285 |
SRR924338_primary_scf7180002488087_1-293
Len: 292 bp
E-val: 5.9E-22
|
KTG06841.1hypothetical protein cypCar_00023577
receptor protein-tyrosine kinase
|
GO:0007156P:homophilic cell-cell adhesion GO:0007411P:axon guidance GO:0050808P:synapse organization GO:0004714F:transmembrane receptor protein tyrosine kinase activity GO:0005524F:ATP binding GO:0008046F:axon guidance receptor activity GO:0046872F:metal ion binding GO:0005886C:plasma membrane GO:0030424C:axon GO:0043025C:neuronal cell body |
EC:EC:2.7.10.1 |
| 4286 |
SRR924338_primary_scf7180002488167_1-630
Len: 629 bp
E-val: 7.1E-33
|
XP_026064074.1serine/threonine-protein phosphatase alpha-2 isoform
protein-serine/threonine phosphatase
|
GO:0005977P:glycogen metabolic process GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0051301P:cell division GO:0060026P:convergent extension GO:0017018F:myosin phosphatase activity GO:0033192F:calmodulin-dependent protein phosphatase activity GO:0140791F:histone H2AXS139 phosphatase activity GO:0180004F:RNA polymerase II CTD heptapeptide repeat Y1 phosphatase activity GO:0180005F:RNA polymerase II CTD heptapeptide repeat T4 phosphatase activity GO:0180006F:RNA polymerase II CTD heptapeptide repeat S2 phosphatase activity GO:0180007F:RNA polymerase II CTD heptapeptide repeat S5 phosphatase activity GO:0180008F:RNA polymerase II CTD heptapeptide repeat S7 phosphatase activity GO:1990439F:MAP kinase serine/threonine phosphatase activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
EC:EC:3.1.3.16 |
| 4287 |
SRR924338_primary_scf7180002488216_1-1483
Len: 1,482 bp
E-val: 4.6E-179
|
KTF86251.1hypothetical protein cypCar_00038984
|
- | |
| 4288 |
SRR924338_primary_scf7180002488267_1-923
Len: 922 bp
E-val: 1.6E-86
|
KTG03095.1hypothetical protein cypCar_00009699
|
GO:0016567P:protein ubiquitination GO:0031146P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process GO:0005737C:cytoplasm GO:0005813C:centrosome GO:0019005C:SCF ubiquitin ligase complex |
- |
| 4289 |
SRR924338_primary_scf7180002488293_1-677
Len: 676 bp
E-val: 3.5E-25
|
XP_026098282.1GATA-binding factor 2-like isoform X3
|
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0003190P:atrioventricular valve formation GO:0021514P:ventral spinal cord interneuron differentiation GO:0035912P:dorsal aorta morphogenesis GO:0045165P:cell fate commitment GO:0045766P:positive regulation of angiogenesis GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048821P:erythrocyte development GO:0060215P:primitive hemopoiesis GO:1902895P:positive regulation of miRNA transcription GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
- |
| 4290 |
SRR924338_primary_scf7180002488358_1-1234
Len: 1,233 bp
E-val: 5.8E-212
|
XP_018974248.1PREDICTED: RNA-binding protein MEX3B-like
Transferring phosphorus-containing groups
|
GO:0003723F:RNA binding GO:0004672F:protein kinase activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
EC:EC:2.7.1 |
| 4291 |
SRR924338_primary_scf7180002488361_1-1129
Len: 1,128 bp
E-val: 1.5E-41
|
RXN39038.1protocadherin Fat 3-like protein
|
GO:0007156P:homophilic cell-cell adhesion GO:0016477P:cell migration GO:0031175P:neuron projection development GO:0060536P:cartilage morphogenesis GO:0005509F:calcium ion binding GO:0008013F:beta-catenin binding GO:0045296F:cadherin binding GO:0016342C:catenin complex |
- |
| 4292 |
SRR924338_primary_scf7180002488447_1-980
Len: 979 bp
E-val: 4.4E-21
|
XP_016085976.1PREDICTED: fibronectin-like
|
GO:0006953P:acute-phase response GO:0007044P:cell-substrate junction assembly GO:0007160P:cell-matrix adhesion GO:0007399P:nervous system development GO:0007507P:heart development GO:0008360P:regulation of cell shape GO:0005178F:integrin binding GO:0005201F:extracellular matrix structural constituent GO:0008201F:heparin binding GO:0043394F:proteoglycan binding GO:0005615C:extracellular space |
- |
| 4293 |
SRR924338_primary_scf7180002488464_1-782
Len: 781 bp
E-val: 1.7E-31
|
KTG39196.1hypothetical protein cypCar_00019907
Transferring sulfur-containing groups; Transferring sulfur-containing groups
|
GO:0051923P:sulfation GO:0008146F:sulfotransferase activity GO:0016783F:sulfurtransferase activity GO:0005737C:cytoplasm |
EC:EC:2.8.1 EC:EC:2.8.2 |
| 4294 |
SRR924338_primary_scf7180002488473_260-669
Len: 409 bp
E-val: 9.4E-26
|
KTG41141.1hypothetical protein cypCar_00000007
|
GO:0005886C:plasma membrane GO:0005911C:cell-cell junction |
- |
| 4295 |
SRR924338_primary_scf7180002488528_1-832
Len: 831 bp
E-val: 1.4E-132
|
XP_018948874.1PREDICTED: protein phosphatase 1 regulatory subunit 3D-like
|
GO:0005979P:regulation of glycogen biosynthetic process GO:0008157F:protein phosphatase 1 binding GO:2001069F:glycogen binding GO:0000164C:protein phosphatase type 1 complex |
- |
| 4296 |
SRR924338_primary_scf7180002488533_259-1209
Len: 950 bp
E-val: 4.8E-174
|
XP_018970048.1PREDICTED: PWWP domain-containing protein 2B-like isoform X1
|
- | |
| 4297 |
SRR924338_primary_scf7180002488568_1-1269
Len: 1,268 bp
E-val: 9.0E-51
|
XP_018970232.1PREDICTED: inactive tyrosine-protein kinase 7-like
Transferring phosphorus-containing groups
|
GO:0007156P:homophilic cell-cell adhesion GO:0007411P:axon guidance GO:0050808P:synapse organization GO:0070593P:dendrite self-avoidance GO:0004713F:protein tyrosine kinase activity GO:0005524F:ATP binding GO:0008046F:axon guidance receptor activity GO:0046872F:metal ion binding GO:0098632F:cell-cell adhesion mediator activity GO:0005886C:plasma membrane GO:0030424C:axon GO:0043025C:neuronal cell body |
EC:EC:2.7.10 |
| 4298 |
SRR924338_primary_scf7180002488666_652-1106
Len: 454 bp
E-val: 1.0E-28
|
KTF94005.1hypothetical protein cypCar_00020032
|
GO:0001841P:neural tube formation GO:0030917P:midbrain-hindbrain boundary development GO:0034454P:microtubule anchoring at centrosome GO:0051642P:centrosome localization GO:0090222P:centrosome-templated microtubule nucleation GO:0005509F:calcium ion binding GO:0000242C:pericentriolar material GO:0005737C:cytoplasm GO:0005814C:centriole GO:0097431C:mitotic spindle pole GO:0097539C:ciliary transition fiber |
- |
| 4299 |
SRR924338_primary_scf7180002488703_1-1728
Len: 1,727 bp
E-val: 1.3E-28
|
XP_018922537.1PREDICTED: lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma-like isoform X3
Acting on carbon-nitrogen bonds, other than peptide bonds; Acting on peptide bonds (peptidases)
|
GO:0006508P:proteolysis GO:0006520P:amino acid metabolic process GO:0043604P:amide biosynthetic process GO:0043605P:amide catabolic process GO:0003677F:DNA binding GO:0004180F:carboxypeptidase activity GO:0016811F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides GO:0046872F:metal ion binding GO:0005635C:nuclear envelope GO:0016020C:membrane |
EC:EC:3.5.1 EC:EC:3.4 |
| 4300 |
SRR924338_primary_scf7180002488742_1-854
Len: 853 bp
E-val: 1.4E-36
|
XP_018940185.1PREDICTED: LOW QUALITY PROTEIN: neogenin-like
|
GO:0001756P:somitogenesis GO:0001764P:neuron migration GO:0001841P:neural tube formation GO:0007411P:axon guidance GO:0098609P:cell-cell adhesion GO:0005515F:protein binding GO:0005886C:plasma membrane GO:0009986C:cell surface |
- |