Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 4351 |
SRR924338_primary_scf7180002491637_337-591
Len: 254 bp
E-val:
|
-
|
-
|
- |
| 4352 |
SRR924338_primary_scf7180002491742_1-1239
Len: 1,238 bp
E-val: 3.0E-67
|
XP_026096881.1E3 ubiquitin-protein ligase UBR4 isoform X5
|
GO:0110165C:cellular anatomical structure |
- |
| 4353 |
SRR924338_primary_scf7180002491784_215-1288
Len: 1,073 bp
E-val: 1.7E-180
|
KTF73975.1hypothetical protein cypCar_00047493
Hydrolases
|
GO:0003676F:nucleic acid binding GO:0004519F:endonuclease activity GO:0016787F:hydrolase activity GO:0046872F:metal ion binding |
EC:EC:3 |
| 4354 |
SRR924338_primary_scf7180002491787_1-1026
Len: 1,025 bp
E-val: 2.2E-31
|
ABA54943.1truncated thyroid receptor alpha
|
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0002154P:thyroid hormone receptor signaling pathway GO:0030154P:cell differentiation GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048384P:retinoic acid receptor signaling pathway GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0004879F:nuclear receptor activity GO:0008270F:zinc ion binding GO:0090575C:RNA polymerase II transcription regulator complex |
- |
| 4355 |
SRR924338_primary_scf7180002491898_1-357
Len: 356 bp
E-val:
|
-
|
-
|
- |
| 4356 |
SRR924338_primary_scf7180002491909_126-919
Len: 793 bp
E-val: 3.7E-18
|
XP_016103394.1PREDICTED: EF-hand calcium-binding domain-containing protein 14-like isoform X1
|
GO:0016020C:membrane |
- |
| 4357 |
SRR924338_primary_scf7180002491965_1-471
Len: 470 bp
E-val: 1.2E-37
|
KTG44974.1hypothetical protein cypCar_00015544, partial
|
GO:0007411P:axon guidance GO:0038007P:netrin-activated signaling pathway GO:0005042F:netrin receptor activity GO:0005886C:plasma membrane |
- |
| 4358 |
SRR924338_primary_scf7180002492296_1-1026
Len: 1,025 bp
E-val: 1.3E-201
|
KTG38568.1hypothetical protein cypCar_00001020
|
GO:0016020C:membrane |
- |
| 4359 |
SRR924338_primary_scf7180002492519_1-996
Len: 995 bp
E-val: 1.7E-36
|
KTG45032.1hypothetical protein cypCar_00041772
|
GO:0007268P:chemical synaptic transmission GO:0001540F:amyloid-beta binding GO:0005737C:cytoplasm GO:0005886C:plasma membrane GO:0043197C:dendritic spine |
- |
| 4360 |
SRR924338_primary_scf7180002492542_1-1160
Len: 1,159 bp
E-val: 5.5E-31
|
KTF74707.1hypothetical protein cypCar_00016602
|
GO:0000165P:MAPK cascade GO:0016192P:vesicle-mediated transport GO:0005078F:MAP-kinase scaffold activity GO:0008432F:JUN kinase binding GO:0016301F:kinase activity GO:0019894F:kinesin binding GO:0030159F:signaling receptor complex adaptor activity GO:0005737C:cytoplasm GO:0016020C:membrane |
- |
| 4361 |
SRR924338_primary_scf7180002492549_400-798
Len: 398 bp
E-val: 5.2E-37
|
KTF75093.1hypothetical protein cypCar_00017652
|
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
- |
| 4362 |
SRR924338_primary_scf7180002492736_495-977
Len: 482 bp
E-val: 2.4E-60
|
XP_018953061.1PREDICTED: rhodopsin-like
|
GO:0007186P:G protein-coupled receptor signaling pathway GO:0007601P:visual perception GO:0007602P:phototransduction GO:0004930F:G protein-coupled receptor activity GO:0009881F:photoreceptor activity GO:0046872F:metal ion binding GO:0016020C:membrane |
- |
| 4363 |
SRR924338_primary_scf7180002493065_1-1229
Len: 1,228 bp
E-val: 1.8E-229
|
XP_018965419.1PREDICTED: protocadherin-20-like
|
GO:0007156P:homophilic cell-cell adhesion GO:0009653P:anatomical structure morphogenesis GO:0005509F:calcium ion binding GO:0005886C:plasma membrane |
- |
| 4364 |
SRR924338_primary_scf7180002493202_1-1124
Len: 1,123 bp
E-val: 1.5E-17
|
XP_028843178.1C-Jun-amino-terminal kinase-interacting protein 3 isoform X1
|
GO:0000165P:MAPK cascade GO:0016192P:vesicle-mediated transport GO:0005078F:MAP-kinase scaffold activity GO:0008432F:JUN kinase binding GO:0019894F:kinesin binding GO:0030159F:signaling receptor complex adaptor activity GO:0005737C:cytoplasm |
- |
| 4365 |
SRR924338_primary_scf7180002493246_1-1327
Len: 1,326 bp
E-val: 8.1E-18
|
KTF76586.1hypothetical protein cypCar_00024813
|
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0003140P:determination of left/right asymmetry in lateral mesoderm GO:0008283P:cell population proliferation GO:0009887P:animal organ morphogenesis GO:0030154P:cell differentiation GO:0030514P:negative regulation of BMP signaling pathway GO:0035469P:determination of pancreatic left/right asymmetry GO:0035622P:intrahepatic bile duct development GO:0043067P:regulation of programmed cell death GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048384P:retinoic acid receptor signaling pathway GO:0048566P:embryonic digestive tract development GO:0061371P:determination of heart left/right asymmetry GO:0071376P:cellular response to corticotropin-releasing hormone stimulus GO:0071907P:determination of digestive tract left/right asymmetry GO:0071910P:determination of liver left/right asymmetry GO:2000026P:regulation of multicellular organismal development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0004879F:nuclear receptor activity GO:0008270F:zinc ion binding GO:0035259F:nuclear glucocorticoid receptor binding GO:0000785C:chromatin GO:0005654C:nucleoplasm GO:0005667C:transcription regulator complex |
- |
| 4366 |
SRR924338_primary_scf7180002493297_625-1074
Len: 449 bp
E-val: 1.1E-56
|
XP_026103542.1calcium-binding mitochondrial carrier protein SCaMC-2-B isoform X1
|
GO:0055085P:transmembrane transport GO:0005509F:calcium ion binding GO:0005743C:mitochondrial inner membrane |
- |
| 4367 |
SRR924338_primary_scf7180002493360_157-848
Len: 691 bp
E-val: 3.1E-82
|
XP_018952575.1PREDICTED: UBX domain-containing protein 7-like isoform X1
|
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0043130F:ubiquitin binding GO:0005634C:nucleus |
- |
| 4368 |
SRR924338_primary_scf7180002493478_1-1028
Len: 1,027 bp
E-val: 1.0E-44
|
KTG42450.1hypothetical protein cypCar_00005800
|
GO:0016477P:cell migration GO:0040037P:negative regulation of fibroblast growth factor receptor signaling pathway GO:1905475P:regulation of protein localization to membrane GO:0017134F:fibroblast growth factor binding GO:0005576C:extracellular region GO:0005886C:plasma membrane GO:0009986C:cell surface GO:0045202C:synapse GO:0098552C:side of membrane |
- |
| 4369 |
SRR924338_primary_scf7180002493673_1-654
Len: 653 bp
E-val: 7.2E-20
|
XP_016095209.1PREDICTED: centrosomal protein of 112 kDa-like
|
-
|
- |
| 4370 |
SRR924338_primary_scf7180002493785_1-1088
Len: 1,087 bp
E-val: 8.0E-48
|
XP_016085207.1PREDICTED: clathrin heavy chain 1-like isoform X1
|
GO:0009987P:cellular process GO:0005737C:cytoplasm GO:0016020C:membrane GO:0031982C:vesicle GO:0043229C:intracellular organelle |
- |
| 4371 |
SRR924338_primary_scf7180002493827_1038-1619
Len: 581 bp
E-val: 6.1E-79
|
KTF73908.1hypothetical protein cypCar_00048839
Acting on peptide bonds (peptidases)
|
EC:EC:3.4.24 | |
| 4372 |
SRR924338_primary_scf7180002493875_1-1011
Len: 1,010 bp
E-val: 8.8E-41
|
XP_018924665.1PREDICTED: chymotrypsin A-like
Acting on peptide bonds (peptidases)
|
GO:0006508P:proteolysis GO:0007586P:digestion GO:0004252F:serine-type endopeptidase activity GO:0005576C:extracellular region |
EC:EC:3.4.21 |
| 4373 |
SRR924338_primary_scf7180002493929_739-1158
Len: 419 bp
E-val: 1.6E-33
|
XP_026111355.1probable E3 ubiquitin-protein ligase makorin-1 isoform X1
|
GO:0000209P:protein polyubiquitination GO:0016567P:protein ubiquitination GO:0008270F:zinc ion binding GO:0016740F:transferase activity GO:0016874F:ligase activity GO:0046872F:metal ion binding GO:0061630F:ubiquitin protein ligase activity |
- |
| 4374 |
SRR924338_primary_scf7180002493990_1-708
Len: 707 bp
E-val: 9.1E-77
|
KTG35264.1hypothetical protein cypCar_00015825
ferric-chelate reductase (NADPH)
|
GO:0006826P:iron ion transport GO:0015677P:copper ion import GO:0008823F:cupric reductase (NADH) activity GO:0052851F:ferric-chelate reductase (NADPH) activity GO:0005886C:plasma membrane GO:0010008C:endosome membrane |
EC:EC:1.16.1.9 |
| 4375 |
SRR924338_primary_scf7180002493997_451-1023
Len: 572 bp
E-val: 2.0E-98
|
XP_018940656.1PREDICTED: homeobox protein Nkx-2.4-like
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0021854P:hypothalamus development GO:0030154P:cell differentiation GO:0030878P:thyroid gland development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0001046F:core promoter sequence-specific DNA binding GO:0005634C:nucleus |
- |