Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 4376 |
SRR924338_primary_scf7180002494050_1-606
Len: 605 bp
E-val: 3.9E-36
|
KTG44255.1hypothetical protein cypCar_00034130
|
GO:0006955P:immune response GO:0019882P:antigen processing and presentation GO:0005615C:extracellular space GO:0009897C:external side of plasma membrane GO:0042613C:MHC class II protein complex |
- |
| 4377 |
SRR924338_primary_scf7180002494207_1-973
Len: 972 bp
E-val: 7.4E-29
|
XP_018967287.1PREDICTED: LOW QUALITY PROTEIN: cullin-4B-like
|
GO:0007507P:heart development GO:0035118P:embryonic pectoral fin morphogenesis GO:0071600P:otic vesicle morphogenesis GO:0110165C:cellular anatomical structure |
- |
| 4378 |
SRR924338_primary_scf7180002494250_1-979
Len: 978 bp
E-val: 2.8E-28
|
XP_026138492.1E3 ubiquitin-protein ligase mib1 isoform X6
Ligases; Acyltransferases
|
GO:0006897P:endocytosis GO:0007219P:Notch signaling pathway GO:0016567P:protein ubiquitination GO:0004842F:ubiquitin-protein transferase activity GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0005737C:cytoplasm |
EC:EC:6 EC:EC:2.3.2 |
| 4379 |
SRR924338_primary_scf7180002494311_233-1142
Len: 909 bp
E-val: 1.1E-37
|
XP_018957434.1PREDICTED: microtubule-actin cross-linking factor 1-like
|
GO:0005856C:cytoskeleton GO:0016020C:membrane |
- |
| 4380 |
SRR924338_primary_scf7180002494318_1-899
Len: 898 bp
E-val: 9.9E-28
|
XP_026052708.1phospholipid-transporting ATPase IC-like
P-type phospholipid transporter; nucleoside-triphosphate phosphatase
|
GO:0007030P:Golgi organization GO:0045332P:phospholipid translocation GO:0000287F:magnesium ion binding GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0140326F:ATPase-coupled intramembrane lipid transporter activity GO:0005802C:trans-Golgi network GO:0005886C:plasma membrane |
EC:EC:7.6.2.1 EC:EC:3.6.1.15 |
| 4381 |
SRR924338_primary_scf7180002494441_1-842
Len: 841 bp
E-val: 1.6E-19
|
XP_017537987.1PREDICTED: myelin transcription factor 1-like protein isoform X5
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007399P:nervous system development GO:0030154P:cell differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
- |
| 4382 |
SRR924338_primary_scf7180002494728_1-773
Len: 772 bp
E-val: 1.1E-32
|
XP_026143131.1inositol 1,4,5-trisphosphate receptor type 2
|
GO:0019722P:calcium-mediated signaling GO:0051209P:release of sequestered calcium ion into cytosol GO:0005220F:inositol 1,4,5-trisphosphate-gated calcium channel activity GO:0070679F:inositol 1,4,5 trisphosphate binding GO:0005789C:endoplasmic reticulum membrane GO:0030658C:transport vesicle membrane |
- |
| 4383 |
SRR924338_primary_scf7180002494968_1-685
Len: 684 bp
E-val: 2.3E-53
|
XP_018981435.1PREDICTED: DNA damage-binding protein 1-like
|
GO:0006281P:DNA repair GO:0010564P:regulation of cell cycle process GO:0043066P:negative regulation of apoptotic process GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0005634C:nucleus GO:0035861C:site of double-strand break |
- |
| 4384 |
SRR924338_primary_scf7180002495140_1-977
Len: 976 bp
E-val: 1.6E-10
|
CAG06116.1unnamed protein product
|
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
- |
| 4385 |
SRR924338_primary_scf7180002495641_1-759
Len: 758 bp
E-val: 1.1E-16
|
CAG11289.1unnamed protein product, partial
Transferring phosphorus-containing groups
|
GO:0006338P:chromatin remodeling GO:0016567P:protein ubiquitination GO:0030331F:nuclear estrogen receptor binding GO:0031072F:heat shock protein binding GO:0051082F:unfolded protein binding GO:1990244F:histone H2AT120 kinase activity GO:0005634C:nucleus GO:0080008C:Cul4-RING E3 ubiquitin ligase complex |
EC:EC:2.7.11 |
| 4386 |
SRR924338_primary_scf7180002495654_1-696
Len: 695 bp
E-val: 1.3E-19
|
XP_018918616.1PREDICTED: neuroendocrine convertase 1-like isoform X1
Acting on peptide bonds (peptidases)
|
GO:0016486P:peptide hormone processing GO:0004252F:serine-type endopeptidase activity GO:0005615C:extracellular space GO:0016020C:membrane GO:0030133C:transport vesicle GO:0043005C:neuron projection |
EC:EC:3.4.21 |
| 4387 |
SRR924338_primary_scf7180002496129_363-839
Len: 476 bp
E-val: 2.6E-59
|
KTF95031.1hypothetical protein cypCar_00019289
|
GO:0001818P:negative regulation of cytokine production GO:0031397P:negative regulation of protein ubiquitination GO:0032435P:negative regulation of proteasomal ubiquitin-dependent protein catabolic process GO:0045071P:negative regulation of viral genome replication GO:0045088P:regulation of innate immune response GO:0003729F:mRNA binding GO:0004540F:RNA nuclease activity GO:0043130F:ubiquitin binding GO:0005730C:nucleolus GO:0005829C:cytosol GO:0016605C:PML body |
- |
| 4388 |
SRR924338_primary_scf7180002496137_157-1105
Len: 948 bp
E-val: 5.2E-168
|
KTG46418.1hypothetical protein cypCar_00044417
|
GO:0007156P:homophilic cell-cell adhesion GO:0009653P:anatomical structure morphogenesis GO:0005509F:calcium ion binding GO:0005886C:plasma membrane |
- |
| 4389 |
SRR924338_primary_scf7180002496168_292-1224
Len: 932 bp
E-val: 1.1E-21
|
XP_018968295.1PREDICTED: neurobeachin-like
|
GO:0008104P:intracellular protein localization GO:0019901F:protein kinase binding GO:0005829C:cytosol GO:0016020C:membrane |
- |
| 4390 |
SRR924338_primary_scf7180002496221_80-799
Len: 719 bp
E-val: 3.9E-136
|
KTF76488.1hypothetical protein cypCar_00048260
|
-
|
- |
| 4391 |
SRR924338_primary_scf7180002496339_1-693
Len: 692 bp
E-val: 2.3E-32
|
XP_018953231.1PREDICTED: uncharacterized protein C12orf56-like
|
-
|
- |
| 4392 |
SRR924338_primary_scf7180002496654_1-773
Len: 772 bp
E-val: 2.7E-135
|
XP_016098315.1PREDICTED: dual specificity protein phosphatase 10-like
protein-serine/threonine phosphatase; protein-tyrosine-phosphatase
|
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0006360P:transcription by RNA polymerase I GO:0046329P:negative regulation of JNK cascade GO:0008330F:protein tyrosine/threonine phosphatase activity GO:0017017F:MAP kinase tyrosine/serine/threonine phosphatase activity GO:0017018F:myosin phosphatase activity GO:0033192F:calmodulin-dependent protein phosphatase activity GO:0033550F:MAP kinase tyrosine phosphatase activity GO:0140791F:histone H2AXS139 phosphatase activity GO:0180004F:RNA polymerase II CTD heptapeptide repeat Y1 phosphatase activity GO:0180005F:RNA polymerase II CTD heptapeptide repeat T4 phosphatase activity GO:0180006F:RNA polymerase II CTD heptapeptide repeat S2 phosphatase activity GO:0180007F:RNA polymerase II CTD heptapeptide repeat S5 phosphatase activity GO:0180008F:RNA polymerase II CTD heptapeptide repeat S7 phosphatase activity GO:1990439F:MAP kinase serine/threonine phosphatase activity GO:0000120C:RNA polymerase I transcription regulator complex GO:0005829C:cytosol |
EC:EC:3.1.3.16 EC:EC:3.1.3.48 |
| 4393 |
SRR924338_primary_scf7180002496729_1-1287
Len: 1,286 bp
E-val: 2.4E-168
|
XP_018949202.1PREDICTED: E3 ubiquitin-protein ligase ZFP91-like
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0003712F:transcription coregulator activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
- |
| 4394 |
SRR924338_primary_scf7180002496764_1-554
Len: 553 bp
E-val: 3.7E-25
|
XP_026146201.1DNA (cytosine-5)-methyltransferase 3A-like isoform X1
DNA (cytosine-5-)-methyltransferase
|
GO:0032259P:methylation GO:0045892P:negative regulation of DNA-templated transcription GO:0008270F:zinc ion binding GO:0051719F:DNA (cytosine-5-)-methyltransferase activity, acting on CpN substrates GO:0051720F:DNA (cytosine-5-)-methyltransferase activity, acting on CpNpG substrates GO:0005634C:nucleus GO:0005737C:cytoplasm |
EC:EC:2.1.1.37 |
| 4395 |
SRR924338_primary_scf7180002496844_1-1330
Len: 1,329 bp
E-val: 2.3E-41
|
KTF79925.1hypothetical protein cypCar_00045535, partial
|
GO:0016973P:poly(A)+ mRNA export from nucleus GO:0005634C:nucleus |
- |
| 4396 |
SRR924338_primary_scf7180002496856_239-944
Len: 705 bp
E-val: 2.4E-53
|
KTG40051.1hypothetical protein cypCar_00030264
|
GO:0007155P:cell adhesion GO:0030246F:carbohydrate binding GO:0033691F:sialic acid binding GO:0005886C:plasma membrane |
- |
| 4397 |
SRR924338_primary_scf7180002497049_1-893
Len: 892 bp
E-val: 4.3E-31
|
KTG03268.1hypothetical protein cypCar_00000915
|
GO:0003723F:RNA binding GO:0005737C:cytoplasm |
- |
| 4398 |
SRR924338_primary_scf7180002497200_1-1078
Len: 1,077 bp
E-val: 5.0E-18
|
XP_026122941.1dual specificity testis-specific protein kinase 2-like
Transferring phosphorus-containing groups
|
GO:0051496P:positive regulation of stress fiber assembly GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
EC:EC:2.7.11 |
| 4399 |
SRR924338_primary_scf7180002497225_354-957
Len: 603 bp
E-val: 1.3E-31
|
NP_957227.1cell division cycle protein 23 homolog
|
GO:0009987P:cellular process |
- |
| 4400 |
SRR924338_primary_scf7180002497401_564-938
Len: 374 bp
E-val: 2.9E-66
|
KTF84934.1hypothetical protein cypCar_00037598, partial
|
GO:0005576C:extracellular region GO:0005581C:collagen trimer |
- |