Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 4451 |
SRR924338_primary_scf7180002517453_1-711
Len: 710 bp
E-val: 1.2E-47
|
RXN17338.1sonic hedgehog
Acting on peptide bonds (peptidases); Transferases
|
GO:0001756P:somitogenesis GO:0001839P:neural plate morphogenesis GO:0001947P:heart looping GO:0007267P:cell-cell signaling GO:0007411P:axon guidance GO:0008015P:blood circulation GO:0008285P:negative regulation of cell population proliferation GO:0009953P:dorsal/ventral pattern formation GO:0010002P:cardioblast differentiation GO:0010468P:regulation of gene expression GO:0016539P:intein-mediated protein splicing GO:0016540P:protein autoprocessing GO:0021508P:floor plate formation GO:0021520P:spinal cord motor neuron cell fate specification GO:0021984P:adenohypophysis development GO:0021986P:habenula development GO:0030510P:regulation of BMP signaling pathway GO:0030902P:hindbrain development GO:0030917P:midbrain-hindbrain boundary development GO:0030947P:regulation of vascular endothelial growth factor receptor signaling pathway GO:0031018P:endocrine pancreas development GO:0031076P:embryonic camera-type eye development GO:0032835P:glomerulus development GO:0033339P:pectoral fin development GO:0035143P:caudal fin morphogenesis GO:0042462P:eye photoreceptor cell development GO:0042476P:odontogenesis GO:0042694P:muscle cell fate specification GO:0045494P:photoreceptor cell maintenance GO:0045880P:positive regulation of smoothened signaling pathway GO:0048557P:embryonic digestive tract morphogenesis GO:0048618P:post-embryonic foregut morphogenesis GO:0048702P:embryonic neurocranium morphogenesis GO:0048703P:embryonic viscerocranium morphogenesis GO:0048709P:oligodendrocyte differentiation GO:0048741P:skeletal muscle fiber development GO:0048793P:pronephros development GO:0048795P:swim bladder morphogenesis GO:0048839P:inner ear development GO:0060956P:endocardial cell differentiation GO:0061035P:regulation of cartilage development GO:0070444P:oligodendrocyte progenitor proliferation GO:0097264P:self proteolysis GO:1905178P:regulation of cardiac muscle tissue regeneration GO:0005113F:patched binding GO:0005509F:calcium ion binding GO:0008233F:peptidase activity GO:0140853F:cholesterol-protein transferase activity GO:0000139C:Golgi membrane GO:0005615C:extracellular space GO:0005789C:endoplasmic reticulum membrane GO:0005886C:plasma membrane |
EC:EC:3.4 EC:EC:2 |
| 4452 |
SRR924338_primary_scf7180002517461_750-1423
Len: 673 bp
E-val: 2.7E-78
|
KTG05071.1hypothetical protein cypCar_00039465
|
GO:0007399P:nervous system development GO:0016020C:membrane |
- |
| 4453 |
SRR924338_primary_scf7180002517475_1-1802
Len: 1,801 bp
E-val: 3.5E-32
|
XP_016335933.1PREDICTED: limbic system-associated membrane protein-like, partial
|
GO:0007156P:homophilic cell-cell adhesion GO:0007411P:axon guidance GO:0050808P:synapse organization GO:0008046F:axon guidance receptor activity GO:0005886C:plasma membrane GO:0030424C:axon GO:0043025C:neuronal cell body |
- |
| 4454 |
SRR924338_primary_scf7180002517478_1-1728
Len: 1,727 bp
E-val: 8.1E-79
|
KTG38908.1hypothetical protein cypCar_00007653
|
- | |
| 4455 |
SRR924338_primary_scf7180002517540_1041-1466
Len: 425 bp
E-val: 3.0E-75
|
KTF99637.1hypothetical protein cypCar_00012492
|
GO:0001947P:heart looping GO:0003142P:cardiogenic plate morphogenesis GO:0003144P:embryonic heart tube formation GO:0003342P:proepicardium development GO:0003357P:noradrenergic neuron differentiation GO:0006357P:regulation of transcription by RNA polymerase II GO:0010002P:cardioblast differentiation GO:0030859P:polarized epithelial cell differentiation GO:0030878P:thyroid gland development GO:0035118P:embryonic pectoral fin morphogenesis GO:0048485P:sympathetic nervous system development GO:0048703P:embryonic viscerocranium morphogenesis GO:0055007P:cardiac muscle cell differentiation GO:0060047P:heart contraction GO:0071908P:determination of intestine left/right asymmetry GO:0072015P:podocyte development GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
- |
| 4456 |
SRR924338_primary_scf7180002517554_1-1522
Len: 1,521 bp
E-val: 5.4E-244
|
KTG41079.1hypothetical protein cypCar_00044266, partial
glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-
|
GO:0047238F:glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity GO:0032580C:Golgi cisterna membrane |
EC:EC:2.4.1.175 |
| 4457 |
SRR924338_primary_scf7180002517601_197-1120
Len: 923 bp
E-val: 8.0E-166
|
XP_018963369.1PREDICTED: cyclin-dependent kinase 5 activator 1-like
Transferring phosphorus-containing groups
|
GO:0007411P:axon guidance GO:0007420P:brain development GO:0035622P:intrahepatic bile duct development GO:0048511P:rhythmic process GO:0016301F:kinase activity GO:0019901F:protein kinase binding GO:0061575F:cyclin-dependent protein serine/threonine kinase activator activity GO:0005634C:nucleus GO:0005886C:plasma membrane GO:0016533C:protein kinase 5 complex GO:0030426C:growth cone GO:0043204C:perikaryon GO:0048471C:perinuclear region of cytoplasm |
EC:EC:2.7 |
| 4458 |
SRR924338_primary_scf7180002517620_337-1554
Len: 1,217 bp
E-val: 1.3E-219
|
KTF86734.1hypothetical protein cypCar_00024248
|
GO:0006940P:regulation of smooth muscle contraction GO:0019229P:regulation of vasoconstriction GO:0030168P:platelet activation GO:0071881P:adenylate cyclase-inhibiting adrenergic receptor signaling pathway GO:0004938F:alpha2-adrenergic receptor activity GO:0051379F:epinephrine binding GO:0005886C:plasma membrane |
- |
| 4459 |
SRR924338_primary_scf7180002517648_1-1817
Len: 1,816 bp
E-val: 4.6E-24
|
XP_018928694.1PREDICTED: putative deoxyribonuclease TATDN1
Acting on ester bonds
|
GO:0001654P:eye development GO:0006259P:DNA metabolic process GO:0004536F:DNA nuclease activity GO:0016788F:hydrolase activity, acting on ester bonds |
EC:EC:3.1 |
| 4460 |
SRR924338_primary_scf7180002517671_1-1450
Len: 1,449 bp
E-val: 1.7E-24
|
RXN05511.1GTP-binding 1-like isoform X1
nucleoside-triphosphate phosphatase
|
GO:0006414P:translational elongation GO:0003746F:translation elongation factor activity GO:0003924F:GTPase activity GO:0005525F:GTP binding |
EC:EC:3.6.1.15 |
| 4461 |
SRR924338_primary_scf7180002517672_1-1456
Len: 1,455 bp
E-val: 2.3E-26
|
XP_018953162.1PREDICTED: nuclear pore complex protein Nup88-like
|
GO:0000055P:ribosomal large subunit export from nucleus GO:0000056P:ribosomal small subunit export from nucleus GO:0006406P:mRNA export from nucleus GO:0006606P:protein import into nucleus GO:0017056F:structural constituent of nuclear pore GO:0005643C:nuclear pore |
- |
| 4462 |
SRR924338_primary_scf7180002517693_1-1873
Len: 1,872 bp
E-val: 4.8E-16
|
XP_018918906.1PREDICTED: LOW QUALITY PROTEIN: ephrin-A5b-like
|
-
|
- |
| 4463 |
SRR924338_primary_scf7180002517700_1-1171
Len: 1,170 bp
E-val: 1.3E-67
|
KTF83638.1hypothetical protein cypCar_00027789
|
GO:0050789P:regulation of biological process |
- |
| 4464 |
SRR924338_primary_scf7180002517723_1-728
Len: 727 bp
E-val: 8.2E-49
|
KTG46744.1hypothetical protein cypCar_00041584
|
- | |
| 4465 |
SRR924338_primary_scf7180002517728_1-1749
Len: 1,748 bp
E-val: 9.1E-296
|
KTG43935.1hypothetical protein cypCar_00038772
|
GO:0007156P:homophilic cell-cell adhesion GO:0009653P:anatomical structure morphogenesis GO:0005509F:calcium ion binding GO:0005886C:plasma membrane |
- |
| 4466 |
SRR924338_primary_scf7180002517733_278-1357
Len: 1,079 bp
E-val: 2.5E-174
|
XP_018964656.1PREDICTED: alpha-internexin-like
|
GO:0045109P:intermediate filament organization GO:0048812P:neuron projection morphogenesis GO:0099185P:postsynaptic intermediate filament cytoskeleton organization GO:0099184F:structural constituent of postsynaptic intermediate filament cytoskeleton GO:0005737C:cytoplasm GO:0005882C:intermediate filament GO:0099160C:postsynaptic intermediate filament cytoskeleton |
- |
| 4467 |
SRR924338_primary_scf7180002517763_1-145
Len: 144 bp
E-val: 1.3E-17
|
XP_026099336.1guanylate-binding protein 1-like
nucleoside-triphosphate phosphatase
|
EC:EC:3.6.1.15 | |
| 4468 |
SRR924338_primary_scf7180002517776_1-1841
Len: 1,840 bp
E-val: 8.6E-10
|
XP_026089897.1protein transport protein Sec24A-like isoform X2
|
GO:0006886P:intracellular protein transport GO:0090110P:COPII-coated vesicle cargo loading GO:0000149F:SNARE binding GO:0008270F:zinc ion binding GO:0005789C:endoplasmic reticulum membrane GO:0005829C:cytosol GO:0030127C:COPII vesicle coat GO:0070971C:endoplasmic reticulum exit site |
- |
| 4469 |
SRR924338_primary_scf7180002517821_1-1486
Len: 1,485 bp
E-val: 5.4E-164
|
XP_016136240.1PREDICTED: melatonin receptor type 1A-A
|
GO:0007186P:G protein-coupled receptor signaling pathway GO:0048511P:rhythmic process GO:0008502F:melatonin receptor activity GO:0005886C:plasma membrane |
- |
| 4470 |
SRR924338_primary_scf7180002517845_1-1572
Len: 1,571 bp
E-val: 8.3E-30
|
RXN24263.1glutamate receptor 4 isoform X3
|
GO:0008347P:glial cell migration GO:0034220P:monoatomic ion transmembrane transport GO:0035235P:ionotropic glutamate receptor signaling pathway GO:0035249P:synaptic transmission, glutamatergic GO:0050804P:modulation of chemical synaptic transmission GO:0060078P:regulation of postsynaptic membrane potential GO:0004971F:AMPA glutamate receptor activity GO:1904315F:transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential GO:0032281C:AMPA glutamate receptor complex GO:0043025C:neuronal cell body GO:0043197C:dendritic spine GO:0098839C:postsynaptic density membrane |
- |
| 4471 |
SRR924338_primary_scf7180002517942_1-1797
Len: 1,796 bp
E-val: 1.5E-128
|
XP_016373401.1PREDICTED: AT-rich interactive domain-containing protein 1A-like isoform X1
|
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0031491F:nucleosome binding GO:0005654C:nucleoplasm GO:0016514C:SWI/SNF complex GO:0035060C:brahma complex GO:0071565C:nBAF complex |
- |
| 4472 |
SRR924338_primary_scf7180002517972_1-1765
Len: 1,764 bp
E-val: 1.4E-25
|
RXN05261.1dynein heavy chain axonemal
Isomerases altering macromolecular conformation; nucleoside-triphosphate phosphatase
|
GO:0007018P:microtubule-based movement GO:0005524F:ATP binding GO:0008569F:minus-end-directed microtubule motor activity GO:0016887F:ATP hydrolysis activity GO:0045505F:dynein intermediate chain binding GO:0051959F:dynein light intermediate chain binding GO:0005737C:cytoplasm GO:0005874C:microtubule GO:0030286C:dynein complex GO:0031514C:motile cilium |
EC:EC:5.6.1 EC:EC:3.6.1.15 |
| 4473 |
SRR924338_primary_scf7180002517980_1-1178
Len: 1,177 bp
E-val: 2.0E-20
|
XP_026128515.1poly(rC)-binding protein 2 isoform X1
|
GO:0003723F:RNA binding |
- |
| 4474 |
SRR924338_primary_scf7180002517982_344-1654
Len: 1,310 bp
E-val: 3.0E-243
|
KTG33705.1hypothetical protein cypCar_00037676
|
GO:0007264P:small GTPase-mediated signal transduction GO:0005096F:GTPase activator activity GO:0030027C:lamellipodium |
- |
| 4475 |
SRR924338_primary_scf7180002518015_1-1814
Len: 1,813 bp
E-val: 2.1E-48
|
KTG35922.1hypothetical protein cypCar_00018185, partial
|
GO:0110165C:cellular anatomical structure |
- |