Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 4701 |
SRR924338_primary_scf7180002525797_1-733
Len: 732 bp
E-val: 1.2E-36
|
ABV59209.1hypoxia-inducible factor 1 alpha
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0071456P:cellular response to hypoxia GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0046983F:protein dimerization activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
- |
| 4702 |
SRR924338_primary_scf7180002525801_493-919
Len: 426 bp
E-val: 2.8E-20
|
XP_026082079.1alpha-2-macroglobulin-like isoform X1
|
GO:0007399P:nervous system development GO:0004867F:serine-type endopeptidase inhibitor activity GO:0005615C:extracellular space GO:0016020C:membrane |
- |
| 4703 |
SRR924338_primary_scf7180002525892_1-774
Len: 773 bp
E-val: 1.4E-14
|
KTG19669.1hypothetical protein cypCar_00035085, partial
histone deacetylase
|
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0006325P:chromatin organization GO:0031078F:histone H3K14 deacetylase activity, hydrolytic mechanism GO:0032129F:histone H3K9 deacetylase activity, hydrolytic mechanism GO:0034739F:histone H4K16 deacetylase activity, hydrolytic mechanism GO:0046872F:metal ion binding GO:0140937F:histone H4K12 deacetylase activity, hydrolytic mechanism GO:0180032F:histone H4K5 deacetylase activity, hydrolytic mechanism GO:0180033F:histone H4K8 deacetylase activity, hydrolytic mechanism GO:1990162F:histone H3K4 deacetylase activity, hydrolytic mechanism GO:0005634C:nucleus |
EC:EC:3.5.1.98 |
| 4704 |
SRR924338_primary_scf7180002525895_278-1193
Len: 915 bp
E-val: 1.6E-36
|
KTF79853.1hypothetical protein cypCar_00026675, partial
|
GO:0007399P:nervous system development GO:0034765P:regulation of monoatomic ion transmembrane transport GO:1990573P:potassium ion import across plasma membrane GO:0015467F:G-protein activated inward rectifier potassium channel activity GO:0005886C:plasma membrane GO:0034702C:monoatomic ion channel complex |
- |
| 4705 |
SRR924338_primary_scf7180002526105_319-933
Len: 614 bp
E-val: 2.0E-40
|
KTG34758.1hypothetical protein cypCar_00021467
|
GO:0045454P:cell redox homeostasis GO:0055085P:transmembrane transport GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0042626F:ATPase-coupled transmembrane transporter activity GO:0140359F:ABC-type transporter activity GO:0005886C:plasma membrane GO:0016020C:membrane GO:0016324C:apical plasma membrane |
- |
| 4706 |
SRR924338_primary_scf7180002526197_1-1749
Len: 1,748 bp
E-val: 5.1E-20
|
KPP60064.1ceramide synthase 2-like
sphingosine N-acyltransferase
|
GO:0046513P:ceramide biosynthetic process GO:0003677F:DNA binding GO:0050291F:sphingosine N-acyltransferase activity GO:0005634C:nucleus GO:0005789C:endoplasmic reticulum membrane |
EC:EC:2.3.1.24 |
| 4707 |
SRR924338_primary_scf7180002526371_1-1186
Len: 1,185 bp
E-val: 2.0E-36
|
XP_018942899.1PREDICTED: cadherin-17-like
nucleoside-triphosphate phosphatase
|
GO:0000902P:cell morphogenesis GO:0007043P:cell-cell junction assembly GO:0007156P:homophilic cell-cell adhesion GO:0016339P:calcium-dependent cell-cell adhesion GO:0016477P:cell migration GO:0034332P:adherens junction organization GO:0044331P:cell-cell adhesion mediated by cadherin GO:0003925F:G protein activity GO:0005509F:calcium ion binding GO:0005525F:GTP binding GO:0008013F:beta-catenin binding GO:0045296F:cadherin binding GO:0005912C:adherens junction GO:0016342C:catenin complex |
EC:EC:3.6.1.15 |
| 4708 |
SRR924338_primary_scf7180002526393_1-831
Len: 830 bp
E-val: 6.3E-29
|
XP_026070928.1chromodomain-helicase-DNA-binding protein 9-like isoform X8
DNA helicase; DNA 3'-5' helicase
|
GO:0006325P:chromatin organization GO:0003677F:DNA binding GO:0005524F:ATP binding GO:0009378F:four-way junction helicase activity GO:0016787F:hydrolase activity GO:0036121F:double-stranded DNA helicase activity GO:0061749F:forked DNA-dependent helicase activity GO:1990518F:single-stranded 3'-5' DNA helicase activity GO:0005634C:nucleus |
EC:EC:3.6.4.12 EC:EC:5.6.2.4 |
| 4709 |
SRR924338_primary_scf7180002526410_1-1102
Len: 1,101 bp
E-val: 4.0E-71
|
KTG39056.1hypothetical protein cypCar_00047564, partial
|
GO:0006897P:endocytosis GO:0007399P:nervous system development GO:0060070P:canonical Wnt signaling pathway GO:0017147F:Wnt-protein binding GO:0042813F:Wnt receptor activity GO:0005886C:plasma membrane |
- |
| 4710 |
SRR924338_primary_scf7180002526473_1-1010
Len: 1,009 bp
E-val: 4.9E-60
|
KTF81611.1hypothetical protein cypCar_00017631
|
GO:0006338P:chromatin remodeling GO:0006355P:regulation of DNA-templated transcription GO:0000785C:chromatin GO:0005634C:nucleus |
- |
| 4711 |
SRR924338_primary_scf7180002526524_283-1340
Len: 1,057 bp
E-val: 6.3E-167
|
KTG27716.1hypothetical protein cypCar_00034181
DNA topoisomerase
|
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0001817P:regulation of cytokine production GO:0002682P:regulation of immune system process GO:0006260P:DNA replication GO:0006265P:DNA topological change GO:0007059P:chromosome segregation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0003917F:DNA topoisomerase type I (single strand cut, ATP-independent) activity GO:0008270F:zinc ion binding GO:0005654C:nucleoplasm GO:0005694C:chromosome GO:0005730C:nucleolus |
EC:EC:5.6.2.1 |
| 4712 |
SRR924338_primary_scf7180002526531_1-1203
Len: 1,202 bp
E-val: 6.1E-33
|
KTG06272.1hypothetical protein cypCar_00024010
|
GO:0003674F:molecular_function |
- |
| 4713 |
SRR924338_primary_scf7180002526532_1-1602
Len: 1,601 bp
E-val: 4.8E-25
|
XP_016120016.1PREDICTED: unconventional myosin-XVIIIa-like, partial
|
GO:0031032P:actomyosin structure organization GO:0048731P:system development GO:0003774F:cytoskeletal motor activity GO:0003779F:actin binding GO:0005524F:ATP binding GO:0051015F:actin filament binding GO:0005737C:cytoplasm GO:0016459C:myosin complex GO:0016460C:myosin II complex GO:0032982C:myosin filament |
- |
| 4714 |
SRR924338_primary_scf7180002526561_198-782
Len: 584 bp
E-val: 4.3E-24
|
KTG33512.1hypothetical protein cypCar_00010654
|
-
|
- |
| 4715 |
SRR924338_primary_scf7180002526620_1-1452
Len: 1,451 bp
E-val: 2.1E-43
|
XP_016125728.1PREDICTED: sodium-dependent neutral amino acid transporter B(0)AT2-like
|
GO:0046942P:carboxylic acid transport GO:0055085P:transmembrane transport GO:0015293F:symporter activity GO:0016020C:membrane |
- |
| 4716 |
SRR924338_primary_scf7180002526686_1-843
Len: 842 bp
E-val: 7.6E-30
|
XP_026059144.1vesicular glutamate transporter 2.2-like
|
GO:0034220P:monoatomic ion transmembrane transport GO:0015291F:secondary active transmembrane transporter activity GO:0110165C:cellular anatomical structure |
- |
| 4717 |
SRR924338_primary_scf7180002526734_190-1005
Len: 815 bp
E-val: 1.3E-140
|
XP_018956568.1PREDICTED: claudin-14-like
|
GO:0007155P:cell adhesion GO:0070830P:bicellular tight junction assembly GO:0005198F:structural molecule activity GO:0005886C:plasma membrane GO:0005923C:bicellular tight junction |
- |
| 4718 |
SRR924338_primary_scf7180002526739_1-592
Len: 591 bp
E-val: 1.6E-29
|
XP_018969071.1PREDICTED: dual specificity mitogen-activated protein kinase kinase 2-like
Transferring phosphorus-containing groups; Transferring phosphorus-containing groups; dual-specificity kinase; mitogen-activated protein kinase kinase
|
GO:0032872P:regulation of stress-activated MAPK cascade GO:0090170P:regulation of Golgi inheritance GO:2000641P:regulation of early endosome to late endosome transport GO:0004674F:protein serine/threonine kinase activity GO:0004708F:MAP kinase kinase activity GO:0004713F:protein tyrosine kinase activity GO:0005524F:ATP binding GO:0046983F:protein dimerization activity GO:0005739C:mitochondrion GO:0005769C:early endosome GO:0005770C:late endosome GO:0005925C:focal adhesion |
EC:EC:2.7.10 EC:EC:2.7.11 EC:EC:2.7.12.1 EC:EC:2.7.12.2 |
| 4719 |
SRR924338_primary_scf7180002526757_1-1003
Len: 1,002 bp
E-val: 1.5E-56
|
KTF77710.1hypothetical protein cypCar_00043642, partial
|
GO:0030154P:cell differentiation |
- |
| 4720 |
SRR924338_primary_scf7180002526761_1-1050
Len: 1,049 bp
E-val: 6.1E-37
|
KTG12928.1hypothetical protein cypCar_00005668
|
GO:0110165C:cellular anatomical structure |
- |
| 4721 |
SRR924338_primary_scf7180002526911_1-1080
Len: 1,079 bp
E-val: 2.0E-38
|
KTG36767.1hypothetical protein cypCar_00009489, partial
|
GO:0055085P:transmembrane transport GO:0022857F:transmembrane transporter activity GO:0005886C:plasma membrane |
- |
| 4722 |
SRR924338_primary_scf7180002526949_1-768
Len: 767 bp
E-val: 4.8E-15
|
ROL44804.1Protein TSSC1
|
- | |
| 4723 |
SRR924338_primary_scf7180002527027_1283-1592
Len: 309 bp
E-val: 5.1E-48
|
KTF89250.1hypothetical protein cypCar_00004671
|
GO:0007156P:homophilic cell-cell adhesion GO:0009653P:anatomical structure morphogenesis GO:0005509F:calcium ion binding GO:0005886C:plasma membrane |
- |
| 4724 |
SRR924338_primary_scf7180002527095_1-1033
Len: 1,032 bp
E-val: 1.6E-42
|
KTG32092.1hypothetical protein cypCar_00010880
|
GO:0007155P:cell adhesion GO:0007411P:axon guidance GO:0007420P:brain development GO:0098609P:cell-cell adhesion GO:0098632F:cell-cell adhesion mediator activity GO:0005886C:plasma membrane GO:0016020C:membrane GO:0030424C:axon |
- |
| 4725 |
SRR924338_primary_scf7180002527121_913-1405
Len: 492 bp
E-val: 2.3E-63
|
KTG38373.1hypothetical protein cypCar_00037179, partial
|
GO:0007399P:nervous system development GO:0007626P:locomotory behavior GO:0030036P:actin cytoskeleton organization GO:0046716P:muscle cell cellular homeostasis GO:0051015F:actin filament binding GO:0043232C:intracellular membraneless organelle |
- |