Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 4726 |
SRR924338_primary_scf7180002527221_1-560
Len: 559 bp
E-val: 2.3E-67
|
RXN19713.1transmembrane protein 178B
|
GO:0016020C:membrane |
- |
| 4727 |
SRR924338_primary_scf7180002527307_256-969
Len: 713 bp
E-val: 3.5E-100
|
XP_018965017.1PREDICTED: collagen alpha-1(XXVIII) chain-like
|
GO:0007155P:cell adhesion GO:0004867F:serine-type endopeptidase inhibitor activity GO:0030020F:extracellular matrix structural constituent conferring tensile strength GO:0005594C:collagen type IX trimer GO:0005615C:extracellular space |
- |
| 4728 |
SRR924338_primary_scf7180002527375_1-1252
Len: 1,251 bp
E-val: 2.9E-25
|
XP_026074196.1transcription termination factor 2 isoform X1
Hydrolases
|
GO:0006281P:DNA repair GO:0005524F:ATP binding GO:0008094F:ATP-dependent activity, acting on DNA GO:0008270F:zinc ion binding GO:0016787F:hydrolase activity GO:0005634C:nucleus |
EC:EC:3 |
| 4729 |
SRR924338_primary_scf7180002527447_462-771
Len: 309 bp
E-val: 2.4E-13
|
XP_018978198.1PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal export protein NMD3
|
GO:0000055P:ribosomal large subunit export from nucleus GO:0015031P:protein transport GO:0043023F:ribosomal large subunit binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
- |
| 4730 |
SRR924338_primary_scf7180002527453_210-1217
Len: 1,007 bp
E-val: 1.9E-112
|
KTF86378.1hypothetical protein cypCar_00045017
|
GO:0009953P:dorsal/ventral pattern formation GO:0042661P:regulation of mesodermal cell fate specification GO:0042663P:regulation of endodermal cell fate specification GO:0042803F:protein homodimerization activity GO:0046982F:protein heterodimerization activity |
- |
| 4731 |
SRR924338_primary_scf7180002527469_228-824
Len: 596 bp
E-val: 8.1E-103
|
XP_016303848.1PREDICTED: GTP-binding protein Di-Ras1-like
nucleoside-triphosphate phosphatase
|
GO:0007165P:signal transduction GO:0048666P:neuron development GO:0061551P:trigeminal ganglion development GO:0003925F:G protein activity GO:0005525F:GTP binding GO:0019003F:GDP binding GO:0005886C:plasma membrane |
EC:EC:3.6.1.15 |
| 4732 |
SRR924338_primary_scf7180002527546_1-1364
Len: 1,363 bp
E-val: 2.0E-24
|
KTG40425.1hypothetical protein cypCar_00011575
|
GO:0005737C:cytoplasm |
- |
| 4733 |
SRR924338_primary_scf7180002527587_1-991
Len: 990 bp
E-val:
|
-
|
-
|
- |
| 4734 |
SRR924338_primary_scf7180002527605_1-558
Len: 557 bp
E-val: 1.2E-87
|
XP_018970926.1PREDICTED: pro-neuregulin-2, membrane-bound isoform-like
|
GO:0007399P:nervous system development GO:0035556P:intracellular signal transduction GO:0038130P:ERBB4 signaling pathway GO:0048513P:animal organ development GO:0008083F:growth factor activity GO:0005615C:extracellular space GO:0005886C:plasma membrane |
- |
| 4735 |
SRR924338_primary_scf7180002527651_426-854
Len: 428 bp
E-val: 4.2E-53
|
XP_018918947.1PREDICTED: disks large-associated protein 4-like
|
GO:0023052P:signaling GO:0060090F:molecular adaptor activity GO:0098978C:glutamatergic synapse GO:0099572C:postsynaptic specialization |
- |
| 4736 |
SRR924338_primary_scf7180002527738_1-1232
Len: 1,231 bp
E-val: 4.3E-183
|
XP_026100778.1potassium voltage-gated channel subfamily C member 1-like
|
GO:0001508P:action potential GO:0051260P:protein homooligomerization GO:0071805P:potassium ion transmembrane transport GO:0005251F:delayed rectifier potassium channel activity GO:0008076C:voltage-gated potassium channel complex GO:0032590C:dendrite membrane GO:0032809C:neuronal cell body membrane GO:0042734C:presynaptic membrane GO:0043679C:axon terminus GO:0045211C:postsynaptic membrane |
- |
| 4737 |
SRR924338_primary_scf7180002527804_157-1493
Len: 1,336 bp
E-val: 7.3E-27
|
XP_016393775.1PREDICTED: liprin-alpha-1
|
- | |
| 4738 |
SRR924338_primary_scf7180002527808_211-1302
Len: 1,091 bp
E-val: 1.0E-10
|
NP_001157126.1solute carrier family 12 member 2 isoform 2
|
GO:0006884P:cell volume homeostasis GO:0035725P:sodium ion transmembrane transport GO:0042472P:inner ear morphogenesis GO:0048798P:swim bladder inflation GO:0055064P:chloride ion homeostasis GO:0055075P:potassium ion homeostasis GO:0055078P:sodium ion homeostasis GO:0072488P:ammonium transmembrane transport GO:1902476P:chloride transmembrane transport GO:1990573P:potassium ion import across plasma membrane GO:0008511F:sodium:potassium:chloride symporter activity GO:0008519F:ammonium channel activity GO:0042802F:identical protein binding GO:0046872F:metal ion binding GO:0016323C:basolateral plasma membrane GO:0016324C:apical plasma membrane |
- |
| 4739 |
SRR924338_primary_scf7180002527814_1-425
Len: 424 bp
E-val: 9.1E-32
|
XP_018930978.1PREDICTED: short stature homeobox protein 2 isoform X1
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007507P:heart development GO:0008016P:regulation of heart contraction GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:1990837F:sequence-specific double-stranded DNA binding GO:0005634C:nucleus |
- |
| 4740 |
SRR924338_primary_scf7180002527925_1-901
Len: 900 bp
E-val: 1.1E-61
|
XP_020465147.1leucine-rich repeat-containing protein 58 isoform X1
|
GO:0030154P:cell differentiation GO:0030510P:regulation of BMP signaling pathway GO:0035556P:intracellular signal transduction GO:0003674F:molecular_function GO:0005509F:calcium ion binding GO:0008201F:heparin binding GO:0005575C:cellular_component GO:0005576C:extracellular region GO:0005615C:extracellular space GO:0005737C:cytoplasm |
- |
| 4741 |
SRR924338_primary_scf7180002527941_1-580
Len: 579 bp
E-val: 2.1E-39
|
XP_018966835.1PREDICTED: multiple epidermal growth factor-like domains protein 10
|
GO:0009987P:cellular process GO:0005886C:plasma membrane |
- |
| 4742 |
SRR924338_primary_scf7180002528022_1-785
Len: 784 bp
E-val: 9.8E-48
|
KTG38936.1hypothetical protein cypCar_00022538, partial
phosphoinositide phospholipase C
|
GO:0007186P:G protein-coupled receptor signaling pathway GO:0043116P:negative regulation of vascular permeability GO:0046488P:phosphatidylinositol metabolic process GO:0048015P:phosphatidylinositol-mediated signaling GO:0048703P:embryonic viscerocranium morphogenesis GO:0051209P:release of sequestered calcium ion into cytosol GO:0060536P:cartilage morphogenesis GO:0090281P:negative regulation of calcium ion import GO:0004435F:phosphatidylinositol-4,5-bisphosphate phospholipase C activity GO:0005516F:calmodulin binding GO:0005737C:cytoplasm |
EC:EC:3.1.4.11 |
| 4743 |
SRR924338_primary_scf7180002528082_1-458
Len: 457 bp
E-val: 2.0E-32
|
XP_018966715.1PREDICTED: protein phosphatase PTC7 homolog
protein-serine/threonine phosphatase
|
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0017018F:myosin phosphatase activity GO:0033192F:calmodulin-dependent protein phosphatase activity GO:0046872F:metal ion binding GO:0140791F:histone H2AXS139 phosphatase activity GO:0180004F:RNA polymerase II CTD heptapeptide repeat Y1 phosphatase activity GO:0180005F:RNA polymerase II CTD heptapeptide repeat T4 phosphatase activity GO:0180006F:RNA polymerase II CTD heptapeptide repeat S2 phosphatase activity GO:0180007F:RNA polymerase II CTD heptapeptide repeat S5 phosphatase activity GO:0180008F:RNA polymerase II CTD heptapeptide repeat S7 phosphatase activity GO:1990439F:MAP kinase serine/threonine phosphatase activity GO:0005739C:mitochondrion |
EC:EC:3.1.3.16 |
| 4744 |
SRR924338_primary_scf7180002528205_1-403
Len: 402 bp
E-val: 6.4E-19
|
RXN08807.1reelin isoform X5
Acting on peptide bonds (peptidases)
|
GO:0001764P:neuron migration GO:0006508P:proteolysis GO:0007155P:cell adhesion GO:0007417P:central nervous system development GO:0008236F:serine-type peptidase activity GO:0046872F:metal ion binding GO:0070325F:lipoprotein particle receptor binding GO:0005615C:extracellular space GO:0043005C:neuron projection |
EC:EC:3.4 |
| 4745 |
SRR924338_primary_scf7180002528258_1-1160
Len: 1,159 bp
E-val: 5.1E-77
|
KTF88163.1hypothetical protein cypCar_00024479
Isomerases altering macromolecular conformation
|
GO:0004386F:helicase activity |
EC:EC:5.6.2 |
| 4746 |
SRR924338_primary_scf7180002528350_1-941
Len: 940 bp
E-val: 1.9E-50
|
XP_018974686.1PREDICTED: B-cell receptor CD22-like
|
GO:0016020C:membrane |
- |
| 4747 |
SRR924338_primary_scf7180002528366_1-1712
Len: 1,711 bp
E-val: 2.6E-37
|
KTF81713.1hypothetical protein cypCar_00009908
|
GO:0015630C:microtubule cytoskeleton |
- |
| 4748 |
SRR924338_primary_scf7180002528371_1-1249
Len: 1,248 bp
E-val: 5.0E-38
|
XP_016308101.1PREDICTED: FGGY carbohydrate kinase domain-containing protein
|
GO:0005975P:carbohydrate metabolic process GO:0019321P:pentose metabolic process GO:0046835P:carbohydrate phosphorylation GO:0016301F:kinase activity GO:0016773F:phosphotransferase activity, alcohol group as acceptor GO:0019150F:D-ribulokinase activity GO:0005737C:cytoplasm GO:0070461C:SAGA-type complex |
- |
| 4749 |
SRR924338_primary_scf7180002528411_253-1032
Len: 779 bp
E-val: 7.2E-59
|
KTG05582.1hypothetical protein cypCar_00004494
|
GO:0110165C:cellular anatomical structure |
- |
| 4750 |
SRR924338_primary_scf7180002528482_1-502
Len: 501 bp
E-val: 3.1E-31
|
XP_026115860.1neuroligin-3-like isoform X2
|
GO:0007158P:neuron cell-cell adhesion GO:0048488P:synaptic vesicle endocytosis GO:0050804P:modulation of chemical synaptic transmission GO:0097104P:postsynaptic membrane assembly GO:0097105P:presynaptic membrane assembly GO:0038023F:signaling receptor activity GO:0042043F:neurexin family protein binding GO:0005886C:plasma membrane GO:0009986C:cell surface GO:0098793C:presynapse |
- |