Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 5201 |
SRR924338_primary_scf7180002608165_1-713
Len: 712 bp
E-val: 1.6E-121
|
XP_018973647.1PREDICTED: uncharacterized protein LOC109104813
|
GO:0006355P:regulation of DNA-templated transcription GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
- |
| 5202 |
SRR924338_primary_scf7180002608178_1-1249
Len: 1,248 bp
E-val: 6.1E-52
|
XP_018951400.1PREDICTED: PH-interacting protein-like
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007010P:cytoskeleton organization GO:0008360P:regulation of cell shape GO:0031492F:nucleosomal DNA binding GO:0000785C:chromatin GO:0005634C:nucleus |
- |
| 5203 |
SRR924338_primary_scf7180002608389_522-1220
Len: 698 bp
E-val: 1.6E-126
|
ACF35050.1brain-derived neurotrophic factor, partial
|
GO:0007169P:cell surface receptor protein tyrosine kinase signaling pathway GO:0007420P:brain development GO:0021675P:nerve development GO:0033555P:multicellular organismal response to stress GO:0038180P:nerve growth factor signaling pathway GO:0043524P:negative regulation of neuron apoptotic process GO:0048512P:circadian behavior GO:0048812P:neuron projection morphogenesis GO:0050804P:modulation of chemical synaptic transmission GO:0071542P:dopaminergic neuron differentiation GO:0099054P:presynapse assembly GO:0005163F:nerve growth factor receptor binding GO:0008083F:growth factor activity GO:0005615C:extracellular space GO:0008021C:synaptic vesicle GO:0030424C:axon GO:0030425C:dendrite |
- |
| 5204 |
SRR924338_primary_scf7180002608414_165-974
Len: 809 bp
E-val: 3.2E-142
|
XP_018926343.1PREDICTED: homeobox protein TGIF2-like
|
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0003677F:DNA binding GO:0005634C:nucleus |
- |
| 5205 |
SRR924338_primary_scf7180002608500_1-500
Len: 499 bp
E-val: 6.1E-27
|
RXN19581.1myosin-9 isoform X1
myosin ATPase
|
GO:0003231P:cardiac ventricle development GO:0008360P:regulation of cell shape GO:0021555P:midbrain-hindbrain boundary morphogenesis GO:0070650P:actin filament bundle distribution GO:0000146F:microfilament motor activity GO:0005516F:calmodulin binding GO:0005524F:ATP binding GO:0051015F:actin filament binding GO:0005938C:cell cortex GO:0016460C:myosin II complex GO:0032982C:myosin filament GO:0060473C:cortical granule |
EC:EC:5.6.1.8 |
| 5206 |
SRR924338_primary_scf7180002608516_1-918
Len: 917 bp
E-val: 5.7E-31
|
KTF83503.1hypothetical protein cypCar_00048280, partial
|
GO:0048522P:positive regulation of cellular process GO:0051128P:regulation of cellular component organization GO:0043226C:organelle GO:0070161C:anchoring junction |
- |
| 5207 |
SRR924338_primary_scf7180002608580_1-1115
Len: 1,114 bp
E-val: 1.2E-38
|
KTF78494.1hypothetical protein cypCar_00008579
|
GO:0001889P:liver development GO:0007420P:brain development GO:0045901P:positive regulation of translational elongation GO:0045905P:positive regulation of translational termination GO:0046323P:D-glucose import GO:0070837P:dehydroascorbic acid transport GO:0003723F:RNA binding GO:0003746F:translation elongation factor activity GO:0043022F:ribosome binding GO:0055056F:D-glucose transmembrane transporter activity GO:0005789C:endoplasmic reticulum membrane GO:0005886C:plasma membrane GO:0005903C:brush border |
- |
| 5208 |
SRR924338_primary_scf7180002608715_191-882
Len: 691 bp
E-val: 5.4E-58
|
XP_016379033.1PREDICTED: uncharacterized protein LOC107716924
|
GO:0005886C:plasma membrane |
- |
| 5209 |
SRR924338_primary_scf7180002608747_142-1136
Len: 994 bp
E-val: 6.0E-34
|
XP_016113606.1PREDICTED: LOW QUALITY PROTEIN: protein TANC2-like
|
GO:0061001P:regulation of dendritic spine morphogenesis GO:0043197C:dendritic spine |
- |
| 5210 |
SRR924338_primary_scf7180002608823_1-742
Len: 741 bp
E-val: 1.3E-38
|
KTF71813.1hypothetical protein cypCar_00048472, partial
|
GO:0003924F:GTPase activity GO:0005525F:GTP binding |
- |
| 5211 |
SRR924338_primary_scf7180002609064_172-1125
Len: 953 bp
E-val: 4.4E-34
|
XP_018924219.1PREDICTED: retinaldehyde-binding protein 1-like isoform X1
|
GO:0007634P:optokinetic behavior GO:0009416P:response to light stimulus GO:0003676F:nucleic acid binding GO:1902936F:phosphatidylinositol bisphosphate binding GO:0016020C:membrane |
- |
| 5212 |
SRR924338_primary_scf7180002609158_1-695
Len: 694 bp
E-val: 2.7E-113
|
XP_018963478.1PREDICTED: ras-related protein Rab-9A-like
nucleoside-triphosphate phosphatase
|
GO:0015031P:protein transport GO:0032482P:Rab protein signal transduction GO:0042147P:retrograde transport, endosome to Golgi GO:0003924F:GTPase activity GO:0005525F:GTP binding GO:0005764C:lysosome GO:0005770C:late endosome GO:0005829C:cytosol GO:0005886C:plasma membrane GO:0030670C:phagocytic vesicle membrane |
EC:EC:3.6.1.15 |
| 5213 |
SRR924338_primary_scf7180002609345_1-766
Len: 765 bp
E-val: 4.6E-74
|
KTG39968.1hypothetical protein cypCar_00004755
non-specific protein-tyrosine kinase
|
GO:0006338P:chromatin remodeling GO:0006974P:DNA damage response GO:0043687P:post-translational protein modification GO:0004715F:non-membrane spanning protein tyrosine kinase activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0042393F:histone binding GO:0140801F:histone H2AXY142 kinase activity GO:0090535C:WICH complex |
EC:EC:2.7.10.2 |
| 5214 |
SRR924338_primary_scf7180002609375_1-1057
Len: 1,056 bp
E-val: 4.3E-30
|
KTF78563.1hypothetical protein cypCar_00017845
|
GO:0043229C:intracellular organelle |
- |
| 5215 |
SRR924338_primary_scf7180002609463_126-1102
Len: 976 bp
E-val: 3.5E-79
|
KTG42561.1hypothetical protein cypCar_00013813
Forming carbon-oxygen bonds
|
GO:0006399P:tRNA metabolic process GO:0006412P:translation GO:0004812F:aminoacyl-tRNA ligase activity GO:0043167F:ion binding GO:0005737C:cytoplasm GO:0043231C:intracellular membrane-bounded organelle |
EC:EC:6.1.1 |
| 5216 |
SRR924338_primary_scf7180002609699_1-1034
Len: 1,033 bp
E-val: 3.7E-18
|
XP_016379534.1PREDICTED: LOW QUALITY PROTEIN: netrin receptor DCC
|
GO:0001764P:neuron migration GO:0016358P:dendrite development GO:0021960P:anterior commissure morphogenesis GO:0030516P:regulation of axon extension GO:0031103P:axon regeneration GO:0033564P:anterior/posterior axon guidance GO:0048665P:neuron fate specification GO:0048846P:axon extension involved in axon guidance GO:0050918P:positive chemotaxis GO:0071678P:olfactory bulb axon guidance GO:0071679P:commissural neuron axon guidance GO:0098609P:cell-cell adhesion GO:0005515F:protein binding GO:0038006F:netrin receptor activity involved in chemoattraction GO:0005886C:plasma membrane GO:0009986C:cell surface |
- |
| 5217 |
SRR924338_primary_scf7180002609795_288-1032
Len: 744 bp
E-val: 7.8E-103
|
KTG35609.1hypothetical protein cypCar_00030092
heparosan-N-sulfate-glucuronate 5-epimerase
|
GO:0009950P:dorsal/ventral axis specification GO:0015012P:heparan sulfate proteoglycan biosynthetic process GO:0047464F:heparosan-N-sulfate-glucuronate 5-epimerase activity GO:0005794C:Golgi apparatus GO:0016020C:membrane |
EC:EC:5.1.3.17 |
| 5218 |
SRR924338_primary_scf7180002609887_1-1004
Len: 1,003 bp
E-val: 4.8E-31
|
XP_016085598.1PREDICTED: cadherin-23-like
|
GO:0006897P:endocytosis GO:0007156P:homophilic cell-cell adhesion GO:0016477P:cell migration GO:0035678P:neuromast hair cell morphogenesis GO:0050910P:detection of mechanical stimulus involved in sensory perception of sound GO:0050957P:equilibrioception GO:0055085P:transmembrane transport GO:0060117P:auditory receptor cell development GO:0060122P:inner ear receptor cell stereocilium organization GO:0061512P:protein localization to cilium GO:0005509F:calcium ion binding GO:0008013F:beta-catenin binding GO:0022857F:transmembrane transporter activity GO:0045296F:cadherin binding GO:0005911C:cell-cell junction GO:0005929C:cilium GO:0016342C:catenin complex |
- |
| 5219 |
SRR924338_primary_scf7180002609894_1-1184
Len: 1,183 bp
E-val: 5.7E-31
|
KTG40245.1hypothetical protein cypCar_00025482
Acting on peptide bonds (peptidases)
|
GO:0016485P:protein processing GO:0004252F:serine-type endopeptidase activity GO:0000139C:Golgi membrane GO:0005802C:trans-Golgi network |
EC:EC:3.4.21 |
| 5220 |
SRR924338_primary_scf7180002609928_1-1040
Len: 1,039 bp
E-val: 3.2E-30
|
KPP65504.1mediator of RNA polymerase II transcription subunit 25-like
|
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0060021P:roof of mouth development GO:0005667C:transcription regulator complex GO:0016592C:mediator complex |
- |
| 5221 |
SRR924338_primary_scf7180002609953_130-876
Len: 746 bp
E-val: 6.7E-62
|
KTG03769.1hypothetical protein cypCar_00032720, partial
|
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
- |
| 5222 |
SRR924338_primary_scf7180002610071_1-769
Len: 768 bp
E-val: 1.4E-30
|
XP_018926558.1PREDICTED: ras-related protein Rab-11B-like
nucleoside-triphosphate phosphatase
|
GO:0003924F:GTPase activity GO:0005525F:GTP binding |
EC:EC:3.6.1.15 |
| 5223 |
SRR924338_primary_scf7180002610135_1-722
Len: 721 bp
E-val: 6.7E-27
|
XP_016379621.1PREDICTED: vesicular integral-membrane protein VIP36-like
|
GO:0005737C:cytoplasm GO:0043231C:intracellular membrane-bounded organelle |
- |
| 5224 |
SRR924338_primary_scf7180002610251_1-1160
Len: 1,159 bp
E-val: 2.8E-14
|
RXN02453.1phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2
inositol-polyphosphate 5-phosphatase; phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase
|
GO:0007155P:cell adhesion GO:0030509P:BMP signaling pathway GO:0040037P:negative regulation of fibroblast growth factor receptor signaling pathway GO:0043569P:negative regulation of insulin-like growth factor receptor signaling pathway GO:0046856P:phosphatidylinositol dephosphorylation GO:0050776P:regulation of immune response GO:0090024P:negative regulation of neutrophil chemotaxis GO:0003779F:actin binding GO:0004445F:inositol-polyphosphate 5-phosphatase activity GO:0034485F:phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity GO:0005829C:cytosol GO:0005856C:cytoskeleton GO:0016020C:membrane GO:0016607C:nuclear speck GO:0030027C:lamellipodium GO:0030175C:filopodium |
EC:EC:3.1.3.56 EC:EC:3.1.3.86 |
| 5225 |
SRR924338_primary_scf7180002610273_1-827
Len: 826 bp
E-val: 1.2E-72
|
KTG00693.1hypothetical protein cypCar_00025278
DNA helicase; DNA 3'-5' helicase
|
GO:0000727P:double-strand break repair via break-induced replication GO:1902969P:mitotic DNA replication GO:0003697F:single-stranded DNA binding GO:0016787F:hydrolase activity GO:1990518F:single-stranded 3'-5' DNA helicase activity GO:0005634C:nucleus GO:0042555C:MCM complex |
EC:EC:3.6.4.12 EC:EC:5.6.2.4 |