Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 5426 |
SRR924338_primary_scf7180002769128_429-1179
Len: 750 bp
E-val: 1.4E-75
|
KTF87117.1hypothetical protein cypCar_00041357
|
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0002088P:lens development in camera-type eye GO:0006457P:protein folding GO:0003714F:transcription corepressor activity GO:0030544F:Hsp70 protein binding GO:0051082F:unfolded protein binding GO:0005829C:cytosol |
- |
| 5427 |
SRR924338_primary_scf7180002769172_237-857
Len: 620 bp
E-val: 3.1E-36
|
XP_026079407.1pecanex-like protein 1 isoform X1
Acting on peptide bonds (peptidases)
|
EC:EC:3.4 | |
| 5428 |
SRR924338_primary_scf7180002769207_617-1636
Len: 1,019 bp
E-val: 3.6E-183
|
KTG33579.1hypothetical protein cypCar_00020109
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
- |
| 5429 |
SRR924338_primary_scf7180002769211_1-1285
Len: 1,284 bp
E-val: 8.9E-30
|
KTG32088.1hypothetical protein cypCar_00033181
|
-
|
- |
| 5430 |
SRR924338_primary_scf7180002769224_1-1039
Len: 1,038 bp
E-val: 1.2E-8
|
XP_016107316.1PREDICTED: semaphorin-6A
|
-
|
- |
| 5431 |
SRR924338_primary_scf7180002769274_1-1199
Len: 1,198 bp
E-val: 3.1E-37
|
RXN23820.1putative E3 ubiquitin- ligase HECTD4 isoform X1
|
GO:0006644P:phospholipid metabolic process GO:0042593P:glucose homeostasis GO:0050482P:arachidonate secretion GO:0004623F:phospholipase A2 activity GO:0004842F:ubiquitin-protein transferase activity GO:0016874F:ligase activity GO:0005576C:extracellular region |
- |
| 5432 |
SRR924338_primary_scf7180002769344_1-1254
Len: 1,253 bp
E-val: 2.6E-34
|
XP_026106188.1unconventional myosin-XV
|
GO:0005622C:intracellular anatomical structure |
- |
| 5433 |
SRR924338_primary_scf7180002769354_1-947
Len: 946 bp
E-val: 1.2E-44
|
XP_016383009.1PREDICTED: LOW QUALITY PROTEIN: FERM domain-containing protein 4A-like
|
GO:0090162P:establishment of epithelial cell polarity GO:0005737C:cytoplasm GO:0005856C:cytoskeleton GO:0005912C:adherens junction GO:0005923C:bicellular tight junction |
- |
| 5434 |
SRR924338_primary_scf7180002769377_338-991
Len: 653 bp
E-val: 1.6E-120
|
XP_018922617.1PREDICTED: RING finger protein 223-like
Acyltransferases
|
GO:0016567P:protein ubiquitination GO:0008270F:zinc ion binding GO:0061630F:ubiquitin protein ligase activity GO:0016020C:membrane |
EC:EC:2.3.2 |
| 5435 |
SRR924338_primary_scf7180002769420_1-596
Len: 595 bp
E-val: 5.3E-102
|
KTG07423.1hypothetical protein cypCar_00008216
|
GO:0001947P:heart looping GO:0003146P:heart jogging GO:0006357P:regulation of transcription by RNA polymerase II GO:0044458P:motile cilium assembly GO:0060088P:auditory receptor cell stereocilium organization GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
- |
| 5436 |
SRR924338_primary_scf7180002769479_1-1513
Len: 1,512 bp
E-val: 1.1E-18
|
XP_018918332.1PREDICTED: plexin A3-like
|
GO:0003205P:cardiac chamber development GO:0007416P:synapse assembly GO:0008045P:motor neuron axon guidance GO:0030334P:regulation of cell migration GO:0048675P:axon extension GO:0048696P:regulation of collateral sprouting in absence of injury GO:0048755P:branching morphogenesis of a nerve GO:0060272P:embryonic skeletal joint morphogenesis GO:0071526P:semaphorin-plexin signaling pathway GO:0017154F:semaphorin receptor activity GO:0042802F:identical protein binding GO:0002116C:semaphorin receptor complex GO:0005886C:plasma membrane |
- |
| 5437 |
SRR924338_primary_scf7180002769481_559-1055
Len: 496 bp
E-val: 4.0E-31
|
KTF75944.1hypothetical protein cypCar_00025777
Transferring phosphorus-containing groups
|
GO:0004672F:protein kinase activity GO:0005096F:GTPase activator activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0010008C:endosome membrane |
EC:EC:2.7.1 |
| 5438 |
SRR924338_primary_scf7180002769494_267-1220
Len: 953 bp
E-val: 2.4E-32
|
KTG40522.1hypothetical protein cypCar_00002802
|
GO:0050773P:regulation of dendrite development GO:0060074P:synapse maturation GO:0090036P:regulation of protein kinase C signaling GO:0005783C:endoplasmic reticulum GO:0016020C:membrane GO:0043025C:neuronal cell body GO:0043197C:dendritic spine GO:0043198C:dendritic shaft |
- |
| 5439 |
SRR924338_primary_scf7180002769518_1-732
Len: 731 bp
E-val: 3.0E-22
|
XP_027007191.1casein kinase I-like
Transferring phosphorus-containing groups
|
GO:0006338P:chromatin remodeling GO:0008643P:carbohydrate transport GO:0016055P:Wnt signaling pathway GO:0043474P:pigment metabolic process involved in pigmentation GO:0048021P:regulation of melanin biosynthetic process GO:0055085P:transmembrane transport GO:0004676F:3-phosphoinositide-dependent protein kinase activity GO:0004677F:DNA-dependent protein kinase activity GO:0004679F:AMP-activated protein kinase activity GO:0004694F:eukaryotic translation initiation factor 2alpha kinase activity GO:0004711F:ribosomal protein S6 kinase activity GO:0005524F:ATP binding GO:0015293F:symporter activity GO:0035175F:histone H3S10 kinase activity GO:0035402F:histone H3T11 kinase activity GO:0035403F:histone H3T6 kinase activity GO:0035979F:histone H2AXS139 kinase activity GO:0044022F:histone H3S28 kinase activity GO:0044023F:histone H4S1 kinase activity GO:0044024F:histone H2AS1 kinase activity GO:0044025F:histone H2BS14 kinase activity GO:0072354F:histone H3T3 kinase activity GO:0072518F:Rho-dependent protein serine/threonine kinase activity GO:0140823F:histone H2BS36 kinase activity GO:0140855F:histone H3S57 kinase activity GO:0140857F:histone H3T45 kinase activity GO:1990244F:histone H2AT120 kinase activity GO:0005737C:cytoplasm GO:0005886C:plasma membrane |
EC:EC:2.7.11 |
| 5440 |
SRR924338_primary_scf7180002769519_401-1271
Len: 870 bp
E-val: 6.9E-26
|
XP_026137852.1amyloid-like protein 1 isoform X3
|
GO:0031690F:adrenergic receptor binding GO:0110165C:cellular anatomical structure |
- |
| 5441 |
SRR924338_primary_scf7180002769537_1-1425
Len: 1,424 bp
E-val: 1.8E-60
|
XP_026060690.1fibronectin-like
|
GO:0006953P:acute-phase response GO:0007044P:cell-substrate junction assembly GO:0007155P:cell adhesion GO:0007160P:cell-matrix adhesion GO:0007399P:nervous system development GO:0007507P:heart development GO:0008360P:regulation of cell shape GO:0005178F:integrin binding GO:0005201F:extracellular matrix structural constituent GO:0008201F:heparin binding GO:0043394F:proteoglycan binding GO:0005576C:extracellular region GO:0005615C:extracellular space GO:0009986C:cell surface |
- |
| 5442 |
SRR924338_primary_scf7180002769539_1-635
Len: 634 bp
E-val: 2.9E-13
|
RXN05586.1MAPK MAK MRK overlapping kinase isoform X2
Transferring phosphorus-containing groups
|
GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding |
EC:EC:2.7.11 |
| 5443 |
SRR924338_primary_scf7180002769559_316-1224
Len: 908 bp
E-val: 3.8E-168
|
KTG03407.1hypothetical protein cypCar_00004241
|
GO:0008284P:positive regulation of cell population proliferation GO:0043066P:negative regulation of apoptotic process GO:0045596P:negative regulation of cell differentiation GO:0045892P:negative regulation of DNA-templated transcription GO:0005509F:calcium ion binding GO:0005737C:cytoplasm |
- |
| 5444 |
SRR924338_primary_scf7180002769565_1-1608
Len: 1,607 bp
E-val: 5.2E-27
|
AAH67599.1GTP binding protein 4
nucleoside-triphosphate phosphatase
|
GO:0042273P:ribosomal large subunit biogenesis GO:0043252P:sodium-independent organic anion transport GO:0055085P:transmembrane transport GO:0003723F:RNA binding GO:0003924F:GTPase activity GO:0005525F:GTP binding GO:0022857F:transmembrane transporter activity GO:0005730C:nucleolus GO:0016323C:basolateral plasma membrane |
EC:EC:3.6.1.15 |
| 5445 |
SRR924338_primary_scf7180002769573_190-1272
Len: 1,082 bp
E-val: 2.0E-192
|
XP_016113448.1PREDICTED: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
|
GO:0005886C:plasma membrane |
- |
| 5446 |
SRR924338_primary_scf7180002769578_1-906
Len: 905 bp
E-val: 8.7E-40
|
XP_016362502.1PREDICTED: pikachurin-like
|
- | |
| 5447 |
SRR924338_primary_scf7180002769633_1-649
Len: 648 bp
E-val: 9.6E-33
|
XP_016382235.1PREDICTED: 60S acidic ribosomal protein P0, partial
|
GO:0000027P:ribosomal large subunit assembly GO:0002181P:cytoplasmic translation GO:0003735F:structural constituent of ribosome GO:0070180F:large ribosomal subunit rRNA binding GO:0022625C:cytosolic large ribosomal subunit |
- |
| 5448 |
SRR924338_primary_scf7180002769665_1-2234
Len: 2,233 bp
E-val: 8.2E-15
|
CAD60814.1novel protein similar to human ATPase, Class I, type 8B, member 1 (ATP8B1), partial
P-type phospholipid transporter; nucleoside-triphosphate phosphatase
|
GO:0045332P:phospholipid translocation GO:0000287F:magnesium ion binding GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0140326F:ATPase-coupled intramembrane lipid transporter activity GO:0005783C:endoplasmic reticulum GO:0005886C:plasma membrane GO:0055037C:recycling endosome |
EC:EC:7.6.2.1 EC:EC:3.6.1.15 |
| 5449 |
SRR924338_primary_scf7180002769668_482-811
Len: 329 bp
E-val: 4.0E-43
|
KTF88495.1hypothetical protein cypCar_00037786, partial
protein-lysine 6-oxidase
|
GO:0006310P:DNA recombination GO:0015074P:DNA integration GO:0030199P:collagen fibril organization GO:0003677F:DNA binding GO:0004720F:protein-lysine 6-oxidase activity GO:0005507F:copper ion binding GO:0005615C:extracellular space GO:0016020C:membrane |
EC:EC:1.4.3.13 |
| 5450 |
SRR924338_primary_scf7180002769743_1-1116
Len: 1,115 bp
E-val: 1.2E-51
|
XP_018940935.1PREDICTED: LOW QUALITY PROTEIN: thrombospondin-3b-like
|
GO:0007155P:cell adhesion GO:0005509F:calcium ion binding GO:0005576C:extracellular region GO:0062023C:obsolete collagen-containing extracellular matrix |
- |