Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 5676 |
SRR924338_primary_scf7180002780159_1-1050
Len: 1,049 bp
E-val: 7.7E-40
|
KTF81390.1hypothetical protein cypCar_00024257
P-type Ca(2+) transporter; nucleoside-triphosphate phosphatase
|
GO:0051480P:regulation of cytosolic calcium ion concentration GO:0070588P:calcium ion transmembrane transport GO:0005388F:P-type calcium transporter activity GO:0005516F:calmodulin binding GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0030165F:PDZ domain binding GO:0005886C:plasma membrane GO:0043231C:intracellular membrane-bounded organelle |
EC:EC:7.2.2.10 EC:EC:3.6.1.15 |
| 5677 |
SRR924338_primary_scf7180002780182_1-1046
Len: 1,045 bp
E-val: 7.1E-102
|
KTG38020.1hypothetical protein cypCar_00035230, partial
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding |
- |
| 5678 |
SRR924338_primary_scf7180002780321_247-1251
Len: 1,004 bp
E-val: 1.8E-38
|
KTG46094.1hypothetical protein cypCar_00013559
|
- | |
| 5679 |
SRR924338_primary_scf7180002780351_288-790
Len: 502 bp
E-val: 1.8E-71
|
KTG33254.1hypothetical protein cypCar_00001548
|
GO:0032012P:regulation of ARF protein signal transduction GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005543F:phospholipid binding GO:0032587C:ruffle membrane |
- |
| 5680 |
SRR924338_primary_scf7180002780407_1-795
Len: 794 bp
E-val: 1.6E-69
|
XP_016331752.1PREDICTED: bromodomain and WD repeat-containing protein 3-like isoform X1
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007010P:cytoskeleton organization GO:0008360P:regulation of cell shape GO:0005634C:nucleus |
- |
| 5681 |
SRR924338_primary_scf7180002780410_1-724
Len: 723 bp
E-val: 1.2E-31
|
KTG17086.1hypothetical protein cypCar_00000178
|
GO:0006851P:mitochondrial calcium ion transmembrane transport GO:0036444P:calcium import into the mitochondrion GO:0051560P:mitochondrial calcium ion homeostasis GO:0005509F:calcium ion binding GO:0046872F:metal ion binding GO:0005739C:mitochondrion GO:0005743C:mitochondrial inner membrane GO:0005758C:mitochondrial intermembrane space GO:1990246C:uniplex complex |
- |
| 5682 |
SRR924338_primary_scf7180002780430_233-735
Len: 502 bp
E-val: 1.5E-20
|
KTG36093.1hypothetical protein cypCar_00007001
long-chain-fatty-acid--CoA ligase
|
GO:0001579P:medium-chain fatty acid transport GO:0001676P:long-chain fatty acid metabolic process GO:0006281P:DNA repair GO:0044539P:long-chain fatty acid import into cell GO:0005324F:long-chain fatty acid transmembrane transporter activity GO:0090434F:oleoyl-CoA ligase activity GO:0005789C:endoplasmic reticulum membrane GO:0005886C:plasma membrane |
EC:EC:6.2.1.3 |
| 5683 |
SRR924338_primary_scf7180002780526_1-750
Len: 749 bp
E-val: 7.0E-19
|
XP_023990281.1LOW QUALITY PROTEIN: glutamate receptor ionotropic, kainate 4-like, partial
|
GO:0034220P:monoatomic ion transmembrane transport GO:0015276F:ligand-gated monoatomic ion channel activity GO:0038023F:signaling receptor activity GO:0045211C:postsynaptic membrane |
- |
| 5684 |
SRR924338_primary_scf7180002780646_1-822
Len: 821 bp
E-val: 1.6E-29
|
KTG05865.1hypothetical protein cypCar_00018170
poly(A)-specific ribonuclease
|
GO:0006355P:regulation of DNA-templated transcription GO:0016477P:cell migration GO:0032475P:otolith formation GO:0035330P:regulation of hippo signaling GO:0046621P:negative regulation of organ growth GO:0071599P:otic vesicle development GO:0003676F:nucleic acid binding GO:0004535F:poly(A)-specific ribonuclease activity GO:0019900F:kinase binding GO:0060090F:molecular adaptor activity GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0030014C:CCR4-NOT complex |
EC:EC:3.1.13.4 |
| 5685 |
SRR924338_primary_scf7180002780651_731-1058
Len: 327 bp
E-val: 3.3E-21
|
RXM92276.1Transcription factor 7-like 1-B
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0048699P:generation of neurons GO:0060070P:canonical Wnt signaling pathway GO:0060429P:epithelium development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000785C:chromatin GO:1990907C:beta-catenin-TCF complex |
- |
| 5686 |
SRR924338_primary_scf7180002780760_212-595
Len: 383 bp
E-val: 1.5E-30
|
KTF72366.1hypothetical protein cypCar_00047266, partial
|
GO:0000082P:G1/S transition of mitotic cell cycle GO:0000132P:establishment of mitotic spindle orientation GO:0001701P:in utero embryonic development GO:0002042P:cell migration involved in sprouting angiogenesis GO:0006968P:cellular defense response GO:0007156P:homophilic cell-cell adhesion GO:0007160P:cell-matrix adhesion GO:0007229P:integrin-mediated signaling pathway GO:0007517P:muscle organ development GO:0007520P:myoblast fusion GO:0008354P:germ cell migration GO:0008542P:visual learning GO:0010710P:regulation of collagen catabolic process GO:0010763P:positive regulation of fibroblast migration GO:0014850P:response to muscle activity GO:0021943P:formation of radial glial scaffolds GO:0023035P:CD40 signaling pathway GO:0030183P:B cell differentiation GO:0031175P:neuron projection development GO:0031623P:receptor internalization GO:0033631P:cell-cell adhesion mediated by integrin GO:0034113P:heterotypic cell-cell adhesion GO:0035024P:negative regulation of Rho protein signal transduction GO:0035313P:wound healing, spreading of epidermal cells GO:0035633P:maintenance of blood-brain barrier GO:0043065P:positive regulation of apoptotic process GO:0043547P:positive regulation of GTPase activity GO:0045214P:sarcomere organization GO:0045665P:negative regulation of neuron differentiation GO:0045743P:positive regulation of fibroblast growth factor receptor signaling pathway GO:0045766P:positive regulation of angiogenesis GO:0045906P:negative regulation of vasoconstriction GO:0046718P:symbiont entry into host cell GO:0048333P:mesodermal cell differentiation GO:0050901P:leukocyte tethering or rolling GO:0051726P:regulation of cell cycle GO:0051897P:positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction GO:0055007P:cardiac muscle cell differentiation GO:0060379P:cardiac muscle cell myoblast differentiation GO:0060912P:cardiac cell fate specification GO:0071404P:cellular response to low-density lipoprotein particle stimulus GO:0071711P:basement membrane organization GO:0150003P:regulation of spontaneous synaptic transmission GO:1900748P:positive regulation of vascular endothelial growth factor signaling pathway GO:1903078P:positive regulation of protein localization to plasma membrane GO:1905806P:regulation of synapse pruning GO:2000811P:negative regulation of anoikis GO:0000287F:magnesium ion binding GO:0001618F:virus receptor activity GO:0001968F:fibronectin binding GO:0002020F:protease binding GO:0005178F:integrin binding GO:0005509F:calcium ion binding GO:0015026F:coreceptor activity GO:0019960F:C-X3-C chemokine binding GO:0043236F:laminin binding GO:0046982F:protein heterodimerization activity GO:0098639F:collagen binding involved in cell-matrix adhesion GO:1990782F:protein tyrosine kinase binding GO:0005925C:focal adhesion GO:0009897C:external side of plasma membrane GO:0010008C:endosome membrane GO:0030027C:lamellipodium GO:0030175C:filopodium GO:0031594C:neuromuscular junction GO:0032154C:cleavage furrow GO:0032587C:ruffle membrane GO:0034666C:integrin alpha2-beta1 complex GO:0034667C:integrin alpha3-beta1 complex GO:0034668C:integrin alpha4-beta1 complex GO:0034674C:integrin alpha5-beta1 complex GO:0034675C:integrin alpha6-beta1 complex GO:0034677C:integrin alpha7-beta1 complex GO:0034678C:integrin alpha8-beta1 complex GO:0034679C:integrin alpha9-beta1 complex GO:0034680C:integrin alpha10-beta1 complex GO:0034682C:integrin alphav-beta1 complex GO:0035748C:myelin sheath abaxonal region GO:0042383C:sarcolemma GO:0042470C:melanosome GO:0045121C:membrane raft GO:0048471C:perinuclear region of cytoplasm GO:0097060C:synaptic membrane GO:0097386C:glial cell projection GO:0150053C:cerebellar climbing fiber to Purkinje cell synapse |
- |
| 5687 |
SRR924338_primary_scf7180002780983_1-1052
Len: 1,051 bp
E-val: 4.0E-20
|
XP_026103200.1neurobeachin-like, partial
|
GO:0008104P:intracellular protein localization GO:0019901F:protein kinase binding GO:0005829C:cytosol GO:0016020C:membrane |
- |
| 5688 |
SRR924338_primary_scf7180002781069_1-1068
Len: 1,067 bp
E-val: 3.1E-36
|
XP_018929185.1PREDICTED: ADAMTS-like protein 3
|
GO:0030198P:extracellular matrix organization GO:0005576C:extracellular region GO:0031012C:extracellular matrix |
- |
| 5689 |
SRR924338_primary_scf7180002781198_411-993
Len: 582 bp
E-val: 4.9E-44
|
XP_016341936.1PREDICTED: collagen alpha-2(IV) chain-like
|
GO:0030198P:extracellular matrix organization GO:0030020F:extracellular matrix structural constituent conferring tensile strength GO:0005587C:collagen type IV trimer GO:0005615C:extracellular space |
- |
| 5690 |
SRR924338_primary_scf7180002781388_1-1159
Len: 1,158 bp
E-val: 4.0E-82
|
RXN10998.1inositol 1,4,5-trisphosphate receptor type 2
|
GO:0009987P:cellular process GO:0005488F:binding GO:0005783C:endoplasmic reticulum GO:0031090C:organelle membrane GO:0031410C:cytoplasmic vesicle |
- |
| 5691 |
SRR924338_primary_scf7180002781453_1-1092
Len: 1,091 bp
E-val: 1.1E-44
|
XP_026051748.1Bardet-Biedl syndrome 1 protein
|
GO:0001947P:heart looping GO:0003341P:cilium movement GO:0008593P:regulation of Notch signaling pathway GO:0032402P:melanosome transport GO:0033339P:pectoral fin development GO:0035845P:photoreceptor cell outer segment organization GO:0042632P:cholesterol homeostasis GO:0050908P:detection of light stimulus involved in visual perception GO:0060027P:convergent extension involved in gastrulation GO:0060028P:convergent extension involved in axis elongation GO:0060271P:cilium assembly GO:0061469P:regulation of type B pancreatic cell proliferation GO:0070121P:Kupffer's vesicle development GO:0043226C:organelle |
- |
| 5692 |
SRR924338_primary_scf7180002781477_1-817
Len: 816 bp
E-val: 9.6E-30
|
KTG37956.1hypothetical protein cypCar_00005813
|
GO:0016567P:protein ubiquitination GO:0031146P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process GO:0032006P:regulation of TOR signaling GO:0005737C:cytoplasm GO:0019005C:SCF ubiquitin ligase complex |
- |
| 5693 |
SRR924338_primary_scf7180002781597_1-110
Len: 109 bp
E-val: 4.3E-10
|
XP_018969052.1PREDICTED: adhesion G protein-coupled receptor L2-like
|
GO:0007166P:cell surface receptor signaling pathway GO:0007189P:adenylate cyclase-activating G protein-coupled receptor signaling pathway GO:0004930F:G protein-coupled receptor activity GO:0030246F:carbohydrate binding GO:0005886C:plasma membrane |
- |
| 5694 |
SRR924338_primary_scf7180002781600_1-812
Len: 811 bp
E-val: 1.1E-49
|
XP_026091402.1helicase ARIP4 isoform X1
|
GO:0006325P:chromatin organization GO:0140640F:catalytic activity, acting on a nucleic acid GO:0140657F:ATP-dependent activity |
- |
| 5695 |
SRR924338_primary_scf7180002781665_1-1191
Len: 1,190 bp
E-val: 3.1E-45
|
XP_018918614.1PREDICTED: LOW QUALITY PROTEIN: multidrug resistance-associated protein 1-like
|
GO:0006869P:lipid transport GO:0034775P:glutathione transmembrane transport GO:0042908P:xenobiotic transport GO:0055085P:transmembrane transport GO:0005524F:ATP binding GO:0008559F:ABC-type xenobiotic transporter activity GO:0016787F:hydrolase activity GO:0016887F:ATP hydrolysis activity GO:0034634F:glutathione transmembrane transporter activity GO:0140359F:ABC-type transporter activity GO:0005886C:plasma membrane GO:0016020C:membrane GO:0016323C:basolateral plasma membrane |
- |
| 5696 |
SRR924338_primary_scf7180002781818_175-1099
Len: 924 bp
E-val: 1.3E-67
|
KTF80463.1hypothetical protein cypCar_00035776
|
GO:0001501P:skeletal system development GO:0030282P:bone mineralization GO:0048570P:notochord morphogenesis GO:0005201F:extracellular matrix structural constituent GO:0005576C:extracellular region |
- |
| 5697 |
SRR924338_primary_scf7180002781860_1-1363
Len: 1,362 bp
E-val: 1.2E-24
|
XP_026081825.1TNF receptor-associated factor 4-like
|
GO:0002072P:optic cup morphogenesis involved in camera-type eye development GO:0003405P:optic vesicle elongation GO:0007166P:cell surface receptor signaling pathway GO:0042981P:regulation of apoptotic process GO:0043122P:regulation of canonical NF-kappaB signal transduction GO:0045198P:establishment of epithelial cell apical/basal polarity GO:0046330P:positive regulation of JNK cascade GO:0005164F:tumor necrosis factor receptor binding GO:0008270F:zinc ion binding GO:0031625F:ubiquitin protein ligase binding GO:0035591F:signaling adaptor activity GO:0005737C:cytoplasm |
- |
| 5698 |
SRR924338_primary_scf7180002781920_1-817
Len: 816 bp
E-val: 2.2E-10
|
XP_018936731.1PREDICTED: T-cell immunomodulatory protein-like
|
GO:0005886C:plasma membrane |
- |
| 5699 |
SRR924338_primary_scf7180002781987_267-1199
Len: 932 bp
E-val: 1.1E-69
|
KTG37773.1hypothetical protein cypCar_00004725
|
GO:0010468P:regulation of gene expression |
- |
| 5700 |
SRR924338_primary_scf7180002782243_353-1171
Len: 818 bp
E-val:
|
-
|
-
|
- |