Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 5801 |
SRR924338_primary_scf7180003058204_1-959
Len: 958 bp
E-val: 1.1E-19
|
XP_026069543.1atherin-like
|
GO:0006325P:chromatin organization GO:0045892P:negative regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0003682F:chromatin binding GO:0042393F:histone binding GO:0005634C:nucleus |
- |
| 5802 |
SRR924338_primary_scf7180003058211_225-899
Len: 674 bp
E-val: 1.9E-124
|
XP_018947749.1PREDICTED: olfactomedin-4-like isoform X1
|
GO:0007165P:signal transduction GO:0005615C:extracellular space |
- |
| 5803 |
SRR924338_primary_scf7180003058216_199-1073
Len: 874 bp
E-val: 3.7E-27
|
XP_016145472.1PREDICTED: kinesin-like protein KIF22
Isomerases altering macromolecular conformation; nucleoside-triphosphate phosphatase
|
GO:0000281P:mitotic cytokinesis GO:0001756P:somitogenesis GO:0001966P:thigmotaxis GO:0007018P:microtubule-based movement GO:0007052P:mitotic spindle organization GO:0007420P:brain development GO:0021952P:central nervous system projection neuron axonogenesis GO:0045184P:establishment of protein localization GO:0048592P:eye morphogenesis GO:0051231P:spindle elongation GO:0051896P:regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction GO:0003677F:DNA binding GO:0003777F:microtubule motor activity GO:0005524F:ATP binding GO:0008017F:microtubule binding GO:0016887F:ATP hydrolysis activity GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005871C:kinesin complex GO:0005874C:microtubule GO:0016020C:membrane GO:0030496C:midbody |
EC:EC:5.6.1 EC:EC:3.6.1.15 |
| 5804 |
SRR924338_primary_scf7180003058228_127-885
Len: 758 bp
E-val: 8.4E-137
|
XP_016296100.1PREDICTED: protein phosphatase 1 regulatory subunit 3G-like
|
GO:0005979P:regulation of glycogen biosynthetic process GO:0008157F:protein phosphatase 1 binding GO:2001069F:glycogen binding GO:0000164C:protein phosphatase type 1 complex |
- |
| 5805 |
SRR924338_primary_scf7180003058237_1-1021
Len: 1,020 bp
E-val: 3.0E-36
|
KTF93267.1hypothetical protein cypCar_00048249, partial
receptor protein-tyrosine kinase
|
GO:0002040P:sprouting angiogenesis GO:0006094P:gluconeogenesis GO:0006096P:glycolytic process GO:0007173P:epidermal growth factor receptor signaling pathway GO:0008286P:insulin receptor signaling pathway GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0042593P:glucose homeostasis GO:0043009P:chordate embryonic development GO:0043410P:positive regulation of MAPK cascade GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0048589P:developmental growth GO:0051897P:positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005524F:ATP binding GO:0008288F:boss receptor activity GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0043548F:phosphatidylinositol 3-kinase binding GO:0043560F:insulin receptor substrate binding GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0005899C:insulin receptor complex GO:0012505C:endomembrane system GO:0030424C:axon |
EC:EC:2.7.10.1 |
| 5806 |
SRR924338_primary_scf7180003058261_442-919
Len: 477 bp
E-val: 1.7E-39
|
XP_016339741.1PREDICTED: alpha-taxilin-like isoform X2
|
GO:0001732P:formation of cytoplasmic translation initiation complex GO:0003743F:translation initiation factor activity GO:0019905F:syntaxin binding GO:0005852C:eukaryotic translation initiation factor 3 complex GO:0016282C:eukaryotic 43S preinitiation complex GO:0033290C:eukaryotic 48S preinitiation complex |
- |
| 5807 |
SRR924338_primary_scf7180003058334_410-885
Len: 475 bp
E-val: 4.3E-38
|
XP_016146157.1PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A-like
exodeoxyribonuclease I; DNA-directed DNA polymerase
|
GO:0000278P:mitotic cell cycle GO:0006272P:leading strand elongation GO:0006287P:base-excision repair, gap-filling GO:0006297P:nucleotide-excision repair, DNA gap filling GO:0045004P:DNA replication proofreading GO:0071897P:DNA biosynthetic process GO:0000166F:nucleotide binding GO:0003677F:DNA binding GO:0003887F:DNA-directed DNA polymerase activity GO:0008270F:zinc ion binding GO:0008310F:single-stranded DNA 3'-5' DNA exonuclease activity GO:0051539F:4 iron, 4 sulfur cluster binding GO:0008622C:epsilon DNA polymerase complex |
EC:EC:3.1.11.1 EC:EC:2.7.7.7 |
| 5808 |
SRR924338_primary_scf7180003058387_1-815
Len: 814 bp
E-val: 3.2E-33
|
ROI16383.1DNA replication licensing factor mcm4
DNA helicase; DNA 3'-5' helicase; nucleoside-triphosphate phosphatase
|
GO:0000727P:double-strand break repair via break-induced replication GO:0001878P:response to yeast GO:0006271P:DNA strand elongation involved in DNA replication GO:1902975P:mitotic DNA replication initiation GO:0003682F:chromatin binding GO:0003697F:single-stranded DNA binding GO:0005524F:ATP binding GO:0009378F:four-way junction helicase activity GO:0016887F:ATP hydrolysis activity GO:0036121F:double-stranded DNA helicase activity GO:0061749F:forked DNA-dependent helicase activity GO:1990518F:single-stranded 3'-5' DNA helicase activity GO:0005634C:nucleus GO:0042555C:MCM complex |
EC:EC:3.6.4.12 EC:EC:5.6.2.4 EC:EC:3.6.1.15 |
| 5809 |
SRR924338_primary_scf7180003058451_39-991
Len: 952 bp
E-val: 6.7E-59
|
KTF77338.1hypothetical protein cypCar_00030719, partial
|
- | |
| 5810 |
SRR924338_primary_scf7180003058461_1-819
Len: 818 bp
E-val: 1.3E-23
|
KTG05912.1hypothetical protein cypCar_00005980
|
GO:0015701P:bicarbonate transport GO:0019532P:oxalate transport GO:0035725P:sodium ion transmembrane transport GO:1902358P:sulfate transmembrane transport GO:1902476P:chloride transmembrane transport GO:0008271F:secondary active sulfate transmembrane transporter activity GO:0008510F:sodium:bicarbonate symporter activity GO:0015108F:chloride transmembrane transporter activity GO:0019531F:oxalate transmembrane transporter activity GO:0005886C:plasma membrane |
- |
| 5811 |
SRR924338_primary_scf7180003116818_193-3254
Len: 3,061 bp
E-val: 0.0
|
KTF72734.1hypothetical protein cypCar_00045984
|
GO:0090314P:positive regulation of protein targeting to membrane GO:0044325F:transmembrane transporter binding GO:0005886C:plasma membrane |
- |
| 5812 |
SRR924338_primary_scf7180003117203_224-1645
Len: 1,421 bp
E-val: 2.2E-85
|
KTF93729.1hypothetical protein cypCar_00029637
Catalysing the translocation of inorganic cations; nucleoside-triphosphate phosphatase
|
GO:0006635P:fatty acid beta-oxidation GO:0007031P:peroxisome organization GO:0015910P:long-chain fatty acid import into peroxisome GO:0042760P:very long-chain fatty acid catabolic process GO:0005324F:long-chain fatty acid transmembrane transporter activity GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0140359F:ABC-type transporter activity GO:0005778C:peroxisomal membrane |
EC:EC:7.2.2 EC:EC:3.6.1.15 |
| 5813 |
SRR924340_primary_scf7180002421045_237-1097
Len: 860 bp
E-val: 3.6E-152
|
XP_018976037.1PREDICTED: uncharacterized protein LOC109107214
|
GO:0007219P:Notch signaling pathway GO:0048731P:system development GO:0005112F:Notch binding GO:0005509F:calcium ion binding |
- |
| 5814 |
SRR924340_primary_scf7180002421101_4175-4846
Len: 671 bp
E-val: 2.5E-76
|
ROL44854.1LINE-1 retrotransposable element ORF1 protein
|
GO:0006891P:intra-Golgi vesicle-mediated transport GO:0015031P:protein transport GO:0000139C:Golgi membrane GO:0017119C:Golgi transport complex |
- |
| 5815 |
SRR924340_primary_scf7180002421152_125-3772
Len: 3,647 bp
E-val: 0.0
|
XP_026054529.1uncharacterized protein K02A2.6-like
Acting on peptide bonds (peptidases); RNA-directed DNA polymerase
|
GO:0006278P:RNA-templated DNA biosynthetic process GO:0006508P:proteolysis GO:0015074P:DNA integration GO:0003676F:nucleic acid binding GO:0003964F:RNA-directed DNA polymerase activity GO:0004190F:aspartic-type endopeptidase activity GO:0004519F:endonuclease activity |
EC:EC:3.4.23 EC:EC:2.7.7.49 |
| 5816 |
SRR924340_primary_scf7180002421165_4681-4944
Len: 263 bp
E-val: 2.8E-15
|
XP_013856279.1PREDICTED: uncharacterized protein LOC106512146
|
GO:0005488F:binding |
- |
| 5817 |
SRR924340_primary_scf7180002421199_733-1725
Len: 992 bp
E-val: 1.7E-97
|
XP_021334226.1nephrocystin-4-like
Hydrolases
|
EC:EC:3 | |
| 5818 |
SRR924340_primary_scf7180002421199_2004-3852
Len: 1,848 bp
E-val: 2.7E-290
|
XP_021333806.1uncharacterized protein lrfn4b isoform X1
Acting on peptide bonds (peptidases); RNA-directed DNA polymerase
|
GO:0006278P:RNA-templated DNA biosynthetic process GO:0006508P:proteolysis GO:0015074P:DNA integration GO:0003676F:nucleic acid binding GO:0003964F:RNA-directed DNA polymerase activity GO:0004190F:aspartic-type endopeptidase activity GO:0004519F:endonuclease activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
EC:EC:3.4.23 EC:EC:2.7.7.49 |
| 5819 |
SRR924340_primary_scf7180002421238_1-4084
Len: 4,083 bp
E-val: 1.6E-266
|
XP_019204289.1uncharacterized protein LOC102076140 isoform X1
|
GO:0006259P:DNA metabolic process GO:0006278P:RNA-templated DNA biosynthetic process GO:0006508P:proteolysis GO:0015074P:DNA integration GO:0003676F:nucleic acid binding GO:0003964F:RNA-directed DNA polymerase activity GO:0004190F:aspartic-type endopeptidase activity GO:0004519F:endonuclease activity GO:0008270F:zinc ion binding |
- |
| 5820 |
SRR924340_primary_scf7180002421338_146-1027
Len: 881 bp
E-val: 9.9E-65
|
RXN22433.1LINE-1 type transposase domain-containing 1
|
GO:0032501P:multicellular organismal process |
- |
| 5821 |
SRR924340_primary_scf7180002421354_546-3565
Len: 3,019 bp
E-val: 0.0
|
XP_026116261.1uncharacterized protein LOC113094857
DNA helicase; DNA 3'-5' helicase; ubiquitinyl hydrolase 1
|
GO:0000723P:telomere maintenance GO:0006281P:DNA repair GO:0006310P:DNA recombination GO:0016579P:protein deubiquitination GO:0004843F:cysteine-type deubiquitinase activity GO:0005524F:ATP binding GO:0009378F:four-way junction helicase activity GO:0036121F:double-stranded DNA helicase activity GO:0061749F:forked DNA-dependent helicase activity GO:1990518F:single-stranded 3'-5' DNA helicase activity |
EC:EC:3.6.4.12 EC:EC:5.6.2.4 EC:EC:3.4.19.12 |
| 5822 |
SRR924340_primary_scf7180002421397_696-2558
Len: 1,862 bp
E-val: 6.0E-136
|
CBN81178.1Pol polyprotein
|
GO:0006259P:DNA metabolic process GO:0005488F:binding GO:0140640F:catalytic activity, acting on a nucleic acid |
- |
| 5823 |
SRR924340_primary_scf7180002421397_2641-3332
Len: 691 bp
E-val: 5.2E-85
|
CBN81175.1Pol polyprotein
Acting on peptide bonds (peptidases); RNA-directed DNA polymerase
|
GO:0006278P:RNA-templated DNA biosynthetic process GO:0006508P:proteolysis GO:0015074P:DNA integration GO:0003676F:nucleic acid binding GO:0003964F:RNA-directed DNA polymerase activity GO:0004190F:aspartic-type endopeptidase activity GO:0004519F:endonuclease activity GO:0005634C:nucleus |
EC:EC:3.4.23 EC:EC:2.7.7.49 |
| 5824 |
SRR924340_primary_scf7180002421438_1-1961
Len: 1,960 bp
E-val: 2.4E-119
|
XP_027897084.1uncharacterized protein LOC114159164 isoform X1
|
GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
- |
| 5825 |
SRR924340_primary_scf7180002421510_6-4007
Len: 4,001 bp
E-val: 0.0
|
XP_018920792.1PREDICTED: uncharacterized protein K02A2.6-like
Acting on peptide bonds (peptidases); RNA-directed DNA polymerase
|
GO:0006278P:RNA-templated DNA biosynthetic process GO:0006508P:proteolysis GO:0015074P:DNA integration GO:0003676F:nucleic acid binding GO:0003964F:RNA-directed DNA polymerase activity GO:0004190F:aspartic-type endopeptidase activity GO:0004519F:endonuclease activity GO:0008270F:zinc ion binding |
EC:EC:3.4.23 EC:EC:2.7.7.49 |