Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 5826 |
SRR924340_primary_scf7180002421700_52-2040
Len: 1,988 bp
E-val: 2.4E-239
|
RXN13515.1gypsy-16 si
Hydrolases
|
GO:0006259P:DNA metabolic process GO:0005488F:binding GO:0016787F:hydrolase activity GO:0140640F:catalytic activity, acting on a nucleic acid |
EC:EC:3 |
| 5827 |
SRR924340_primary_scf7180002421796_1769-3505
Len: 1,736 bp
E-val: 2.6E-298
|
RXN02216.1Transposon Ty3-I Gag-Pol poly
Hydrolases; RNA-directed DNA polymerase
|
GO:0006278P:RNA-templated DNA biosynthetic process GO:0015074P:DNA integration GO:0003676F:nucleic acid binding GO:0003964F:RNA-directed DNA polymerase activity GO:0004519F:endonuclease activity GO:0016787F:hydrolase activity GO:0046872F:metal ion binding |
EC:EC:3 EC:EC:2.7.7.49 |
| 5828 |
SRR924340_primary_scf7180002421994_2283-2975
Len: 692 bp
E-val: 1.4E-69
|
XP_025758531.1uncharacterized protein LOC112843773
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003676F:nucleic acid binding GO:0008270F:zinc ion binding GO:0005634C:nucleus |
- |
| 5829 |
SRR924340_primary_scf7180002421997_1616-2569
Len: 953 bp
E-val: 6.4E-126
|
XP_026065846.1CREB-binding protein-like isoform X1
histone acetyltransferase
|
GO:0006338P:chromatin remodeling GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048511P:rhythmic process GO:0003713F:transcription coactivator activity GO:0008270F:zinc ion binding GO:0031490F:chromatin DNA binding GO:0032931F:histone H3K56 acetyltransferase activity GO:0036408F:histone H3K14 acetyltransferase activity GO:0043992F:histone H3K9 acetyltransferase activity GO:0043993F:histone H3K18 acetyltransferase activity GO:0043994F:histone H3K23 acetyltransferase activity GO:0043995F:histone H4K5 acetyltransferase activity GO:0043996F:histone H4K8 acetyltransferase activity GO:0043997F:histone H4K12 acetyltransferase activity GO:0043999F:histone H2AK5 acetyltransferase activity GO:0044012F:histone H2AK9 acetyltransferase activity GO:0044014F:histone H2BK5 acetyltransferase activity GO:0044015F:histone H2BK12 acetyltransferase activity GO:0044016F:histone H3K4 acetyltransferase activity GO:0044017F:histone H3K27 acetyltransferase activity GO:0044018F:histone H3K36 acetyltransferase activity GO:0046972F:histone H4K16 acetyltransferase activity GO:0140297F:DNA-binding transcription factor binding GO:0140908F:histone H3K122 acetyltransferase activity GO:0000123C:histone acetyltransferase complex GO:0005654C:nucleoplasm GO:0005667C:transcription regulator complex GO:0005737C:cytoplasm |
EC:EC:2.3.1.48 |
| 5830 |
SRR924340_primary_scf7180002422133_1108-1515
Len: 407 bp
E-val: 1.2E-68
|
KTG07099.1hypothetical protein cypCar_00040603
peptidylprolyl isomerase
|
GO:0003755F:peptidyl-prolyl cis-trans isomerase activity |
EC:EC:5.2.1.8 |
| 5831 |
SRR924340_primary_scf7180002422449_285-1465
Len: 1,180 bp
E-val: 4.7E-86
|
XP_018944488.1PREDICTED: zinc finger protein 423-like
|
GO:0003676F:nucleic acid binding GO:0008270F:zinc ion binding |
- |
| 5832 |
SRR924340_primary_scf7180002422450_32-2248
Len: 2,216 bp
E-val: 8.1E-289
|
XP_025760976.1uncharacterized protein K02A2.6-like
|
-
|
- |
| 5833 |
SRR924340_primary_scf7180002422453_510-2861
Len: 2,351 bp
E-val: 2.6E-293
|
BAD04858.1reverse transcriptase
RNA-directed DNA polymerase
|
GO:0006278P:RNA-templated DNA biosynthetic process GO:0003964F:RNA-directed DNA polymerase activity |
EC:EC:2.7.7.49 |
| 5834 |
SRR924340_primary_scf7180002422470_1-2043
Len: 2,042 bp
E-val: 1.4E-165
|
XP_016091401.1PREDICTED: CREB-binding protein-like
histone acetyltransferase
|
GO:0006355P:regulation of DNA-templated transcription GO:0005488F:binding GO:0010484F:histone H3 acetyltransferase activity GO:0010485F:histone H4 acetyltransferase activity GO:0043998F:histone H2A acetyltransferase activity GO:0044013F:histone H2B acetyltransferase activity GO:0031981C:nuclear lumen GO:0032991C:protein-containing complex |
EC:EC:2.3.1.48 |
| 5835 |
SRR924340_primary_scf7180002422472_288-2670
Len: 2,382 bp
E-val: 3.4E-152
|
XP_026105483.1zinc finger BED domain-containing protein 4-like
|
GO:0005488F:binding GO:0005634C:nucleus |
- |
| 5836 |
SRR924340_primary_scf7180002422522_442-1536
Len: 1,094 bp
E-val: 2.9E-114
|
BAC82610.1gag-like protein
|
GO:0003676F:nucleic acid binding GO:0008270F:zinc ion binding |
- |
| 5837 |
SRR924340_primary_scf7180002422557_1-1474
Len: 1,473 bp
E-val: 1.6E-83
|
KTF87786.1hypothetical protein cypCar_00031300
|
GO:0031144P:proteasome localization GO:0071630P:nuclear protein quality control by the ubiquitin-proteasome system GO:1903119P:protein localization to actin cytoskeleton GO:0005634C:nucleus GO:0015629C:actin cytoskeleton |
- |
| 5838 |
SRR924340_primary_scf7180002422703_215-1270
Len: 1,055 bp
E-val: 3.1E-182
|
XP_016344883.1PREDICTED: zinc finger protein 862-like
|
GO:0046983F:protein dimerization activity GO:0016020C:membrane |
- |
| 5839 |
SRR924340_primary_scf7180002422747_253-1287
Len: 1,034 bp
E-val: 6.4E-156
|
XP_018952193.1PREDICTED: zinc finger MYM-type protein 1-like
|
GO:0046983F:protein dimerization activity GO:0005737C:cytoplasm |
- |
| 5840 |
SRR924340_primary_scf7180002422770_1-1865
Len: 1,864 bp
E-val: 2.4E-116
|
XP_016348382.1PREDICTED: kelch-like protein 8
|
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0030246F:carbohydrate binding GO:1990756F:ubiquitin-like ligase-substrate adaptor activity GO:0005737C:cytoplasm GO:0016020C:membrane GO:0031463C:Cul3-RING ubiquitin ligase complex |
- |
| 5841 |
SRR924340_primary_scf7180002422940_881-1303
Len: 422 bp
E-val: 3.5E-60
|
XP_018927369.1PREDICTED: uncharacterized protein LOC109054573
|
- | |
| 5842 |
SRR924340_primary_scf7180002423023_1-1835
Len: 1,834 bp
E-val: 1.1E-102
|
XP_018945100.1PREDICTED: zinc finger BED domain-containing protein 1-like
|
GO:0005488F:binding |
- |
| 5843 |
SRR924340_primary_scf7180002423039_632-1390
Len: 758 bp
E-val: 3.2E-64
|
XP_026054529.1uncharacterized protein K02A2.6-like
|
GO:0006259P:DNA metabolic process GO:0003824F:catalytic activity |
- |
| 5844 |
SRR924340_primary_scf7180002423068_244-1825
Len: 1,581 bp
E-val: 7.7E-108
|
XP_018980735.1PREDICTED: uncharacterized protein LOC109112197
|
GO:0043170P:macromolecule metabolic process GO:0044238P:primary metabolic process GO:0003824F:catalytic activity |
- |
| 5845 |
SRR924340_primary_scf7180002423139_103-726
Len: 623 bp
E-val: 1.1E-41
|
XP_026059217.1histone H1-like
|
GO:0006334P:nucleosome assembly GO:0003677F:DNA binding GO:0030527F:structural constituent of chromatin GO:0000786C:nucleosome GO:0005634C:nucleus |
- |
| 5846 |
SRR924340_primary_scf7180002423187_715-1108
Len: 393 bp
E-val: 1.5E-20
|
ROL54778.1Myosin heavy chain, fast skeletal muscle
|
GO:0006936P:muscle contraction GO:0048856P:anatomical structure development GO:0005515F:protein binding GO:0043232C:intracellular membraneless organelle |
- |
| 5847 |
SRR924340_primary_scf7180002423420_979-2005
Len: 1,026 bp
E-val: 1.0E-121
|
XP_018956423.1PREDICTED: zinc finger BED domain-containing protein 1-like, partial
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
- |
| 5848 |
SRR924340_primary_scf7180002423444_1-1350
Len: 1,349 bp
E-val: 2.0E-128
|
XP_026113774.1zinc finger BED domain-containing protein 1-like
|
GO:0003677F:DNA binding GO:0008270F:zinc ion binding GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
- |
| 5849 |
SRR924340_primary_scf7180002423456_1-1336
Len: 1,335 bp
E-val: 7.1E-30
|
XP_018970890.1PREDICTED: adhesion G protein-coupled receptor E3-like
|
GO:0007166P:cell surface receptor signaling pathway GO:0007186P:G protein-coupled receptor signaling pathway GO:0007189P:adenylate cyclase-activating G protein-coupled receptor signaling pathway GO:0004930F:G protein-coupled receptor activity GO:0005886C:plasma membrane GO:0016020C:membrane |
- |
| 5850 |
SRR924340_primary_scf7180002423459_1-1015
Len: 1,014 bp
E-val: 1.5E-27
|
XP_018968252.1PREDICTED: prostasin-like
Acting on peptide bonds (peptidases)
|
GO:0006508P:proteolysis GO:0004252F:serine-type endopeptidase activity |
EC:EC:3.4.21 |