Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 5851 |
SRR924340_primary_scf7180002423500_1-1304
Len: 1,303 bp
E-val: 1.8E-123
|
XP_016365163.1PREDICTED: E3 ubiquitin-protein ligase TRIM39-like isoform X1
|
GO:0016020C:membrane |
- |
| 5852 |
SRR924340_primary_scf7180002423662_86-1249
Len: 1,163 bp
E-val: 1.4E-175
|
XP_026103388.1uncharacterized protein LOC113074878
|
GO:0005488F:binding GO:0005634C:nucleus |
- |
| 5853 |
SRR924340_primary_scf7180002423722_24-801
Len: 777 bp
E-val: 1.1E-51
|
KTF71634.1hypothetical protein cypCar_00049161
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0021534P:cell proliferation in hindbrain GO:0021592P:fourth ventricle development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
- |
| 5854 |
SRR924340_primary_scf7180002423768_115-1289
Len: 1,174 bp
E-val: 9.2E-175
|
XP_005751641.1PREDICTED: pogo transposable element with KRAB domain
|
GO:0003677F:DNA binding GO:0005634C:nucleus |
- |
| 5855 |
SRR924340_primary_scf7180002423816_714-1274
Len: 560 bp
E-val: 1.1E-77
|
XP_016422359.1PREDICTED: zinc finger BED domain-containing protein 4-like isoform X1
|
GO:0005488F:binding |
- |
| 5856 |
SRR924340_primary_scf7180002424035_890-1187
Len: 297 bp
E-val: 6.9E-10
|
XP_018959062.1PREDICTED: delta-like protein D
|
-
|
- |
| 5857 |
SRR924340_primary_scf7180002424207_209-890
Len: 681 bp
E-val: 5.3E-58
|
XP_018956873.1PREDICTED: macrophage mannose receptor 1-like
|
-
|
- |
| 5858 |
SRR924340_primary_scf7180002424261_1-866
Len: 865 bp
E-val: 1.5E-25
|
RXN19457.1BTB POZ domain-containing KCTD3-like protein
|
GO:0051260P:protein homooligomerization |
- |
| 5859 |
SRR924340_primary_scf7180002424262_120-1099
Len: 979 bp
E-val: 5.3E-176
|
XP_018959967.1PREDICTED: trace amine-associated receptor 13c-like, partial
|
GO:0007186P:G protein-coupled receptor signaling pathway GO:0009995P:soluble molecule recognition GO:0050911P:detection of chemical stimulus involved in sensory perception of smell GO:1990834P:response to odorant GO:0001594F:trace-amine receptor activity GO:0004984F:olfactory receptor activity GO:0019810F:putrescine binding GO:0005886C:plasma membrane |
- |
| 5860 |
SRR924340_primary_scf7180002424270_1-691
Len: 690 bp
E-val: 2.1E-38
|
XP_018961382.1PREDICTED: microfibril-associated glycoprotein 4-like, partial
|
- | |
| 5861 |
SRR924340_primary_scf7180002424306_321-1330
Len: 1,009 bp
E-val: 5.2E-17
|
XP_018967026.1PREDICTED: A disintegrin and metalloproteinase with thrombospondin motifs 6-like
Acting on peptide bonds (peptidases)
|
GO:0006508P:proteolysis GO:0007229P:integrin-mediated signaling pathway GO:0030198P:extracellular matrix organization GO:0004222F:metalloendopeptidase activity GO:0046872F:metal ion binding GO:0005576C:extracellular region GO:0031012C:extracellular matrix |
EC:EC:3.4.24 |
| 5862 |
SRR924340_primary_scf7180002424320_347-958
Len: 611 bp
E-val: 2.3E-28
|
KTG03685.1hypothetical protein cypCar_00032126
DNA helicase; DNA 3'-5' helicase; nucleoside-triphosphate phosphatase
|
GO:0000727P:double-strand break repair via break-induced replication GO:0006270P:DNA replication initiation GO:0006271P:DNA strand elongation involved in DNA replication GO:1902017P:regulation of cilium assembly GO:0003697F:single-stranded DNA binding GO:0005524F:ATP binding GO:0009378F:four-way junction helicase activity GO:0016887F:ATP hydrolysis activity GO:0036121F:double-stranded DNA helicase activity GO:0061749F:forked DNA-dependent helicase activity GO:1990518F:single-stranded 3'-5' DNA helicase activity GO:0005634C:nucleus GO:0042555C:MCM complex |
EC:EC:3.6.4.12 EC:EC:5.6.2.4 EC:EC:3.6.1.15 |
| 5863 |
SRR924340_primary_scf7180002424336_1-1201
Len: 1,200 bp
E-val: 1.6E-129
|
XP_016098226.1PREDICTED: plectin-like
|
GO:0007519P:skeletal muscle tissue development GO:0007626P:locomotory behavior GO:0030239P:myofibril assembly GO:0031581P:hemidesmosome assembly GO:0042060P:wound healing GO:0045104P:intermediate filament cytoskeleton organization GO:0003779F:actin binding GO:0005200F:structural constituent of cytoskeleton GO:0008307F:structural constituent of muscle GO:0030506F:ankyrin binding GO:0045296F:cadherin binding GO:0005882C:intermediate filament GO:0005925C:focal adhesion GO:0030056C:hemidesmosome GO:0042383C:sarcolemma GO:0042995C:cell projection GO:0048471C:perinuclear region of cytoplasm |
- |
| 5864 |
SRR924340_primary_scf7180002424979_756-1636
Len: 880 bp
E-val: 9.3E-55
|
XP_016366126.1PREDICTED: probable E3 ubiquitin-protein ligase HERC4
|
GO:0006511P:ubiquitin-dependent protein catabolic process GO:0016567P:protein ubiquitination GO:0004842F:ubiquitin-protein transferase activity GO:0016874F:ligase activity GO:0061630F:ubiquitin protein ligase activity GO:0005737C:cytoplasm |
- |
| 5865 |
SRR924340_primary_scf7180002424991_780-1453
Len: 673 bp
E-val: 1.0E-77
|
XP_018925785.1PREDICTED: NXPE family member 3-like
|
GO:0007399P:nervous system development GO:0016020C:membrane |
- |
| 5866 |
SRR924340_primary_scf7180002425248_1-1007
Len: 1,006 bp
E-val: 2.0E-45
|
XP_018946512.1PREDICTED: inter-alpha-trypsin inhibitor heavy chain H3-like isoform X1
|
GO:0007186P:G protein-coupled receptor signaling pathway GO:0004930F:G protein-coupled receptor activity GO:0016020C:membrane |
- |
| 5867 |
SRR924340_primary_scf7180002426055_1-1068
Len: 1,067 bp
E-val: 8.7E-23
|
XP_026140200.1integrin alpha-10-like
|
GO:0007160P:cell-matrix adhesion GO:0007229P:integrin-mediated signaling pathway GO:0033627P:cell adhesion mediated by integrin GO:0098609P:cell-cell adhesion GO:0005178F:integrin binding GO:0046872F:metal ion binding GO:0008305C:integrin complex GO:0009897C:external side of plasma membrane |
- |
| 5868 |
SRR924340_primary_scf7180002426816_1-1254
Len: 1,253 bp
E-val: 1.4E-83
|
KTG40971.1hypothetical protein cypCar_00017380
NAD(P)H oxidase (H2O2-forming); Acting on paired donors, with incorporation or reduction of molecular oxygen. The oxygen incorporated need not be derived from O2
|
GO:0006629P:lipid metabolic process GO:0004499F:N,N-dimethylaniline monooxygenase activity GO:0016174F:NAD(P)H oxidase H2O2-forming activity GO:0047822F:hypotaurine monooxygenase activity GO:0050660F:flavin adenine dinucleotide binding GO:0050661F:NADP binding GO:0005789C:endoplasmic reticulum membrane |
EC:EC:1.6.3.1 EC:EC:1.14.13 |
| 5869 |
SRR924340_primary_scf7180002426827_1-1400
Len: 1,399 bp
E-val: 2.9E-42
|
XP_016111862.1PREDICTED: putative homeodomain transcription factor 2 isoform X1
|
GO:0005783C:endoplasmic reticulum GO:0016020C:membrane |
- |
| 5870 |
SRR924340_primary_scf7180002426828_89-1007
Len: 918 bp
E-val: 5.7E-31
|
XP_018967345.1PREDICTED: somatolactin-like
|
GO:0031667P:response to nutrient levels GO:0045927P:positive regulation of growth GO:0046427P:positive regulation of receptor signaling pathway via JAK-STAT GO:0048513P:animal organ development GO:0051877P:pigment granule aggregation in cell center GO:0060396P:growth hormone receptor signaling pathway GO:0005131F:growth hormone receptor binding GO:0070186F:growth hormone activity GO:0005615C:extracellular space |
- |
| 5871 |
SRR924340_primary_scf7180002426871_1-1405
Len: 1,404 bp
E-val: 2.9E-111
|
KTF85232.1hypothetical protein cypCar_00037943, partial
|
GO:0006897P:endocytosis GO:0071933F:Arp2/3 complex binding |
- |
| 5872 |
SRR924340_primary_scf7180002426890_1-1151
Len: 1,150 bp
E-val: 1.2E-46
|
XP_018981202.1PREDICTED: E-selectin-like isoform X1
|
GO:0007155P:cell adhesion GO:0046872F:metal ion binding GO:0005886C:plasma membrane GO:0016020C:membrane |
- |
| 5873 |
SRR924340_primary_scf7180002426910_1-1329
Len: 1,328 bp
E-val: 3.4E-40
|
CAG05112.1unnamed protein product, partial
|
GO:0110165C:cellular anatomical structure |
- |
| 5874 |
SRR924340_primary_scf7180002426919_1-1137
Len: 1,136 bp
E-val: 6.7E-21
|
XP_016298434.1PREDICTED: receptor-type tyrosine-protein phosphatase delta-like
protein-tyrosine-phosphatase
|
GO:0006338P:chromatin remodeling GO:0007156P:homophilic cell-cell adhesion GO:0007411P:axon guidance GO:0070593P:dendrite self-avoidance GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0098632F:cell-cell adhesion mediator activity GO:0140793F:histone H2AXY142 phosphatase activity GO:0005886C:plasma membrane GO:0030424C:axon |
EC:EC:3.1.3.48 |
| 5875 |
SRR924340_primary_scf7180002426949_324-1310
Len: 986 bp
E-val: 4.7E-180
|
XP_018976423.1PREDICTED: LOW QUALITY PROTEIN: histone-lysine N-methyltransferase SETD1B-like
[histone H3]-lysine(4) N-trimethyltransferase
|
GO:0006338P:chromatin remodeling GO:0032259P:methylation GO:0003723F:RNA binding GO:0140999F:histone H3K4 trimethyltransferase activity GO:0048188C:Set1C/COMPASS complex |
EC:EC:2.1.1.354 |