Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 6301 |
SRR924681_primary_scf7180003503653_1-3082
Len: 3,081 bp
E-val: 1.5E-115
|
XP_018929369.1PREDICTED: alpha-actinin-3 isoform X1
|
GO:0006508P:proteolysis GO:0030036P:actin cytoskeleton organization GO:0055001P:muscle cell development GO:0003779F:actin binding GO:0004252F:serine-type endopeptidase activity GO:0005509F:calcium ion binding GO:0051015F:actin filament binding GO:0005575C:cellular_component GO:0005886C:plasma membrane GO:0030018C:Z disc GO:0030054C:cell junction GO:0030864C:cortical actin cytoskeleton GO:0042995C:cell projection |
- |
| 6302 |
SRR924681_primary_scf7180003503726_1679-2183
Len: 504 bp
E-val: 1.1E-28
|
KTG43290.1hypothetical protein cypCar_00033223
myosin ATPase
|
GO:0007512P:adult heart development GO:0030049P:muscle filament sliding GO:0031444P:slow-twitch skeletal muscle fiber contraction GO:0045214P:sarcomere organization GO:0060048P:cardiac muscle contraction GO:0000146F:microfilament motor activity GO:0005524F:ATP binding GO:0051015F:actin filament binding GO:0005737C:cytoplasm GO:0016460C:myosin II complex GO:0032982C:myosin filament |
EC:EC:5.6.1.8 |
| 6303 |
SRR924681_primary_scf7180003503766_202-3151
Len: 2,949 bp
E-val: 0.0
|
XP_018958215.1PREDICTED: protein NLRC3-like
|
GO:0005886C:plasma membrane |
- |
| 6304 |
SRR924681_primary_scf7180003503773_230-2281
Len: 2,051 bp
E-val: 3.6E-41
|
XP_026130831.1cysteine-rich with EGF-like domain protein 1 isoform X1
Isomerases
|
EC:EC:5 | |
| 6305 |
SRR924681_primary_scf7180003503789_1-1644
Len: 1,643 bp
E-val: 2.3E-38
|
KTG02509.1hypothetical protein cypCar_00027309
|
GO:0006355P:regulation of DNA-templated transcription GO:0031507P:heterochromatin formation GO:0004386F:helicase activity GO:0005524F:ATP binding GO:0016787F:hydrolase activity GO:0042393F:histone binding GO:0005634C:nucleus GO:0005654C:nucleoplasm GO:0016514C:SWI/SNF complex |
- |
| 6306 |
SRR924681_primary_scf7180003503831_1-1087
Len: 1,086 bp
E-val: 5.7E-86
|
KTF73292.1hypothetical protein cypCar_00018593
Acting on the aldehyde or oxo group of donors
|
GO:0008152P:metabolic process GO:0016620F:oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor |
EC:EC:1.2.1 |
| 6307 |
SRR924681_primary_scf7180003503832_1-1697
Len: 1,696 bp
E-val: 5.6E-64
|
XP_018975728.1PREDICTED: sodium/calcium exchanger 1-like isoform X1
|
GO:0007154P:cell communication GO:0035725P:sodium ion transmembrane transport GO:0098703P:calcium ion import across plasma membrane GO:0005432F:calcium:sodium antiporter activity GO:0005516F:calmodulin binding GO:0046872F:metal ion binding GO:0012505C:endomembrane system GO:0030424C:axon GO:0042383C:sarcolemma GO:0098794C:postsynapse |
- |
| 6308 |
SRR924681_primary_scf7180003503905_138-2098
Len: 1,960 bp
E-val: 1.3E-56
|
XP_018925026.1PREDICTED: vitamin K-dependent gamma-carboxylase-like
|
GO:0042373P:vitamin K metabolic process GO:0008488F:gamma-glutamyl carboxylase activity GO:0016829F:lyase activity GO:0019842F:vitamin binding GO:0005783C:endoplasmic reticulum GO:0005789C:endoplasmic reticulum membrane GO:0012505C:endomembrane system GO:0016020C:membrane |
- |
| 6309 |
SRR924681_primary_scf7180003503910_186-1739
Len: 1,553 bp
E-val: 2.5E-42
|
ROL45852.1Plectin
|
GO:0031581P:hemidesmosome assembly GO:0042060P:wound healing GO:0045104P:intermediate filament cytoskeleton organization GO:0003779F:actin binding GO:0005200F:structural constituent of cytoskeleton GO:0008307F:structural constituent of muscle GO:0030506F:ankyrin binding GO:0045296F:cadherin binding GO:0005882C:intermediate filament GO:0005925C:focal adhesion GO:0030056C:hemidesmosome GO:0042383C:sarcolemma GO:0042995C:cell projection GO:0048471C:perinuclear region of cytoplasm |
- |
| 6310 |
SRR924681_primary_scf7180003503929_1-1613
Len: 1,612 bp
E-val: 1.6E-28
|
XP_026130380.1S-adenosylmethionine synthase
Transferases
|
GO:0008152P:metabolic process GO:0055013P:cardiac muscle cell development GO:0016740F:transferase activity |
EC:EC:2 |
| 6311 |
SRR924681_primary_scf7180003503936_206-2755
Len: 2,549 bp
E-val: 0.0
|
XP_018926524.1PREDICTED: LOW QUALITY PROTEIN: protocadherin-23-like
|
GO:0000902P:cell morphogenesis GO:0007043P:cell-cell junction assembly GO:0007156P:homophilic cell-cell adhesion GO:0016339P:calcium-dependent cell-cell adhesion GO:0016477P:cell migration GO:0034332P:adherens junction organization GO:0044331P:cell-cell adhesion mediated by cadherin GO:0060536P:cartilage morphogenesis GO:0005509F:calcium ion binding GO:0008013F:beta-catenin binding GO:0045296F:cadherin binding GO:0005912C:adherens junction GO:0016342C:catenin complex |
- |
| 6312 |
SRR924681_primary_scf7180003503944_1-1817
Len: 1,816 bp
E-val: 1.8E-140
|
XP_018974199.1PREDICTED: LOW QUALITY PROTEIN: thyroglobulin-like
|
GO:0007165P:signal transduction GO:0042446P:hormone biosynthetic process GO:2000609P:regulation of thyroid hormone generation GO:0005179F:hormone activity GO:0005615C:extracellular space |
- |
| 6313 |
SRR924681_primary_scf7180003503945_1-638
Len: 637 bp
E-val: 3.9E-119
|
RXN35649.1Retrovirus-related Pol polyprotein from transposon 412
RNA-directed DNA polymerase
|
GO:0006278P:RNA-templated DNA biosynthetic process GO:0015074P:DNA integration GO:0003676F:nucleic acid binding GO:0003964F:RNA-directed DNA polymerase activity GO:0004519F:endonuclease activity |
EC:EC:2.7.7.49 |
| 6314 |
SRR924681_primary_scf7180003503967_448-3261
Len: 2,813 bp
E-val: 3.2E-101
|
XP_018921654.1PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HUWE1-like
Acyltransferases
|
GO:0000209P:protein polyubiquitination GO:0006284P:base-excision repair GO:0006511P:ubiquitin-dependent protein catabolic process GO:0007030P:Golgi organization GO:0061025P:membrane fusion GO:0008270F:zinc ion binding GO:0061630F:ubiquitin protein ligase activity GO:0000139C:Golgi membrane GO:0005634C:nucleus |
EC:EC:2.3.2 |
| 6315 |
SRR924681_primary_scf7180003503986_1-1826
Len: 1,825 bp
E-val: 2.7E-64
|
KTF95203.1hypothetical protein cypCar_00038272, partial
|
GO:0009653P:anatomical structure morphogenesis GO:0045216P:cell-cell junction organization GO:0098609P:cell-cell adhesion GO:0005515F:protein binding GO:0005886C:plasma membrane |
- |
| 6316 |
SRR924681_primary_scf7180003503987_1-1252
Len: 1,251 bp
E-val: 2.1E-28
|
XP_026084261.1probable nuclear hormone receptor HR38 isoform X1
|
GO:0001780P:neutrophil homeostasis GO:0006357P:regulation of transcription by RNA polymerase II GO:0030522P:intracellular receptor signaling pathway GO:0071376P:cellular response to corticotropin-releasing hormone stimulus GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0004879F:nuclear receptor activity GO:0008270F:zinc ion binding GO:0035259F:nuclear glucocorticoid receptor binding GO:0005634C:nucleus GO:0005667C:transcription regulator complex GO:0005737C:cytoplasm |
- |
| 6317 |
SRR924681_primary_scf7180003503994_92-2130
Len: 2,038 bp
E-val: 6.0E-214
|
KTG36348.1hypothetical protein cypCar_00020401, partial
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
- |
| 6318 |
SRR924681_primary_scf7180003503996_1-1263
Len: 1,262 bp
E-val: 1.8E-38
|
XP_016134150.1PREDICTED: methionine adenosyltransferase 2 subunit beta isoform X1
|
GO:0006556P:S-adenosylmethionine biosynthetic process GO:0006730P:one-carbon metabolic process GO:0009058P:biosynthetic process GO:0048270F:methionine adenosyltransferase regulator activity GO:0048269C:methionine adenosyltransferase complex |
- |
| 6319 |
SRR924681_primary_scf7180003504053_1-607
Len: 606 bp
E-val: 2.9E-23
|
XP_026023904.1inositol 1,4,5-trisphosphate receptor type 1 isoform X4
|
GO:0019722P:calcium-mediated signaling GO:0051209P:release of sequestered calcium ion into cytosol GO:0005220F:inositol 1,4,5-trisphosphate-gated calcium channel activity GO:0070679F:inositol 1,4,5 trisphosphate binding GO:0005789C:endoplasmic reticulum membrane GO:0030658C:transport vesicle membrane |
- |
| 6320 |
SRR924681_primary_scf7180003504054_1-2089
Len: 2,088 bp
E-val: 4.1E-32
|
ROL44844.1Anoctamin-1
|
GO:1902476P:chloride transmembrane transport GO:0005229F:intracellularly calcium-gated chloride channel activity GO:0046983F:protein dimerization activity GO:0005886C:plasma membrane GO:0016020C:membrane |
- |
| 6321 |
SRR924681_primary_scf7180003504081_1-1173
Len: 1,172 bp
E-val: 3.1E-13
|
XP_016308619.1PREDICTED: radixin-like
|
GO:0009887P:animal organ morphogenesis GO:0030182P:neuron differentiation GO:0003779F:actin binding GO:0005856C:cytoskeleton GO:0005886C:plasma membrane GO:0005902C:microvillus GO:0005912C:adherens junction |
- |
| 6322 |
SRR924681_primary_scf7180003504083_1-2437
Len: 2,436 bp
E-val: 2.4E-28
|
XP_018922309.1PREDICTED: RNA-binding motif protein, X chromosome isoform X1
|
GO:0010557P:positive regulation of macromolecule biosynthetic process GO:0048024P:regulation of mRNA splicing, via spliceosome GO:0051254P:positive regulation of RNA metabolic process GO:0003723F:RNA binding GO:0005681C:spliceosomal complex |
- |
| 6323 |
SRR924681_primary_scf7180003504087_904-1803
Len: 899 bp
E-val: 8.6E-165
|
KTF93149.1hypothetical protein cypCar_00045685
|
GO:0006955P:immune response GO:0007204P:positive regulation of cytosolic calcium ion concentration GO:0019722P:calcium-mediated signaling GO:0060326P:cell chemotaxis GO:0070098P:chemokine-mediated signaling pathway GO:0016493F:C-C chemokine receptor activity GO:0019957F:C-C chemokine binding GO:0005769C:early endosome GO:0009897C:external side of plasma membrane |
- |
| 6324 |
SRR924681_primary_scf7180003504102_1-1142
Len: 1,141 bp
E-val: 4.0E-50
|
XP_026083263.1ras-related GTP-binding protein C
|
GO:0009267P:cellular response to starvation GO:0010507P:negative regulation of autophagy GO:0032008P:positive regulation of TOR signaling GO:0071230P:cellular response to amino acid stimulus GO:1904263P:positive regulation of TORC1 signaling GO:0003924F:GTPase activity GO:0005525F:GTP binding GO:0016787F:hydrolase activity GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005764C:lysosome GO:0012505C:endomembrane system GO:1990131C:Gtr1-Gtr2 GTPase complex |
- |
| 6325 |
SRR924681_primary_scf7180003504112_1-1399
Len: 1,398 bp
E-val: 6.6E-63
|
ROL51285.1Cytoplasmic dynein 1 heavy chain 1
Isomerases altering macromolecular conformation; nucleoside-triphosphate phosphatase
|
GO:0007018P:microtubule-based movement GO:0005524F:ATP binding GO:0008569F:minus-end-directed microtubule motor activity GO:0016887F:ATP hydrolysis activity GO:0045505F:dynein intermediate chain binding GO:0051959F:dynein light intermediate chain binding GO:0005858C:axonemal dynein complex GO:0005874C:microtubule |
EC:EC:5.6.1 EC:EC:3.6.1.15 |