Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 6851 |
SRR924681_primary_scf7180003537516_234-1663
Len: 1,429 bp
E-val: 4.4E-46
|
KTF72791.1hypothetical protein cypCar_00048258, partial
|
GO:0015804P:neutral amino acid transport GO:0015813P:L-glutamate transmembrane transport GO:0005313F:L-glutamate transmembrane transporter activity GO:0015175F:neutral L-amino acid transmembrane transporter activity GO:0015501F:glutamate:sodium symporter activity GO:0005886C:plasma membrane |
- |
| 6852 |
SRR924681_primary_scf7180003537542_1-2391
Len: 2,390 bp
E-val: 2.7E-16
|
KTF84262.1hypothetical protein cypCar_00015875, partial
propionyl-CoA carboxylase
|
GO:0001841P:neural tube formation GO:0006629P:lipid metabolic process GO:0008589P:regulation of smoothened signaling pathway GO:0009953P:dorsal/ventral pattern formation GO:0014032P:neural crest cell development GO:0021536P:diencephalon development GO:0021846P:cell proliferation in forebrain GO:0030902P:hindbrain development GO:0033278P:cell proliferation in midbrain GO:0042127P:regulation of cell population proliferation GO:0045892P:negative regulation of DNA-templated transcription GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048385P:regulation of retinoic acid receptor signaling pathway GO:0048703P:embryonic viscerocranium morphogenesis GO:0060059P:embryonic retina morphogenesis in camera-type eye GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0004658F:propionyl-CoA carboxylase activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0005739C:mitochondrion |
EC:EC:6.4.1.3 |
| 6853 |
SRR924681_primary_scf7180003537549_1-892
Len: 891 bp
E-val: 1.9E-18
|
XP_016110255.1PREDICTED: cytosolic purine 5'-nucleotidase-like
|
GO:0009117P:nucleotide metabolic process GO:0046037P:GMP metabolic process GO:0005524F:ATP binding GO:0008253F:5'-nucleotidase activity GO:0016740F:transferase activity GO:0016787F:hydrolase activity GO:0046872F:metal ion binding GO:0005737C:cytoplasm GO:0005829C:cytosol |
- |
| 6854 |
SRR924681_primary_scf7180003537550_160-2828
Len: 2,668 bp
E-val: 4.0E-48
|
KTF92774.1hypothetical protein cypCar_00003724
Acyltransferases
|
GO:0004842F:ubiquitin-protein transferase activity |
EC:EC:2.3.2 |
| 6855 |
SRR924681_primary_scf7180003537572_1-794
Len: 793 bp
E-val: 9.3E-62
|
XP_018964138.1PREDICTED: matrix metalloproteinase-19-like
Acting on peptide bonds (peptidases); Glycosyltransferases
|
GO:0006047P:UDP-N-acetylglucosamine metabolic process GO:0006508P:proteolysis GO:0019276P:UDP-N-acetylgalactosamine metabolic process GO:0030198P:extracellular matrix organization GO:0030574P:collagen catabolic process GO:0004222F:metalloendopeptidase activity GO:0008270F:zinc ion binding GO:0008376F:acetylgalactosaminyltransferase activity GO:0005615C:extracellular space GO:0031012C:extracellular matrix |
EC:EC:3.4.24 EC:EC:2.4.1 |
| 6856 |
SRR924681_primary_scf7180003537600_1-1778
Len: 1,777 bp
E-val: 1.6E-242
|
KTG38874.1hypothetical protein cypCar_00003914
|
GO:0045892P:negative regulation of DNA-templated transcription GO:0045893P:positive regulation of DNA-templated transcription GO:0003676F:nucleic acid binding GO:0008270F:zinc ion binding GO:0005654C:nucleoplasm |
- |
| 6857 |
SRR924681_primary_scf7180003537602_1-758
Len: 757 bp
E-val: 3.0E-17
|
XP_016379155.1PREDICTED: LOW QUALITY PROTEIN: probable arginine--tRNA ligase, mitochondrial
arginine--tRNA ligase
|
GO:0006420P:arginyl-tRNA aminoacylation GO:0032543P:mitochondrial translation GO:0048854P:brain morphogenesis GO:0004814F:arginine-tRNA ligase activity GO:0005524F:ATP binding GO:0005739C:mitochondrion |
EC:EC:6.1.1.19 |
| 6858 |
SRR924681_primary_scf7180003537624_1-1533
Len: 1,532 bp
E-val: 1.2E-206
|
XP_018927572.1PREDICTED: LOW QUALITY PROTEIN: histone-lysine N-methyltransferase SETD1A-like
Acting on peptide bonds (peptidases); histone acetyltransferase; Transferring one-carbon groups
|
GO:0006338P:chromatin remodeling GO:0006355P:regulation of DNA-templated transcription GO:0006508P:proteolysis GO:0032259P:methylation GO:0003723F:RNA binding GO:0004252F:serine-type endopeptidase activity GO:0008270F:zinc ion binding GO:0032931F:histone H3K56 acetyltransferase activity GO:0036408F:histone H3K14 acetyltransferase activity GO:0042800F:histone H3K4 methyltransferase activity GO:0043992F:histone H3K9 acetyltransferase activity GO:0043993F:histone H3K18 acetyltransferase activity GO:0043994F:histone H3K23 acetyltransferase activity GO:0043995F:histone H4K5 acetyltransferase activity GO:0043996F:histone H4K8 acetyltransferase activity GO:0043997F:histone H4K12 acetyltransferase activity GO:0043999F:histone H2AK5 acetyltransferase activity GO:0044012F:histone H2AK9 acetyltransferase activity GO:0044014F:histone H2BK5 acetyltransferase activity GO:0044015F:histone H2BK12 acetyltransferase activity GO:0044016F:histone H3K4 acetyltransferase activity GO:0044017F:histone H3K27 acetyltransferase activity GO:0044018F:histone H3K36 acetyltransferase activity GO:0046972F:histone H4K16 acetyltransferase activity GO:0140908F:histone H3K122 acetyltransferase activity GO:0000775C:chromosome, centromeric region GO:0048188C:Set1C/COMPASS complex |
EC:EC:3.4.21 EC:EC:2.3.1.48 EC:EC:2.1.1 |
| 6859 |
SRR924681_primary_scf7180003537643_195-1400
Len: 1,205 bp
E-val: 7.2E-82
|
XP_016362652.1PREDICTED: TOX high mobility group box family member 4-A-like
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0031490F:chromatin DNA binding GO:0005634C:nucleus |
- |
| 6860 |
SRR924681_primary_scf7180003537671_1-1756
Len: 1,755 bp
E-val: 1.7E-95
|
KTF98743.1hypothetical protein cypCar_00014734
|
GO:0042472P:inner ear morphogenesis GO:0048884P:neuromast development GO:0050910P:detection of mechanical stimulus involved in sensory perception of sound |
- |
| 6861 |
SRR924681_primary_scf7180003537717_1-928
Len: 927 bp
E-val: 5.8E-23
|
ROL47161.1Annexin A5
|
GO:0001786F:phosphatidylserine binding GO:0005544F:calcium-dependent phospholipid binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005886C:plasma membrane GO:0012506C:vesicle membrane |
- |
| 6862 |
SRR924681_primary_scf7180003537738_1-1534
Len: 1,533 bp
E-val: 2.5E-196
|
XP_016370637.1PREDICTED: SH3 and multiple ankyrin repeat domains protein 3-like
|
GO:0036269P:swimming behavior GO:0048854P:brain morphogenesis GO:0120054P:intestinal motility GO:0030160F:synaptic receptor adaptor activity GO:0035255F:ionotropic glutamate receptor binding GO:0014069C:postsynaptic density GO:0043197C:dendritic spine GO:0045211C:postsynaptic membrane |
- |
| 6863 |
SRR924681_primary_scf7180003537770_210-1418
Len: 1,208 bp
E-val: 4.5E-217
|
KTG47854.1hypothetical protein cypCar_00009114
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0034599P:cellular response to oxidative stress GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
- |
| 6864 |
SRR924681_primary_scf7180003537771_711-1499
Len: 788 bp
E-val: 1.3E-26
|
KTG41300.1hypothetical protein cypCar_00006464
protein S-acyltransferase
|
GO:0062208P:positive regulation of pattern recognition receptor signaling pathway GO:0019706F:protein-cysteine S-palmitoyltransferase activity GO:0005886C:plasma membrane GO:0012505C:endomembrane system |
EC:EC:2.3.1.225 |
| 6865 |
SRR924681_primary_scf7180003537777_1-1402
Len: 1,401 bp
E-val: 6.7E-47
|
XP_026075451.1exportin-7 isoform X1
|
GO:0006611P:protein export from nucleus GO:0006886P:intracellular protein transport GO:0015031P:protein transport GO:0051169P:nuclear transport GO:0005049F:nuclear export signal receptor activity GO:0031267F:small GTPase binding GO:0005634C:nucleus GO:0005643C:nuclear pore GO:0005737C:cytoplasm |
- |
| 6866 |
SRR924681_primary_scf7180003537803_1-1577
Len: 1,576 bp
E-val: 7.5E-63
|
XP_016409019.1PREDICTED: serine/threonine-protein kinase TAO3-like
|
GO:0046872F:metal ion binding |
- |
| 6867 |
SRR924681_primary_scf7180003537834_1-1744
Len: 1,743 bp
E-val: 4.9E-23
|
KTG32094.1hypothetical protein cypCar_00010887
[heparan sulfate]-glucosamine N-sulfotransferase; Hydrolases
|
GO:0015012P:heparan sulfate proteoglycan biosynthetic process GO:0030210P:heparin proteoglycan biosynthetic process GO:0015016F:heparan sulfate N-sulfotransferase activity GO:0016787F:hydrolase activity GO:0019213F:deacetylase activity GO:0000139C:Golgi membrane |
EC:EC:2.8.2.8 EC:EC:3 |
| 6868 |
SRR924681_primary_scf7180003537849_1-1761
Len: 1,760 bp
E-val: 3.2E-46
|
PWA18471.1hypothetical protein CCH79_00009856
|
GO:0031053P:primary miRNA processing GO:0003723F:RNA binding GO:0003725F:double-stranded RNA binding GO:0020037F:heme binding GO:0042802F:identical protein binding GO:0070878F:primary miRNA binding GO:0070877C:microprocessor complex |
- |
| 6869 |
SRR924681_primary_scf7180003537856_1-1316
Len: 1,315 bp
E-val: 3.2E-27
|
XP_026139703.1protein Wnt-4-like isoform X1
|
GO:0009987P:cellular process GO:0032502P:developmental process GO:0005102F:signaling receptor binding GO:0110165C:cellular anatomical structure |
- |
| 6870 |
SRR924681_primary_scf7180003537886_1-2044
Len: 2,043 bp
E-val: 2.5E-18
|
XP_026105668.1squamous cell carcinoma antigen recognized by T-cells 3
|
GO:0000245P:spliceosomal complex assembly GO:0000387P:spliceosomal snRNP assembly GO:0006334P:nucleosome assembly GO:0030098P:lymphocyte differentiation GO:0031017P:exocrine pancreas development GO:0048538P:thymus development GO:0061484P:hematopoietic stem cell homeostasis GO:0140673P:transcription elongation-coupled chromatin remodeling GO:1902033P:regulation of hematopoietic stem cell proliferation GO:1902253P:regulation of intrinsic apoptotic signaling pathway by p53 class mediator GO:0017070F:U6 snRNA binding GO:0042393F:histone binding GO:0005691C:U6atac snRNP GO:0005737C:cytoplasm GO:0015030C:Cajal body GO:0016607C:nuclear speck GO:0061574C:ASAP complex GO:0071001C:U4/U6 snRNP |
- |
| 6871 |
SRR924681_primary_scf7180003537888_383-1525
Len: 1,142 bp
E-val: 8.2E-27
|
XP_018933587.1PREDICTED: protein Mdm4 isoform X2
|
GO:0016567P:protein ubiquitination GO:0043066P:negative regulation of apoptotic process GO:0051726P:regulation of cell cycle GO:0004842F:ubiquitin-protein transferase activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
- |
| 6872 |
SRR924681_primary_scf7180003537892_1-1639
Len: 1,638 bp
E-val: 5.7E-106
|
KTG38635.1hypothetical protein cypCar_00005105
|
GO:0000184P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0000290P:deadenylation-dependent decapping of nuclear-transcribed mRNA GO:0031087P:deadenylation-independent decapping of nuclear-transcribed mRNA GO:0070588P:calcium ion transmembrane transport GO:0003729F:mRNA binding GO:0005245F:voltage-gated calcium channel activity GO:0008047F:enzyme activator activity GO:0000932C:P-body GO:0005891C:voltage-gated calcium channel complex |
- |
| 6873 |
SRR924681_primary_scf7180003537923_1-1808
Len: 1,807 bp
E-val: 4.7E-69
|
XP_026067620.1LIM homeobox transcription factor 1-alpha-like isoform X1
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0030182P:neuron differentiation GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0046872F:metal ion binding GO:0005634C:nucleus |
- |
| 6874 |
SRR924681_primary_scf7180003537995_625-1495
Len: 870 bp
E-val: 2.0E-57
|
KTF89189.1hypothetical protein cypCar_00032440
|
GO:0000045P:autophagosome assembly GO:0000422P:autophagy of mitochondrion GO:0015031P:protein transport GO:0034517P:ribophagy GO:0034727P:piecemeal microautophagy of the nucleus GO:0061709P:reticulophagy GO:0061723P:glycophagy GO:0019901F:protein kinase binding GO:0060090F:molecular adaptor activity GO:0034045C:phagophore assembly site membrane GO:1990316C:Atg1/ULK1 kinase complex |
- |
| 6875 |
SRR924681_primary_scf7180003538025_1329-2500
Len: 1,171 bp
E-val: 4.7E-46
|
XP_009294058.1protein NLRC3
|
GO:0008270F:zinc ion binding GO:0005737C:cytoplasm |
- |