Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 7851 |
SRR924681_primary_scf7180003645721_1-1042
Len: 1,041 bp
E-val: 8.9E-89
|
RXN26901.1low-density lipo receptor-related 1-like protein
|
GO:0006898P:receptor-mediated endocytosis GO:0006909P:phagocytosis GO:0150093P:amyloid-beta clearance by transcytosis GO:0150094P:amyloid-beta clearance by cellular catabolic process GO:1901342P:regulation of vasculature development GO:0034185F:apolipoprotein binding GO:0038024F:cargo receptor activity GO:0005886C:plasma membrane |
- |
| 7852 |
SRR924681_primary_scf7180003647900_1-586
Len: 585 bp
E-val: 2.3E-78
|
XP_018975098.1PREDICTED: tumor necrosis factor-like
|
GO:0001889P:liver development GO:0006955P:immune response GO:0042742P:defense response to bacterium GO:0043123P:positive regulation of canonical NF-kappaB signal transduction GO:2001238P:positive regulation of extrinsic apoptotic signaling pathway GO:0005125F:cytokine activity GO:0005164F:tumor necrosis factor receptor binding GO:0005615C:extracellular space GO:0016020C:membrane |
- |
| 7853 |
SRR924681_primary_scf7180003651355_1-455
Len: 454 bp
E-val:
|
-
|
-
|
- |
| 7854 |
SRR924681_primary_scf7180003652204_598-825
Len: 227 bp
E-val: 1.5E-28
|
XP_018923995.1PREDICTED: calcium/calmodulin-dependent protein kinase type 1D-like
|
GO:0007411P:axon guidance GO:0038007P:netrin-activated signaling pathway GO:0005042F:netrin receptor activity GO:0005886C:plasma membrane |
- |
| 7855 |
SRR924681_primary_scf7180003653940_1-815
Len: 814 bp
E-val: 1.3E-26
|
RXN04749.1pituitary homeobox 1 isoform X2
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009653P:anatomical structure morphogenesis GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
- |
| 7856 |
SRR924681_primary_scf7180003655104_1-642
Len: 641 bp
E-val: 3.7E-21
|
XP_018929231.1PREDICTED: prostacyclin synthase-like
prostaglandin-I synthase; hydroperoxy icosatetraenoate dehydratase; Acting on paired donors, with incorporation or reduction of molecular oxygen. The oxygen incorporated need not be derived from O2
|
GO:0001516P:prostaglandin biosynthetic process GO:0004497F:monooxygenase activity GO:0005506F:iron ion binding GO:0008116F:prostaglandin-I synthase activity GO:0016705F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0020037F:heme binding GO:0106256F:hydroperoxy icosatetraenoate dehydratase activity GO:0005789C:endoplasmic reticulum membrane |
EC:EC:5.3.99.4 EC:EC:4.2.1.152 EC:EC:1.14 |
| 7857 |
SRR924681_primary_scf7180003697789_404-955
Len: 551 bp
E-val: 1.8E-40
|
XP_026127016.1transmembrane anterior posterior transformation protein 1 homolog isoform X1
|
GO:0001503P:ossification GO:0002089P:lens morphogenesis in camera-type eye GO:0010842P:retina layer formation GO:0014032P:neural crest cell development GO:0045724P:positive regulation of cilium assembly GO:0048066P:developmental pigmentation GO:0061036P:positive regulation of cartilage development GO:1903012P:positive regulation of bone development GO:1904888P:cranial skeletal system development GO:0005789C:endoplasmic reticulum membrane GO:0036064C:ciliary basal body |
- |
| 7858 |
SRR924681_primary_scf7180003715846_1-1060
Len: 1,059 bp
E-val: 5.4E-49
|
XP_018976374.1PREDICTED: kinase D-interacting substrate of 220 kDa-like
|
GO:0038180P:nerve growth factor signaling pathway GO:0016301F:kinase activity GO:0019887F:protein kinase regulator activity GO:0030165F:PDZ domain binding GO:0016020C:membrane |
- |
| 7859 |
SRR924681_primary_scf7180003716610_1-2182
Len: 2,181 bp
E-val: 8.5E-49
|
KTG46512.1hypothetical protein cypCar_00000814
|
GO:0001579P:medium-chain fatty acid transport GO:0001676P:long-chain fatty acid metabolic process GO:0006629P:lipid metabolic process GO:0006631P:fatty acid metabolic process GO:0007166P:cell surface receptor signaling pathway GO:0007186P:G protein-coupled receptor signaling pathway GO:0044539P:long-chain fatty acid import into cell GO:0004930F:G protein-coupled receptor activity GO:0005324F:long-chain fatty acid transmembrane transporter activity GO:0005509F:calcium ion binding GO:0016874F:ligase activity GO:0090434F:oleoyl-CoA ligase activity GO:0005743C:mitochondrial inner membrane GO:0005789C:endoplasmic reticulum membrane GO:0005886C:plasma membrane GO:0016020C:membrane |
- |
| 7860 |
SRR924681_primary_scf7180003716611_1-2392
Len: 2,391 bp
E-val: 1.6E-24
|
KTG43891.1hypothetical protein cypCar_00023751
|
GO:0030071P:regulation of mitotic metaphase/anaphase transition GO:0031145P:anaphase-promoting complex-dependent catabolic process GO:0051301P:cell division GO:0070979P:protein K11-linked ubiquitination GO:0005680C:anaphase-promoting complex GO:0034399C:nuclear periphery |
- |
| 7861 |
SRR924681_primary_scf7180003716722_1-1603
Len: 1,602 bp
E-val: 5.7E-18
|
ROI27773.1putative ATP-dependent RNA helicase DDX31
RNA helicase; Isomerases altering macromolecular conformation; nucleoside-triphosphate phosphatase
|
GO:0042254P:ribosome biogenesis GO:0003723F:RNA binding GO:0003724F:RNA helicase activity GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0005634C:nucleus GO:0016020C:membrane |
EC:EC:3.6.4.13 EC:EC:5.6.2 EC:EC:3.6.1.15 |
| 7862 |
SRR924681_primary_scf7180003716729_1-670
Len: 669 bp
E-val: 9.1E-10
|
XP_023568388.1ubiquitin-conjugating enzyme E2 Q2 isoform X2
|
-
|
- |
| 7863 |
SRR924681_primary_scf7180003716743_1323-2103
Len: 780 bp
E-val: 1.5E-11
|
KTF94911.1hypothetical protein cypCar_00033918
|
GO:0006446P:regulation of translational initiation GO:0140469P:GCN2-mediated signaling GO:0005737C:cytoplasm |
- |
| 7864 |
SRR924681_primary_scf7180003716753_1498-2815
Len: 1,317 bp
E-val: 3.3E-120
|
XP_026066426.1globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like
Glycosyltransferases
|
GO:0005975P:carbohydrate metabolic process GO:0016758F:hexosyltransferase activity GO:0046872F:metal ion binding GO:0005794C:Golgi apparatus GO:0016020C:membrane GO:0031982C:vesicle |
EC:EC:2.4.1 |
| 7865 |
SRR924681_primary_scf7180003716780_546-1689
Len: 1,143 bp
E-val: 6.1E-30
|
KTF85485.1hypothetical protein cypCar_00007688
|
GO:0006508P:proteolysis GO:0051603P:proteolysis involved in protein catabolic process GO:0004197F:cysteine-type endopeptidase activity GO:0004869F:cysteine-type endopeptidase inhibitor activity GO:0008234F:cysteine-type peptidase activity GO:0005615C:extracellular space GO:0005764C:lysosome |
- |
| 7866 |
SRR924681_primary_scf7180003716789_843-1898
Len: 1,055 bp
E-val: 7.0E-142
|
KTF86056.1hypothetical protein cypCar_00045051, partial
|
GO:0033365P:protein localization to organelle GO:0048260P:positive regulation of receptor-mediated endocytosis GO:0070507P:regulation of microtubule cytoskeleton organization GO:0072393P:microtubule anchoring at microtubule organizing center GO:0008093F:cytoskeletal anchor activity GO:0034452F:dynactin binding GO:0045505F:dynein intermediate chain binding GO:0070840F:dynein complex binding GO:0005794C:Golgi apparatus GO:0005829C:cytosol |
- |
| 7867 |
SRR924681_primary_scf7180003716792_1-1229
Len: 1,228 bp
E-val: 1.2E-31
|
KTG04942.1hypothetical protein cypCar_00002471
|
GO:0006869P:lipid transport GO:0015485F:cholesterol binding GO:0005829C:cytosol GO:0005886C:plasma membrane GO:0097038C:perinuclear endoplasmic reticulum |
- |
| 7868 |
SRR924681_primary_scf7180003716793_408-1675
Len: 1,267 bp
E-val: 6.3E-28
|
KTG04370.1hypothetical protein cypCar_00027204, partial
|
GO:0006955P:immune response GO:0043123P:positive regulation of canonical NF-kappaB signal transduction GO:2001238P:positive regulation of extrinsic apoptotic signaling pathway GO:0005125F:cytokine activity GO:0005164F:tumor necrosis factor receptor binding GO:0046872F:metal ion binding GO:0005615C:extracellular space GO:0005886C:plasma membrane |
- |
| 7869 |
SRR924681_primary_scf7180003716797_1118-1840
Len: 722 bp
E-val: 6.4E-102
|
XP_016143110.1PREDICTED: MKL/myocardin-like protein 2 isoform X1
|
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0051145P:smooth muscle cell differentiation GO:0003713F:transcription coactivator activity GO:0005634C:nucleus |
- |
| 7870 |
SRR924681_primary_scf7180003716833_1-643
Len: 642 bp
E-val: 2.8E-16
|
KTF89040.1hypothetical protein cypCar_00007938, partial
|
GO:0005096F:GTPase activator activity GO:0031410C:cytoplasmic vesicle |
- |
| 7871 |
SRR924681_primary_scf7180003716870_1353-1604
Len: 251 bp
E-val: 1.5E-37
|
KTG35948.1hypothetical protein cypCar_00038508
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0015031P:protein transport GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:1901981F:phosphatidylinositol phosphate binding GO:0005634C:nucleus GO:0031901C:early endosome membrane |
- |
| 7872 |
SRR924681_primary_scf7180003716893_1-1697
Len: 1,696 bp
E-val: 2.0E-21
|
AAR04059.1sulfatase FP2a
N-acetylglucosamine-6-sulfatase
|
GO:0002063P:chondrocyte development GO:0010575P:positive regulation of vascular endothelial growth factor production GO:0010669P:epithelial structure maintenance GO:0014846P:esophagus smooth muscle contraction GO:0030177P:positive regulation of Wnt signaling pathway GO:0030201P:heparan sulfate proteoglycan metabolic process GO:0032836P:glomerular basement membrane development GO:0035860P:glial cell-derived neurotrophic factor receptor signaling pathway GO:0040037P:negative regulation of fibroblast growth factor receptor signaling pathway GO:0048706P:embryonic skeletal system development GO:0060348P:bone development GO:0060384P:innervation GO:0004065F:arylsulfatase activity GO:0005509F:calcium ion binding GO:0005539F:glycosaminoglycan binding GO:0008449F:N-acetylglucosamine-6-sulfatase activity GO:0005615C:extracellular space GO:0005783C:endoplasmic reticulum GO:0005795C:Golgi stack GO:0005886C:plasma membrane GO:0009986C:cell surface |
EC:EC:3.1.6.14 |
| 7873 |
SRR924681_primary_scf7180003716900_324-1307
Len: 983 bp
E-val: 2.4E-168
|
KTF84153.1hypothetical protein cypCar_00031666, partial
Transferring phosphorus-containing groups
|
GO:0006338P:chromatin remodeling GO:0051262P:protein tetramerization GO:0070588P:calcium ion transmembrane transport GO:0004676F:3-phosphoinositide-dependent protein kinase activity GO:0004677F:DNA-dependent protein kinase activity GO:0004679F:AMP-activated protein kinase activity GO:0004694F:eukaryotic translation initiation factor 2alpha kinase activity GO:0004711F:ribosomal protein S6 kinase activity GO:0005262F:calcium channel activity GO:0005524F:ATP binding GO:0035175F:histone H3S10 kinase activity GO:0035402F:histone H3T11 kinase activity GO:0035403F:histone H3T6 kinase activity GO:0035979F:histone H2AXS139 kinase activity GO:0044022F:histone H3S28 kinase activity GO:0044023F:histone H4S1 kinase activity GO:0044024F:histone H2AS1 kinase activity GO:0044025F:histone H2BS14 kinase activity GO:0046872F:metal ion binding GO:0072354F:histone H3T3 kinase activity GO:0072518F:Rho-dependent protein serine/threonine kinase activity GO:0140823F:histone H2BS36 kinase activity GO:0140855F:histone H3S57 kinase activity GO:0140857F:histone H3T45 kinase activity GO:1990244F:histone H2AT120 kinase activity GO:0005634C:nucleus GO:0016324C:apical plasma membrane |
EC:EC:2.7.11 |
| 7874 |
SRR924681_primary_scf7180003716971_1041-1997
Len: 956 bp
E-val: 5.1E-30
|
XP_016143359.1PREDICTED: LOW QUALITY PROTEIN: hydrocephalus-inducing protein homolog
|
- | |
| 7875 |
SRR924681_primary_scf7180003716984_1-1609
Len: 1,608 bp
E-val: 1.1E-29
|
XP_021472887.1ryanodine receptor 1-like
|
- |