Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 9501 |
SRR941867_primary_scf7180002041413_1-3746
Len: 3,745 bp
E-val: 0.0
|
XP_016420131.1PREDICTED: uncharacterized protein LOC107749476
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003677F:DNA binding GO:0008270F:zinc ion binding GO:0005634C:nucleus |
- |
| 9502 |
SRR941867_primary_scf7180002041428_1-5258
Len: 5,257 bp
E-val: 2.7E-117
|
KTF82936.1hypothetical protein cypCar_00014114
|
GO:0000209P:protein polyubiquitination GO:0006281P:DNA repair GO:0006511P:ubiquitin-dependent protein catabolic process GO:0006974P:DNA damage response GO:0016567P:protein ubiquitination GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0008270F:zinc ion binding GO:0016740F:transferase activity GO:0016874F:ligase activity GO:0061630F:ubiquitin protein ligase activity GO:0005634C:nucleus GO:0005654C:nucleoplasm GO:0016607C:nuclear speck |
- |
| 9503 |
SRR941867_primary_scf7180002041449_1457-2287
Len: 830 bp
E-val: 4.9E-130
|
XP_018934899.1PREDICTED: probable voltage-dependent N-type calcium channel subunit alpha-1B
|
GO:0007268P:chemical synaptic transmission GO:0098703P:calcium ion import across plasma membrane GO:0005509F:calcium ion binding GO:0008331F:high voltage-gated calcium channel activity GO:0005891C:voltage-gated calcium channel complex GO:0043025C:neuronal cell body GO:0045202C:synapse |
- |
| 9504 |
SRR941867_primary_scf7180002041454_1903-2928
Len: 1,025 bp
E-val: 6.6E-28
|
XP_023204989.1probable phospholipid-transporting ATPase IM isoform X5
P-type phospholipid transporter; nucleoside-triphosphate phosphatase
|
GO:0007030P:Golgi organization GO:0045332P:phospholipid translocation GO:0000287F:magnesium ion binding GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0140326F:ATPase-coupled intramembrane lipid transporter activity GO:0005802C:trans-Golgi network GO:0005886C:plasma membrane |
EC:EC:7.6.2.1 EC:EC:3.6.1.15 |
| 9505 |
SRR941867_primary_scf7180002041463_1-2445
Len: 2,444 bp
E-val: 8.4E-255
|
XP_018976896.1PREDICTED: aftiphilin-like
Catalysing the translocation of inorganic cations; nucleoside-triphosphate phosphatase; Acyltransferases
|
GO:0003341P:cilium movement GO:0008592P:regulation of Toll signaling pathway GO:0046907P:intracellular transport GO:0055085P:transmembrane transport GO:0070936P:protein K48-linked ubiquitination GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0030276F:clathrin binding GO:0061630F:ubiquitin protein ligase activity GO:0140359F:ABC-type transporter activity GO:0030121C:AP-1 adaptor complex GO:0032588C:trans-Golgi network membrane |
EC:EC:7.2.2 EC:EC:3.6.1.15 EC:EC:2.3.2 |
| 9506 |
SRR941867_primary_scf7180002041472_704-4805
Len: 4,101 bp
E-val: 2.2E-34
|
XP_016122315.1PREDICTED: myosin-9-like
myosin ATPase
|
GO:0003094P:glomerular filtration GO:0032836P:glomerular basement membrane development GO:0072015P:podocyte development GO:0072104P:glomerular capillary formation GO:0000146F:microfilament motor activity GO:0051015F:actin filament binding GO:0016460C:myosin II complex GO:0031410C:cytoplasmic vesicle GO:0032982C:myosin filament |
EC:EC:5.6.1.8 |
| 9507 |
SRR941867_primary_scf7180002041481_1311-1604
Len: 293 bp
E-val: 1.1E-9
|
XP_016422019.1PREDICTED: uncharacterized protein LOC107750954
|
GO:0030833P:regulation of actin filament polymerization GO:0045773P:positive regulation of axon extension GO:0048812P:neuron projection morphogenesis GO:0061003P:positive regulation of dendritic spine morphogenesis GO:0098974P:postsynaptic actin cytoskeleton organization GO:0003779F:actin binding GO:0051015F:actin filament binding GO:0005856C:cytoskeleton GO:0005884C:actin filament GO:0014069C:postsynaptic density GO:0030027C:lamellipodium GO:0030425C:dendrite GO:0030427C:site of polarized growth GO:0030864C:cortical actin cytoskeleton GO:0045211C:postsynaptic membrane |
- |
| 9508 |
SRR941867_primary_scf7180002041481_1881-4892
Len: 3,011 bp
E-val: 1.8E-33
|
RXN21664.1chromodomain-helicase-DNA-binding 3-like protein
DNA helicase; DNA 3'-5' helicase; nucleoside-triphosphate phosphatase
|
GO:0006338P:chromatin remodeling GO:0007417P:central nervous system development GO:0048589P:developmental growth GO:0003677F:DNA binding GO:0003682F:chromatin binding GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0009378F:four-way junction helicase activity GO:0016887F:ATP hydrolysis activity GO:0036121F:double-stranded DNA helicase activity GO:0042393F:histone binding GO:0061749F:forked DNA-dependent helicase activity GO:0140658F:ATP-dependent chromatin remodeler activity GO:1990518F:single-stranded 3'-5' DNA helicase activity GO:0016581C:NuRD complex |
EC:EC:3.6.4.12 EC:EC:5.6.2.4 EC:EC:3.6.1.15 |
| 9509 |
SRR941867_primary_scf7180002041498_1323-1913
Len: 590 bp
E-val: 4.6E-82
|
XP_018977020.1PREDICTED: LOW QUALITY PROTEIN: protein unc-79 homolog
|
GO:0008270F:zinc ion binding |
- |
| 9510 |
SRR941867_primary_scf7180002041523_201-785
Len: 584 bp
E-val: 3.2E-80
|
XP_018950087.1PREDICTED: mediator of RNA polymerase II transcription subunit 23-like
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0010628P:positive regulation of gene expression GO:0043473P:pigmentation GO:0050768P:negative regulation of neurogenesis GO:0072359P:circulatory system development GO:0005667C:transcription regulator complex GO:0016592C:mediator complex |
- |
| 9511 |
SRR941867_primary_scf7180002041523_1378-1921
Len: 543 bp
E-val: 8.1E-33
|
KTG04080.1hypothetical protein cypCar_00030556, partial
|
GO:0010468P:regulation of gene expression GO:0043473P:pigmentation GO:0050768P:negative regulation of neurogenesis GO:0072359P:circulatory system development GO:0005634C:nucleus GO:0032991C:protein-containing complex |
- |
| 9512 |
SRR941867_primary_scf7180002041536_1-3418
Len: 3,417 bp
E-val: 6.2E-30
|
KTF86792.1hypothetical protein cypCar_00034880
E1 NEDD8-activating enzyme
|
GO:0007165P:signal transduction GO:0045116P:protein neddylation GO:0005524F:ATP binding GO:0019781F:NEDD8 activating enzyme activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
EC:EC:6.2.1.64 |
| 9513 |
SRR941867_primary_scf7180002041546_2017-2289
Len: 272 bp
E-val: 1.4E-33
|
XP_016089929.1PREDICTED: dnaJ homolog subfamily B member 5-like
|
GO:0006457P:protein folding GO:0036503P:ERAD pathway GO:0051082F:unfolded protein binding GO:0051087F:protein-folding chaperone binding GO:0051787F:misfolded protein binding GO:0005783C:endoplasmic reticulum GO:0005829C:cytosol |
- |
| 9514 |
SRR941867_primary_scf7180002041578_1-3034
Len: 3,033 bp
E-val: 3.6E-146
|
KTF80071.1hypothetical protein cypCar_00025496, partial
|
GO:0007156P:homophilic cell-cell adhesion GO:0009653P:anatomical structure morphogenesis GO:0005509F:calcium ion binding GO:0005886C:plasma membrane |
- |
| 9515 |
SRR941867_primary_scf7180002041579_275-3805
Len: 3,530 bp
E-val: 0.0
|
XP_018920326.1PREDICTED: rho GTPase-activating protein 35-like
nucleoside-triphosphate phosphatase
|
GO:0007266P:Rho protein signal transduction GO:0008361P:regulation of cell size GO:0050770P:regulation of axonogenesis GO:0003924F:GTPase activity GO:0005096F:GTPase activator activity GO:0005525F:GTP binding GO:0008289F:lipid binding GO:0005634C:nucleus GO:0005829C:cytosol GO:0005856C:cytoskeleton GO:0005886C:plasma membrane GO:0042995C:cell projection |
EC:EC:3.6.1.15 |
| 9516 |
SRR941867_primary_scf7180002041583_1-3261
Len: 3,260 bp
E-val: 6.7E-66
|
ACQ99544.1liver X receptor
|
GO:0006355P:regulation of DNA-templated transcription |
- |
| 9517 |
SRR941867_primary_scf7180002041641_1-3518
Len: 3,517 bp
E-val: 5.2E-40
|
KTG36731.1hypothetical protein cypCar_00026516
|
GO:0070588P:calcium ion transmembrane transport GO:0005245F:voltage-gated calcium channel activity GO:0005891C:voltage-gated calcium channel complex |
- |
| 9518 |
SRR941867_primary_scf7180002041651_1606-2142
Len: 536 bp
E-val: 3.3E-95
|
KTG43723.1hypothetical protein cypCar_00013596
NADP-retinol dehydrogenase; alcohol dehydrogenase (NADP(+))
|
GO:0042572P:retinol metabolic process GO:0046872F:metal ion binding GO:0052650F:all-trans-retinol dehydrogenase (NADP+) activity GO:0016020C:membrane |
EC:EC:1.1.1.300 EC:EC:1.1.1.2 |
| 9519 |
SRR941867_primary_scf7180002041663_1029-1283
Len: 254 bp
E-val: 7.8E-39
|
XP_018937450.1PREDICTED: calsequestrin-1-like
|
GO:0014809P:regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion GO:0005509F:calcium ion binding GO:0030018C:Z disc GO:0033018C:sarcoplasmic reticulum lumen |
- |
| 9520 |
SRR941867_primary_scf7180002041673_1-2925
Len: 2,924 bp
E-val: 3.3E-56
|
KTF78244.1hypothetical protein cypCar_00027001
|
- | |
| 9521 |
SRR941867_primary_scf7180002041696_1-1055
Len: 1,054 bp
E-val: 1.7E-156
|
RXN10138.1fascin-2
|
GO:0007163P:establishment or maintenance of cell polarity GO:0016477P:cell migration GO:0051017P:actin filament bundle assembly GO:0030674F:protein-macromolecule adaptor activity GO:0051015F:actin filament binding GO:0005737C:cytoplasm GO:0015629C:actin cytoskeleton |
- |
| 9522 |
SRR941867_primary_scf7180002041721_654-1850
Len: 1,196 bp
E-val: 1.8E-48
|
KTG02181.1hypothetical protein cypCar_00017128
|
GO:0005730C:nucleolus GO:0005829C:cytosol |
- |
| 9523 |
SRR941867_primary_scf7180002041736_1-1779
Len: 1,778 bp
E-val: 5.6E-6
|
XP_021437121.1calcium-activated potassium channel subunit alpha-1-like
|
GO:0006813P:potassium ion transport GO:0055085P:transmembrane transport GO:0071805P:potassium ion transmembrane transport GO:0005216F:monoatomic ion channel activity GO:0005267F:potassium channel activity GO:0060072F:large conductance calcium-activated potassium channel activity GO:0005886C:plasma membrane GO:0016020C:membrane GO:0034702C:monoatomic ion channel complex GO:0045211C:postsynaptic membrane |
- |
| 9524 |
SRR941867_primary_scf7180002041740_1666-2478
Len: 812 bp
E-val: 3.4E-136
|
XP_018931376.1PREDICTED: claudin-8-like
|
GO:0007155P:cell adhesion GO:0070830P:bicellular tight junction assembly GO:0005198F:structural molecule activity GO:0005886C:plasma membrane GO:0005923C:bicellular tight junction |
- |
| 9525 |
SRR941867_primary_scf7180002041749_1-3737
Len: 3,736 bp
E-val: 2.0E-45
|
XP_018962314.1PREDICTED: RAB6A-GEF complex partner protein 2-like isoform X1
|
GO:0042147P:retrograde transport, endosome to Golgi GO:0061035P:regulation of cartilage development GO:0070278P:extracellular matrix constituent secretion GO:0000139C:Golgi membrane GO:0034066C:Ric1-Rgp1 guanyl-nucleotide exchange factor complex |
- |