Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 12026 |
SRR941867_primary_scf7180002118627_1-757
Len: 756 bp
E-val: 4.7E-39
|
XP_018950239.1PREDICTED: receptor tyrosine-protein kinase erbB-4-like
receptor protein-tyrosine kinase
|
GO:0007173P:epidermal growth factor receptor signaling pathway GO:0008284P:positive regulation of cell population proliferation GO:0008286P:insulin receptor signaling pathway GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0009966P:regulation of signal transduction GO:0022008P:neurogenesis GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0043066P:negative regulation of apoptotic process GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005154F:epidermal growth factor receptor binding GO:0005524F:ATP binding GO:0008288F:boss receptor activity GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0009925C:basal plasma membrane GO:0012505C:endomembrane system GO:0043235C:receptor complex |
EC:EC:2.7.10.1 |
| 12027 |
SRR941867_primary_scf7180002118724_1-1039
Len: 1,038 bp
E-val: 9.0E-57
|
KTG32493.1hypothetical protein cypCar_00032676, partial
|
GO:0009056P:catabolic process GO:0022411P:cellular component disassembly GO:0005488F:binding GO:0005737C:cytoplasm GO:0043231C:intracellular membrane-bounded organelle |
- |
| 12028 |
SRR941867_primary_scf7180002118742_1-625
Len: 624 bp
E-val: 3.5E-16
|
KTF92588.1hypothetical protein cypCar_00022298
alpha-mannosidase
|
GO:0006013P:mannose metabolic process GO:0006491P:N-glycan processing GO:0004559F:alpha-mannosidase activity GO:0030246F:carbohydrate binding GO:0046872F:metal ion binding GO:0000139C:Golgi membrane |
EC:EC:3.2.1.24 |
| 12029 |
SRR941867_primary_scf7180002118890_325-1127
Len: 802 bp
E-val: 9.5E-22
|
XP_018953415.1PREDICTED: cathepsin L1-like
Acting on peptide bonds (peptidases)
|
GO:0051603P:proteolysis involved in protein catabolic process GO:0004197F:cysteine-type endopeptidase activity GO:0005615C:extracellular space GO:0005764C:lysosome GO:0016020C:membrane |
EC:EC:3.4.22 |
| 12030 |
SRR941867_primary_scf7180002118974_1-1312
Len: 1,311 bp
E-val: 2.5E-35
|
KTG04164.1hypothetical protein cypCar_00016659
|
-
|
- |
| 12031 |
SRR941867_primary_scf7180002118981_1-1095
Len: 1,094 bp
E-val: 6.6E-42
|
XP_026102047.1protein kinase C-binding protein 1-like isoform X4
Transferring phosphorus-containing groups
|
GO:0045892P:negative regulation of DNA-templated transcription GO:0003714F:transcription corepressor activity GO:0008270F:zinc ion binding GO:0016301F:kinase activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
EC:EC:2.7 |
| 12032 |
SRR941867_primary_scf7180002119057_286-1460
Len: 1,174 bp
E-val: 7.6E-12
|
KTG00428.1hypothetical protein cypCar_00005129
|
GO:1900745P:positive regulation of p38MAPK cascade GO:0005886C:plasma membrane |
- |
| 12033 |
SRR941867_primary_scf7180002119116_818-1352
Len: 534 bp
E-val: 4.5E-28
|
KTF74182.1hypothetical protein cypCar_00040536
|
-
|
- |
| 12034 |
SRR941867_primary_scf7180002119251_1-769
Len: 768 bp
E-val: 1.6E-39
|
XP_016383069.1PREDICTED: LOW QUALITY PROTEIN: formin-like protein 1
|
GO:0008360P:regulation of cell shape GO:0016477P:cell migration GO:0030866P:cortical actin cytoskeleton organization GO:0031267F:small GTPase binding GO:0051015F:actin filament binding GO:0005829C:cytosol |
- |
| 12035 |
SRR941867_primary_scf7180002119400_561-866
Len: 305 bp
E-val: 6.9E-50
|
KTG42371.1hypothetical protein cypCar_00009842
|
GO:0035249P:synaptic transmission, glutamatergic GO:0035725P:sodium ion transmembrane transport GO:0044341P:sodium-dependent phosphate transport GO:0050803P:regulation of synapse structure or activity GO:0050957P:equilibrioception GO:0051631P:regulation of acetylcholine uptake GO:0051951P:positive regulation of glutamate uptake involved in transmission of nerve impulse GO:0055062P:phosphate ion homeostasis GO:0060005P:vestibular reflex GO:0098700P:neurotransmitter loading into synaptic vesicle GO:1902476P:chloride transmembrane transport GO:0005254F:chloride channel activity GO:0005326F:neurotransmitter transmembrane transporter activity GO:0005436F:sodium:phosphate symporter activity GO:0140788F:L-glutamate uniporter activity GO:0005886C:plasma membrane GO:0030672C:synaptic vesicle membrane GO:0034707C:chloride channel complex GO:0043005C:neuron projection GO:0060076C:excitatory synapse |
- |
| 12036 |
SRR941867_primary_scf7180002119534_1-456
Len: 455 bp
E-val: 2.4E-14
|
KTG46122.1hypothetical protein cypCar_00008302
Transferring phosphorus-containing groups
|
GO:0051209P:release of sequestered calcium ion into cytosol GO:0016301F:kinase activity GO:0019901F:protein kinase binding GO:0030292F:protein tyrosine kinase inhibitor activity GO:0005654C:nucleoplasm GO:0005737C:cytoplasm |
EC:EC:2.7 |
| 12037 |
SRR941867_primary_scf7180002119614_1-1116
Len: 1,115 bp
E-val: 7.0E-15
|
KTG37053.1hypothetical protein cypCar_00003660
|
GO:0006869P:lipid transport |
- |
| 12038 |
SRR941867_primary_scf7180002119966_1-1355
Len: 1,354 bp
E-val: 6.4E-164
|
XP_017341366.1PREDICTED: zinc finger BED domain-containing protein 1-like
Ligases
|
GO:0016874F:ligase activity GO:0046983F:protein dimerization activity |
EC:EC:6 |
| 12039 |
SRR941867_primary_scf7180002120104_1-184
Len: 183 bp
E-val: 1.4E-26
|
XP_026095040.1very long-chain acyl-CoA synthetase-like
long-chain-fatty-acid--CoA ligase
|
GO:0001676P:long-chain fatty acid metabolic process GO:0044539P:long-chain fatty acid import into cell GO:0004467F:long-chain fatty acid-CoA ligase activity GO:0005324F:long-chain fatty acid transmembrane transporter activity GO:0005789C:endoplasmic reticulum membrane GO:0005886C:plasma membrane |
EC:EC:6.2.1.3 |
| 12040 |
SRR941867_primary_scf7180002120109_316-1321
Len: 1,005 bp
E-val:
|
-
|
-
|
- |
| 12041 |
SRR941867_primary_scf7180002120269_1-614
Len: 613 bp
E-val: 1.0E-23
|
XP_016382287.1PREDICTED: stathmin-4-like
|
GO:0007019P:microtubule depolymerization GO:0031110P:regulation of microtubule polymerization or depolymerization GO:0031175P:neuron projection development GO:0045664P:regulation of neuron differentiation GO:1902749P:regulation of cell cycle G2/M phase transition GO:0015631F:tubulin binding GO:0005794C:Golgi apparatus GO:0016020C:membrane GO:0043005C:neuron projection |
- |
| 12042 |
SRR941867_primary_scf7180002120375_1-1258
Len: 1,257 bp
E-val: 4.8E-20
|
XP_026080922.1storkhead-box protein 2-like isoform X1
|
GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
- |
| 12043 |
SRR941867_primary_scf7180002120447_1-1266
Len: 1,265 bp
E-val: 5.3E-51
|
XP_018945736.1PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
|
GO:0006351P:DNA-templated transcription GO:0042254P:ribosome biogenesis GO:0048703P:embryonic viscerocranium morphogenesis GO:0051216P:cartilage development GO:0000428C:DNA-directed RNA polymerase complex GO:0140513C:nuclear protein-containing complex |
- |
| 12044 |
SRR941867_primary_scf7180002120494_1-873
Len: 872 bp
E-val: 7.1E-23
|
XP_016379154.1PREDICTED: heterogeneous nuclear ribonucleoprotein Q, partial
|
- | |
| 12045 |
SRR941867_primary_scf7180002120638_1004-1436
Len: 432 bp
E-val: 3.1E-59
|
KTG02781.1hypothetical protein cypCar_00041247
receptor protein-tyrosine kinase
|
GO:0007156P:homophilic cell-cell adhesion GO:0007169P:cell surface receptor protein tyrosine kinase signaling pathway GO:0007411P:axon guidance GO:0016055P:Wnt signaling pathway GO:0060027P:convergent extension involved in gastrulation GO:0070593P:dendrite self-avoidance GO:0004714F:transmembrane receptor protein tyrosine kinase activity GO:0005524F:ATP binding GO:0017147F:Wnt-protein binding GO:0046982F:protein heterodimerization activity GO:0098632F:cell-cell adhesion mediator activity GO:0005886C:plasma membrane GO:0030424C:axon GO:0043235C:receptor complex |
EC:EC:2.7.10.1 |
| 12046 |
SRR941867_primary_scf7180002120800_130-671
Len: 541 bp
E-val: 1.0E-32
|
KTF80938.1hypothetical protein cypCar_00021914
|
GO:0000281P:mitotic cytokinesis GO:0007399P:nervous system development GO:0035556P:intracellular signal transduction GO:2000431P:regulation of cytokinesis, actomyosin contractile ring assembly GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005096F:GTPase activator activity GO:0005634C:nucleus GO:0005938C:cell cortex |
- |
| 12047 |
SRR941867_primary_scf7180002120808_62-398
Len: 336 bp
E-val: 5.2E-14
|
RXN24130.1sodium hydrogen exchanger 8
|
GO:0030001P:metal ion transport GO:0098655P:monoatomic cation transmembrane transport GO:0015297F:antiporter activity GO:0110165C:cellular anatomical structure |
- |
| 12048 |
SRR941867_primary_scf7180002121113_1-912
Len: 911 bp
E-val: 1.2E-17
|
KTF88516.1hypothetical protein cypCar_00033814, partial
|
GO:0001755P:neural crest cell migration GO:0007411P:axon guidance GO:0030335P:positive regulation of cell migration GO:0050919P:negative chemotaxis GO:0071526P:semaphorin-plexin signaling pathway GO:0030215F:semaphorin receptor binding GO:0045499F:chemorepellent activity GO:0005886C:plasma membrane |
- |
| 12049 |
SRR941867_primary_scf7180002121450_1-984
Len: 983 bp
E-val: 7.0E-35
|
XP_026106486.1G-protein coupled receptor 98-like, partial
Hydrolases
|
GO:0007166P:cell surface receptor signaling pathway GO:0007186P:G protein-coupled receptor signaling pathway GO:0007194P:negative regulation of adenylate cyclase activity GO:0007601P:visual perception GO:0007605P:sensory perception of sound GO:0031647P:regulation of protein stability GO:0042462P:eye photoreceptor cell development GO:0071277P:cellular response to calcium ion GO:0097264P:self proteolysis GO:0001965F:G-protein alpha-subunit binding GO:0004930F:G protein-coupled receptor activity GO:0010855F:adenylate cyclase inhibitor activity GO:0016787F:hydrolase activity GO:0001917C:photoreceptor inner segment GO:0005737C:cytoplasm GO:0060171C:stereocilium membrane |
EC:EC:3 |
| 12050 |
SRR941867_primary_scf7180002121489_1-888
Len: 887 bp
E-val: 7.5E-28
|
KPP60508.1transcription factor RFX3-like
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007283P:spermatogenesis GO:0030030P:cell projection organization GO:0030154P:cell differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus GO:0005737C:cytoplasm |
- |