Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 12076 |
SRR941867_primary_scf7180002126673_1-924
Len: 923 bp
E-val: 4.6E-20
|
XP_026055320.1DNA (cytosine-5)-methyltransferase 3B-like isoform X1
DNA (cytosine-5-)-methyltransferase
|
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0032259P:methylation GO:0044027P:negative regulation of gene expression via chromosomal CpG island methylation GO:0060271P:cilium assembly GO:0061371P:determination of heart left/right asymmetry GO:0061484P:hematopoietic stem cell homeostasis GO:0070121P:Kupffer's vesicle development GO:1902036P:regulation of hematopoietic stem cell differentiation GO:0003677F:DNA binding GO:0008270F:zinc ion binding GO:0051718F:DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates GO:0051719F:DNA (cytosine-5-)-methyltransferase activity, acting on CpN substrates GO:0051720F:DNA (cytosine-5-)-methyltransferase activity, acting on CpNpG substrates GO:0005634C:nucleus |
EC:EC:2.1.1.37 |
| 12077 |
SRR941867_primary_scf7180002126938_1-1381
Len: 1,380 bp
E-val: 1.3E-39
|
KTG35165.1hypothetical protein cypCar_00015243
|
- | |
| 12078 |
SRR941867_primary_scf7180002127526_370-736
Len: 366 bp
E-val: 3.8E-18
|
XP_018949368.1PREDICTED: heat shock protein 105 kDa-like isoform X1
|
GO:0006457P:protein folding GO:0000774F:adenyl-nucleotide exchange factor activity GO:0005524F:ATP binding GO:0140662F:ATP-dependent protein folding chaperone GO:0005634C:nucleus GO:0005829C:cytosol |
- |
| 12079 |
SRR941867_primary_scf7180002127892_7-1124
Len: 1,117 bp
E-val: 1.2E-17
|
XP_018972446.1PREDICTED: leucine-rich repeat-containing protein 28
|
GO:0035556P:intracellular signal transduction GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0046983F:protein dimerization activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
- |
| 12080 |
SRR941867_primary_scf7180002128083_1-791
Len: 790 bp
E-val: 2.2E-18
|
CAG06903.1unnamed protein product, partial
Hydrolases
|
GO:0016787F:hydrolase activity |
EC:EC:3 |
| 12081 |
SRR941867_primary_scf7180002131277_211-948
Len: 737 bp
E-val: 7.8E-31
|
KTF89495.1hypothetical protein cypCar_00029726
|
-
|
- |
| 12082 |
SRR941867_primary_scf7180002131536_1-516
Len: 515 bp
E-val: 1.8E-26
|
XP_016091535.1PREDICTED: heat shock 70 kDa protein 12A-like
|
-
|
- |
| 12083 |
SRR941867_primary_scf7180002134474_507-1373
Len: 866 bp
E-val: 4.2E-60
|
KTG31438.1hypothetical protein cypCar_00002555
|
GO:0006508P:proteolysis GO:0004222F:metalloendopeptidase activity GO:0008233F:peptidase activity GO:0008237F:metallopeptidase activity GO:0008270F:zinc ion binding GO:0046872F:metal ion binding |
- |
| 12084 |
SRR941867_primary_scf7180002146927_1-1052
Len: 1,051 bp
E-val: 1.5E-46
|
KTG34060.1hypothetical protein cypCar_00045125
Acting on peptide bonds (peptidases); uroporphyrinogen-III synthase
|
GO:0006508P:proteolysis GO:0006782P:protoporphyrinogen IX biosynthetic process GO:0030198P:extracellular matrix organization GO:0030574P:collagen catabolic process GO:0060971P:embryonic heart tube left/right pattern formation GO:1901207P:regulation of heart looping GO:0004222F:metalloendopeptidase activity GO:0004852F:uroporphyrinogen-III synthase activity GO:0008270F:zinc ion binding GO:0031012C:extracellular matrix |
EC:EC:3.4.24 EC:EC:4.2.1.75 |
| 12085 |
SRR941867_primary_scf7180002147064_1-5720
Len: 5,719 bp
E-val: 3.8E-48
|
KTG42356.1hypothetical protein cypCar_00017876, partial
|
GO:0001889P:liver development GO:0006357P:regulation of transcription by RNA polymerase II GO:0030073P:insulin secretion GO:0031016P:pancreas development GO:0045893P:positive regulation of DNA-templated transcription GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
- |
| 12086 |
SRR941867_primary_scf7180002147073_566-3789
Len: 3,223 bp
E-val: 1.3E-53
|
KTG41548.1hypothetical protein cypCar_00008477, partial
|
GO:0005488F:binding |
- |
| 12087 |
SRR941867_primary_scf7180002147073_4557-5066
Len: 509 bp
E-val: 2.2E-24
|
XP_016324529.1PREDICTED: uncharacterized protein LOC107674898
|
GO:0008152P:metabolic process |
- |
| 12088 |
SRR941867_primary_scf7180002147076_1-3488
Len: 3,487 bp
E-val: 9.6E-228
|
KTF89252.1hypothetical protein cypCar_00004675
|
GO:0030036P:actin cytoskeleton organization GO:0035023P:regulation of Rho protein signal transduction GO:0005096F:GTPase activator activity GO:0008289F:lipid binding GO:0005737C:cytoplasm GO:0005925C:focal adhesion GO:0045121C:membrane raft |
- |
| 12089 |
SRR941867_primary_scf7180002147077_1-5741
Len: 5,740 bp
E-val: 2.9E-32
|
XP_016099182.1PREDICTED: solute carrier family 45 member 4-like
|
GO:0015770P:sucrose transport GO:0055085P:transmembrane transport GO:0008506F:sucrose:proton symporter activity GO:0016020C:membrane |
- |
| 12090 |
SRR941867_primary_scf7180002147097_1-4484
Len: 4,483 bp
E-val: 0.0
|
XP_018930866.1PREDICTED: LOW QUALITY PROTEIN: protein transport protein Sec16A-like
|
GO:0006810P:transport GO:0009987P:cellular process GO:0005737C:cytoplasm GO:0012505C:endomembrane system GO:0016020C:membrane GO:0043231C:intracellular membrane-bounded organelle |
- |
| 12091 |
SRR941867_primary_scf7180002147113_1-4624
Len: 4,623 bp
E-val: 2.7E-89
|
KTF91267.1hypothetical protein cypCar_00015346, partial
|
GO:0001682P:tRNA 5'-leader removal GO:0000172C:ribonuclease MRP complex GO:0005655C:nucleolar ribonuclease P complex |
- |
| 12092 |
SRR941867_primary_scf7180002147175_1-5738
Len: 5,737 bp
E-val: 2.4E-10
|
XP_016357445.1PREDICTED: probable voltage-dependent R-type calcium channel subunit alpha-1E
|
-
|
- |
| 12093 |
SRR941867_primary_scf7180002147178_2006-2713
Len: 707 bp
E-val: 2.2E-83
|
XP_016113620.1PREDICTED: serine/threonine-protein kinase TAO2-like isoform X4
|
GO:0030901P:midbrain development |
- |
| 12094 |
SRR941867_primary_scf7180002147186_2580-3987
Len: 1,407 bp
E-val: 8.9E-100
|
XP_016094739.1PREDICTED: receptor tyrosine-protein kinase erbB-4-like
receptor protein-tyrosine kinase
|
GO:0007173P:epidermal growth factor receptor signaling pathway GO:0008286P:insulin receptor signaling pathway GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0030182P:neuron differentiation GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0043066P:negative regulation of apoptotic process GO:0043410P:positive regulation of MAPK cascade GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0050679P:positive regulation of epithelial cell proliferation GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005154F:epidermal growth factor receptor binding GO:0005524F:ATP binding GO:0008288F:boss receptor activity GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0009925C:basal plasma membrane GO:0012505C:endomembrane system GO:0043235C:receptor complex |
EC:EC:2.7.10.1 |
| 12095 |
SRR941867_primary_scf7180002147192_1-2401
Len: 2,400 bp
E-val: 8.5E-26
|
XP_026079435.1serine/arginine-rich splicing factor 5-like
|
- | |
| 12096 |
SRR941867_primary_scf7180002147227_2427-3368
Len: 941 bp
E-val: 9.5E-98
|
BAB32498.1G protein-coupled receptor kinase 7
rhodopsin kinase; [G-protein-coupled receptor] kinase
|
GO:0007601P:visual perception GO:0007603P:phototransduction, visible light GO:0036368P:cone photoresponse recovery GO:0009881F:photoreceptor activity GO:0050254F:rhodopsin kinase activity |
EC:EC:2.7.11.14 EC:EC:2.7.11.16 |
| 12097 |
SRR941867_primary_scf7180002147242_1-5097
Len: 5,096 bp
E-val: 3.2E-83
|
XP_016107777.1PREDICTED: uncharacterized protein LOC107566763, partial
|
-
|
- |
| 12098 |
SRR941867_primary_scf7180002147246_1-1435
Len: 1,434 bp
E-val: 1.2E-136
|
KTG04853.1hypothetical protein cypCar_00039572
|
GO:0016020C:membrane |
- |
| 12099 |
SRR941867_primary_scf7180002147264_1-3713
Len: 3,712 bp
E-val: 7.7E-159
|
XP_018930358.1PREDICTED: Krueppel-like factor 5 isoform X1
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding |
- |
| 12100 |
SRR941867_primary_scf7180002147269_1-3420
Len: 3,419 bp
E-val: 1.5E-121
|
XP_016109969.1PREDICTED: cadherin-23-like
|
GO:0007423P:sensory organ development GO:0030030P:cell projection organization GO:0035315P:hair cell differentiation GO:0042490P:mechanoreceptor differentiation GO:0048666P:neuron development GO:0050954P:sensory perception of mechanical stimulus GO:0051179P:localization GO:0005515F:protein binding GO:0110165C:cellular anatomical structure |
- |