Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 12351 |
SRR941867_primary_scf7180002152300_91-1875
Len: 1,784 bp
E-val: 2.2E-55
|
XP_017210771.1UPF0606 protein KIAA1549 isoform X1
|
GO:0016020C:membrane |
- |
| 12352 |
SRR941867_primary_scf7180002152314_1-3406
Len: 3,405 bp
E-val: 5.4E-26
|
XP_018937574.1PREDICTED: U2 snRNP-associated SURP motif-containing protein-like, partial
|
GO:0006396P:RNA processing GO:0003723F:RNA binding GO:0000139C:Golgi membrane GO:0005634C:nucleus GO:0005794C:Golgi apparatus GO:0016020C:membrane |
- |
| 12353 |
SRR941867_primary_scf7180002152322_1-1971
Len: 1,970 bp
E-val: 9.1E-18
|
KTG31344.1hypothetical protein cypCar_00026101
|
GO:0007186P:G protein-coupled receptor signaling pathway GO:0007602P:phototransduction GO:0009584P:detection of visible light GO:0071482P:cellular response to light stimulus GO:0008020F:G protein-coupled photoreceptor activity GO:0001750C:photoreceptor outer segment GO:0005886C:plasma membrane |
- |
| 12354 |
SRR941867_primary_scf7180002152368_1-638
Len: 637 bp
E-val: 4.0E-55
|
XP_026128115.1vertebrate ancient opsin-like
|
GO:0007186P:G protein-coupled receptor signaling pathway GO:0007601P:visual perception GO:0007602P:phototransduction GO:0009584P:detection of visible light GO:0071482P:cellular response to light stimulus GO:0008020F:G protein-coupled photoreceptor activity GO:0001750C:photoreceptor outer segment GO:0005886C:plasma membrane |
- |
| 12355 |
SRR941867_primary_scf7180002152372_1-1488
Len: 1,487 bp
E-val: 3.4E-41
|
KTG04280.1hypothetical protein cypCar_00008831
|
GO:0006355P:regulation of DNA-templated transcription GO:0006357P:regulation of transcription by RNA polymerase II GO:0071456P:cellular response to hypoxia GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003700F:DNA-binding transcription factor activity GO:0046983F:protein dimerization activity GO:0005634C:nucleus GO:0005667C:transcription regulator complex GO:0005737C:cytoplasm |
- |
| 12356 |
SRR941867_primary_scf7180002152381_379-2040
Len: 1,661 bp
E-val: 3.5E-63
|
XP_018942209.1PREDICTED: LOW QUALITY PROTEIN: fibronectin-like
|
GO:0006953P:acute-phase response GO:0007044P:cell-substrate junction assembly GO:0007155P:cell adhesion GO:0007160P:cell-matrix adhesion GO:0007399P:nervous system development GO:0007507P:heart development GO:0008360P:regulation of cell shape GO:0005178F:integrin binding GO:0005201F:extracellular matrix structural constituent GO:0008201F:heparin binding GO:0043394F:proteoglycan binding GO:0005576C:extracellular region GO:0005615C:extracellular space |
- |
| 12357 |
SRR941867_primary_scf7180002152397_1136-3080
Len: 1,944 bp
E-val: 4.1E-236
|
KTF81718.1hypothetical protein cypCar_00017577
|
GO:0010811P:positive regulation of cell-substrate adhesion GO:0030198P:extracellular matrix organization GO:0005576C:extracellular region GO:0005604C:basement membrane |
- |
| 12358 |
SRR941867_primary_scf7180002152407_240-2478
Len: 2,238 bp
E-val: 9.9E-61
|
XP_018938980.1PREDICTED: LOW QUALITY PROTEIN: histone-lysine N-methyltransferase 2E-like
|
GO:0006325P:chromatin organization GO:0006355P:regulation of DNA-templated transcription GO:0008270F:zinc ion binding GO:0035064F:obsolete methylated histone binding GO:0034967C:Set3 complex GO:0070210C:Rpd3L-Expanded complex |
- |
| 12359 |
SRR941867_primary_scf7180002152428_1-2599
Len: 2,598 bp
E-val: 6.0E-25
|
KTF88707.1hypothetical protein cypCar_00014110
|
GO:0005978P:glycogen biosynthetic process GO:0005980P:glycogen catabolic process GO:0004134F:4-alpha-glucanotransferase activity GO:0004135F:amylo-alpha-1,6-glucosidase activity GO:0016757F:glycosyltransferase activity GO:0016798F:hydrolase activity, acting on glycosyl bonds GO:0005737C:cytoplasm |
- |
| 12360 |
SRR941867_primary_scf7180002152438_223-2227
Len: 2,004 bp
E-val: 1.4E-103
|
XP_016403268.1PREDICTED: mothers against decapentaplegic homolog 6-like
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0010172P:embryonic body morphogenesis GO:0030154P:cell differentiation GO:0060395P:SMAD protein signal transduction GO:0046872F:metal ion binding GO:0070411F:I-SMAD binding GO:0140416F:transcription regulator inhibitor activity GO:0005737C:cytoplasm GO:0071144C:heteromeric SMAD protein complex |
- |
| 12361 |
SRR941867_primary_scf7180002152459_86-1388
Len: 1,302 bp
E-val: 3.8E-44
|
KTF80496.1hypothetical protein cypCar_00009313
DNA helicase; DNA 3'-5' helicase
|
GO:0000724P:double-strand break repair via homologous recombination GO:0006355P:regulation of DNA-templated transcription GO:0003676F:nucleic acid binding GO:0005524F:ATP binding GO:0009378F:four-way junction helicase activity GO:0016787F:hydrolase activity GO:0036121F:double-stranded DNA helicase activity GO:0061749F:forked DNA-dependent helicase activity GO:1990518F:single-stranded 3'-5' DNA helicase activity GO:0005634C:nucleus GO:0005694C:chromosome GO:0005737C:cytoplasm |
EC:EC:3.6.4.12 EC:EC:5.6.2.4 |
| 12362 |
SRR941867_primary_scf7180002152466_2-1889
Len: 1,887 bp
E-val: 8.9E-87
|
ROL46982.1Myelin transcription factor 1
|
GO:1904888P:cranial skeletal system development |
- |
| 12363 |
SRR941867_primary_scf7180002152488_1-753
Len: 752 bp
E-val: 3.7E-76
|
XP_016304004.1PREDICTED: histone-lysine N-methyltransferase SETMAR-like
Transferring one-carbon groups
|
GO:0006338P:chromatin remodeling GO:0019722P:calcium-mediated signaling GO:0032259P:methylation GO:0051209P:release of sequestered calcium ion into cytosol GO:0003690F:double-stranded DNA binding GO:0005220F:inositol 1,4,5-trisphosphate-gated calcium channel activity GO:0008270F:zinc ion binding GO:0046974F:histone H3K9 methyltransferase activity GO:0070679F:inositol 1,4,5 trisphosphate binding GO:0005634C:nucleus GO:0005694C:chromosome GO:0005789C:endoplasmic reticulum membrane GO:0030658C:transport vesicle membrane |
EC:EC:2.1.1 |
| 12364 |
SRR941867_primary_scf7180002152496_1400-1834
Len: 434 bp
E-val: 2.6E-66
|
XP_018934305.1PREDICTED: neurocalcin-delta B-like isoform X2
|
GO:0003073P:regulation of systemic arterial blood pressure GO:0009966P:regulation of signal transduction GO:0019722P:calcium-mediated signaling GO:0048841P:regulation of axon extension involved in axon guidance GO:0003779F:actin binding GO:0005509F:calcium ion binding GO:0030276F:clathrin binding GO:0043014F:alpha-tubulin binding GO:0016020C:membrane |
- |
| 12365 |
SRR941867_primary_scf7180002152505_1-2481
Len: 2,480 bp
E-val: 1.3E-85
|
XP_018934409.1PREDICTED: LOW QUALITY PROTEIN: nuclear-interacting partner of ALK-like
|
GO:0008150P:biological_process GO:0003674F:molecular_function GO:0008270F:zinc ion binding GO:0005634C:nucleus |
- |
| 12366 |
SRR941867_primary_scf7180002152524_622-1320
Len: 698 bp
E-val: 3.7E-131
|
XP_018949759.1PREDICTED: leucine-rich repeat-containing protein 3-like
|
- | |
| 12367 |
SRR941867_primary_scf7180002152545_1129-1906
Len: 777 bp
E-val: 1.3E-12
|
XP_026059877.1sister chromatid cohesion protein PDS5 homolog A isoform X1
|
GO:0006281P:DNA repair GO:0007064P:mitotic sister chromatid cohesion GO:0008156P:negative regulation of DNA replication GO:0051301P:cell division GO:0000785C:chromatin GO:0005634C:nucleus |
- |
| 12368 |
SRR941867_primary_scf7180002152616_1-2847
Len: 2,846 bp
E-val: 7.1E-72
|
KTG04991.1hypothetical protein cypCar_00006307
Hydrolases
|
GO:0030048P:actin filament-based movement GO:0003779F:actin binding GO:0015075F:monoatomic ion transmembrane transporter activity GO:0016787F:hydrolase activity GO:0032555F:purine ribonucleotide binding GO:0035639F:purine ribonucleoside triphosphate binding GO:0005634C:nucleus GO:0005884C:actin filament GO:0016020C:membrane |
EC:EC:3 |
| 12369 |
SRR941867_primary_scf7180002152658_1-2316
Len: 2,315 bp
E-val: 2.1E-295
|
XP_018978453.1PREDICTED: zinc finger protein 618 isoform X1
|
GO:0005488F:binding |
- |
| 12370 |
SRR941867_primary_scf7180002152680_718-1413
Len: 695 bp
E-val: 1.4E-127
|
KTF71048.1hypothetical protein cypCar_00032189
|
GO:0006939P:smooth muscle contraction GO:0007268P:chemical synaptic transmission GO:0007623P:circadian rhythm GO:0042310P:vasoconstriction GO:0043410P:positive regulation of MAPK cascade GO:0071880P:adenylate cyclase-activating adrenergic receptor signaling pathway GO:0071881P:adenylate cyclase-inhibiting adrenergic receptor signaling pathway GO:0098664P:G protein-coupled serotonin receptor signaling pathway GO:0004938F:alpha2-adrenergic receptor activity GO:0004993F:G protein-coupled serotonin receptor activity GO:0005886C:plasma membrane GO:0045202C:synapse |
- |
| 12371 |
SRR941867_primary_scf7180002152687_234-2423
Len: 2,189 bp
E-val: 1.7E-33
|
KTG42032.1hypothetical protein cypCar_00021757
dihydroorotate dehydrogenase (quinone)
|
GO:0006207P:'de novo' pyrimidine nucleobase biosynthetic process GO:0044205P:'de novo' UMP biosynthetic process GO:0106430F:dihydroorotate dehydrogenase (quinone) activity GO:0005743C:mitochondrial inner membrane |
EC:EC:1.3.5.2 |
| 12372 |
SRR941867_primary_scf7180002152688_1-3142
Len: 3,141 bp
E-val: 2.9E-34
|
XP_016109037.1PREDICTED: neuropathy target esterase isoform X1
lysophospholipase
|
GO:0016042P:lipid catabolic process GO:0046470P:phosphatidylcholine metabolic process GO:0004622F:phosphatidylcholine lysophospholipase activity GO:0005789C:endoplasmic reticulum membrane |
EC:EC:3.1.1.5 |
| 12373 |
SRR941867_primary_scf7180002152693_1-1492
Len: 1,491 bp
E-val: 2.6E-174
|
KTF89177.1hypothetical protein cypCar_00008158, partial
|
GO:0001570P:vasculogenesis GO:0001839P:neural plate morphogenesis GO:0001947P:heart looping GO:0003231P:cardiac ventricle development GO:0009880P:embryonic pattern specification GO:0009952P:anterior/posterior pattern specification GO:0010002P:cardioblast differentiation GO:0014003P:oligodendrocyte development GO:0014033P:neural crest cell differentiation GO:0021508P:floor plate formation GO:0021520P:spinal cord motor neuron cell fate specification GO:0021523P:somatic motor neuron differentiation GO:0021537P:telencephalon development GO:0021587P:cerebellum morphogenesis GO:0021798P:forebrain dorsal/ventral pattern formation GO:0021984P:adenohypophysis development GO:0021986P:habenula development GO:0030239P:myofibril assembly GO:0031017P:exocrine pancreas development GO:0031018P:endocrine pancreas development GO:0031076P:embryonic camera-type eye development GO:0031290P:retinal ganglion cell axon guidance GO:0032474P:otolith morphogenesis GO:0035143P:caudal fin morphogenesis GO:0035479P:angioblast cell migration from lateral mesoderm to midline GO:0035912P:dorsal aorta morphogenesis GO:0042693P:muscle cell fate commitment GO:0043113P:receptor clustering GO:0045880P:positive regulation of smoothened signaling pathway GO:0048557P:embryonic digestive tract morphogenesis GO:0048702P:embryonic neurocranium morphogenesis GO:0048703P:embryonic viscerocranium morphogenesis GO:0048741P:skeletal muscle fiber development GO:0048745P:smooth muscle tissue development GO:0048752P:semicircular canal morphogenesis GO:0048795P:swim bladder morphogenesis GO:0051216P:cartilage development GO:0060041P:retina development in camera-type eye GO:0060844P:arterial endothelial cell fate commitment GO:0060896P:neural plate pattern specification GO:0060956P:endocardial cell differentiation GO:0061053P:somite development GO:0071679P:commissural neuron axon guidance GO:0072175P:epithelial tube formation GO:0005515F:protein binding GO:0008142F:oxysterol binding GO:0005929C:cilium GO:0016020C:membrane |
- |
| 12374 |
SRR941867_primary_scf7180002152700_1-2643
Len: 2,642 bp
E-val: 0.0
|
KTF92485.1hypothetical protein cypCar_00030390
methylcytosine dioxygenase; DNA oxidative demethylase
|
GO:0002244P:hematopoietic progenitor cell differentiation GO:0007219P:Notch signaling pathway GO:0016055P:Wnt signaling pathway GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0060319P:primitive erythrocyte differentiation GO:0071425P:hematopoietic stem cell proliferation GO:0098508P:endothelial to hematopoietic transition GO:0141167P:chromosomal 5-methylcytosine DNA demethylation, oxidation pathway GO:0008270F:zinc ion binding GO:0035516F:broad specificity oxidative DNA demethylase activity GO:0070579F:DNA 5-methylcytosine dioxygenase activity GO:0005634C:nucleus GO:0005694C:chromosome |
EC:EC:1.14.11.80 EC:EC:1.14.11.33 |
| 12375 |
SRR941867_primary_scf7180002152702_312-1557
Len: 1,245 bp
E-val: 2.3E-30
|
KTF75723.1hypothetical protein cypCar_00039874, partial
diacylglycerol kinase (ATP)
|
GO:0007200P:phospholipase C-activating G protein-coupled receptor signaling pathway GO:0046486P:glycerolipid metabolic process GO:0004143F:ATP-dependent diacylglycerol kinase activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0005886C:plasma membrane |
EC:EC:2.7.1.107 |