Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 13476 |
SRR941867_primary_scf7180002181883_1-608
Len: 607 bp
E-val: 2.2E-39
|
XP_018959437.1PREDICTED: epidermal growth factor receptor substrate 15-like
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0006457P:protein folding GO:0006897P:endocytosis GO:0016197P:endosomal transport GO:0033077P:T cell differentiation in thymus GO:0036503P:ERAD pathway GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003677F:DNA binding GO:0005509F:calcium ion binding GO:0045296F:cadherin binding GO:0051082F:unfolded protein binding GO:0005634C:nucleus GO:0005789C:endoplasmic reticulum membrane GO:0030132C:clathrin coat of coated pit |
- |
| 13477 |
SRR941867_primary_scf7180002181911_1-1585
Len: 1,584 bp
E-val: 5.8E-23
|
XP_026135202.1sodium bicarbonate transporter-like protein 11
|
GO:0006810P:transport |
- |
| 13478 |
SRR941867_primary_scf7180002181944_1-1563
Len: 1,562 bp
E-val: 1.7E-35
|
RXN07093.1disco-interacting 2 -like protein
|
GO:0009986C:cell surface |
- |
| 13479 |
SRR941867_primary_scf7180002181948_1-1219
Len: 1,218 bp
E-val: 3.1E-16
|
KTG47217.1hypothetical protein cypCar_00045076
|
GO:0005739C:mitochondrion GO:0016020C:membrane |
- |
| 13480 |
SRR941867_primary_scf7180002181971_1-1171
Len: 1,170 bp
E-val: 2.7E-41
|
XP_016422079.1PREDICTED: ATP-dependent RNA helicase DDX19B-like, partial
|
GO:0005488F:binding |
- |
| 13481 |
SRR941867_primary_scf7180002181972_1-1169
Len: 1,168 bp
E-val: 2.6E-36
|
KTG37522.1hypothetical protein cypCar_00018483
|
GO:0009653P:anatomical structure morphogenesis GO:0045216P:cell-cell junction organization GO:0098609P:cell-cell adhesion GO:0005515F:protein binding GO:0046872F:metal ion binding GO:0005886C:plasma membrane |
- |
| 13482 |
SRR941867_primary_scf7180002182145_1-1260
Len: 1,259 bp
E-val: 1.8E-51
|
KTG45343.1hypothetical protein cypCar_00002202, partial
|
GO:0043229C:intracellular organelle |
- |
| 13483 |
SRR941867_primary_scf7180002182166_1-789
Len: 788 bp
E-val: 2.4E-78
|
KTG42504.1hypothetical protein cypCar_00013294
|
GO:0006508P:proteolysis GO:0003779F:actin binding GO:0004198F:calcium-dependent cysteine-type endopeptidase activity GO:0005509F:calcium ion binding GO:0008234F:cysteine-type peptidase activity GO:0046872F:metal ion binding GO:0005737C:cytoplasm |
- |
| 13484 |
SRR941867_primary_scf7180002182259_1-473
Len: 472 bp
E-val: 2.7E-32
|
KTG36358.1hypothetical protein cypCar_00019148, partial
|
GO:0001525P:angiogenesis GO:0007166P:cell surface receptor signaling pathway GO:0007189P:adenylate cyclase-activating G protein-coupled receptor signaling pathway GO:0001605F:adrenomedullin receptor activity GO:0001635F:calcitonin gene-related peptide receptor activity GO:0004948F:calcitonin receptor activity GO:0005886C:plasma membrane |
- |
| 13485 |
SRR941867_primary_scf7180002182281_1-1509
Len: 1,508 bp
E-val: 6.7E-61
|
KTF81697.1hypothetical protein cypCar_00038557, partial
double-stranded RNA adenine deaminase
|
GO:0006382P:adenosine to inosine editing GO:0006396P:RNA processing GO:0003725F:double-stranded RNA binding GO:0003726F:double-stranded RNA adenosine deaminase activity GO:0008251F:tRNA-specific adenosine deaminase activity GO:0005730C:nucleolus GO:0005737C:cytoplasm |
EC:EC:3.5.4.37 |
| 13486 |
SRR941867_primary_scf7180002182305_1-994
Len: 993 bp
E-val: 7.1E-27
|
KTG34365.1hypothetical protein cypCar_00012399
Isomerases altering macromolecular conformation
|
GO:0043009P:chordate embryonic development GO:2000623P:negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0003723F:RNA binding GO:0004386F:helicase activity GO:0005524F:ATP binding |
EC:EC:5.6.2 |
| 13487 |
SRR941867_primary_scf7180002182312_64-997
Len: 933 bp
E-val: 5.8E-23
|
KTF88694.1hypothetical protein cypCar_00013265
|
GO:0006941P:striated muscle contraction GO:0007224P:smoothened signaling pathway GO:0014808P:release of sequestered calcium ion into cytosol by sarcoplasmic reticulum GO:0019722P:calcium-mediated signaling GO:0021532P:neural tube patterning GO:0048484P:enteric nervous system development GO:0048741P:skeletal muscle fiber development GO:1990791P:dorsal root ganglion development GO:0005219F:ryanodine-sensitive calcium-release channel activity GO:0005509F:calcium ion binding GO:0005515F:protein binding GO:0005790C:smooth endoplasmic reticulum GO:0030018C:Z disc GO:0033017C:sarcoplasmic reticulum membrane GO:0034704C:calcium channel complex GO:0042383C:sarcolemma |
- |
| 13488 |
SRR941867_primary_scf7180002182339_285-1348
Len: 1,063 bp
E-val: 5.8E-35
|
KTG40444.1hypothetical protein cypCar_00006976, partial
|
GO:0005794C:Golgi apparatus GO:0016020C:membrane |
- |
| 13489 |
SRR941867_primary_scf7180002182390_1-1703
Len: 1,702 bp
E-val: 2.7E-58
|
RXN07098.1ubiquitin carboxyl-terminal hydrolase 37 isoform X1
Acting on peptide bonds (peptidases); ubiquitinyl hydrolase 1
|
GO:0000082P:G1/S transition of mitotic cell cycle GO:0006508P:proteolysis GO:0021551P:central nervous system morphogenesis GO:0031647P:regulation of protein stability GO:0035871P:protein K11-linked deubiquitination GO:0051301P:cell division GO:0071108P:protein K48-linked deubiquitination GO:1904888P:cranial skeletal system development GO:0004197F:cysteine-type endopeptidase activity GO:0004843F:cysteine-type deubiquitinase activity GO:0005634C:nucleus GO:0005829C:cytosol |
EC:EC:3.4.22 EC:EC:3.4.19.12 |
| 13490 |
SRR941867_primary_scf7180002182398_1-813
Len: 812 bp
E-val: 1.5E-88
|
KTF84676.1hypothetical protein cypCar_00037147
|
GO:0006954P:inflammatory response GO:0007160P:cell-matrix adhesion GO:0030246F:carbohydrate binding GO:0016020C:membrane |
- |
| 13491 |
SRR941867_primary_scf7180002182420_93-1244
Len: 1,151 bp
E-val: 5.6E-60
|
XP_018939566.1PREDICTED: granzyme-like protein 1
Acting on peptide bonds (peptidases)
|
GO:0008236F:serine-type peptidase activity |
EC:EC:3.4 |
| 13492 |
SRR941867_primary_scf7180002182471_1-1781
Len: 1,780 bp
E-val: 7.5E-19
|
KTG02550.1hypothetical protein cypCar_00015613
polypeptide N-acetylgalactosaminyltransferase
|
GO:0006493P:protein O-linked glycosylation GO:0004653F:polypeptide N-acetylgalactosaminyltransferase activity GO:0030246F:carbohydrate binding GO:0000139C:Golgi membrane |
EC:EC:2.4.1.41 |
| 13493 |
SRR941867_primary_scf7180002182472_754-1074
Len: 320 bp
E-val: 2.3E-27
|
XP_018926538.1PREDICTED: calcium-dependent secretion activator 1-like isoform X1
|
GO:0015031P:protein transport GO:0016079P:synaptic vesicle exocytosis GO:0045921P:positive regulation of exocytosis GO:1990504P:dense core granule exocytosis GO:0008289F:lipid binding GO:0030659C:cytoplasmic vesicle membrane GO:0098793C:presynapse GO:0098978C:glutamatergic synapse |
- |
| 13494 |
SRR941867_primary_scf7180002182484_1-1692
Len: 1,691 bp
E-val: 2.8E-201
|
XP_018931594.1PREDICTED: LOW QUALITY PROTEIN: neuronal acetylcholine receptor subunit alpha-3-like
|
GO:0007271P:synaptic transmission, cholinergic GO:0007274P:neuromuscular synaptic transmission GO:0034220P:monoatomic ion transmembrane transport GO:0035094P:response to nicotine GO:0051899P:membrane depolarization GO:0060079P:excitatory postsynaptic potential GO:0095500P:acetylcholine receptor signaling pathway GO:0015464F:acetylcholine receptor activity GO:0022848F:acetylcholine-gated monoatomic cation-selective channel activity GO:0005892C:acetylcholine-gated channel complex GO:0043005C:neuron projection GO:0045211C:postsynaptic membrane |
- |
| 13495 |
SRR941867_primary_scf7180002182546_302-1249
Len: 947 bp
E-val: 2.2E-30
|
XP_018926275.1PREDICTED: methyltransferase-like protein 2-A
Transferring one-carbon groups
|
GO:0030488P:tRNA methylation GO:0052735F:tRNA (cytidine-3-)-methyltransferase activity GO:0005737C:cytoplasm |
EC:EC:2.1.1 |
| 13496 |
SRR941867_primary_scf7180002182551_1-1965
Len: 1,964 bp
E-val: 8.2E-35
|
XP_018955374.1PREDICTED: nuclear receptor subfamily 5 group A member 2-like
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009755P:hormone-mediated signaling pathway GO:0030522P:intracellular receptor signaling pathway GO:0031017P:exocrine pancreas development GO:0035019P:somatic stem cell population maintenance GO:0048565P:digestive tract development GO:0051216P:cartilage development GO:0061017P:hepatoblast differentiation GO:2001051P:positive regulation of tendon cell differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0004879F:nuclear receptor activity GO:0005515F:protein binding GO:0008270F:zinc ion binding GO:0090575C:RNA polymerase II transcription regulator complex |
- |
| 13497 |
SRR941867_primary_scf7180002182651_1-1613
Len: 1,612 bp
E-val: 8.5E-46
|
XP_026103957.1cleavage stimulation factor subunit 2-like isoform X2
|
GO:0003729F:mRNA binding GO:0005847C:mRNA cleavage and polyadenylation specificity factor complex |
- |
| 13498 |
SRR941867_primary_scf7180002182662_1-1233
Len: 1,232 bp
E-val: 8.2E-49
|
CAF92690.1unnamed protein product, partial
|
GO:0006182P:cGMP biosynthetic process GO:0009190P:cyclic nucleotide biosynthetic process GO:0035556P:intracellular signal transduction GO:0004383F:guanylate cyclase activity GO:0004672F:protein kinase activity GO:0005524F:ATP binding GO:0016829F:lyase activity GO:0016849F:phosphorus-oxygen lyase activity GO:0005737C:cytoplasm GO:0016020C:membrane |
- |
| 13499 |
SRR941867_primary_scf7180002182697_644-1694
Len: 1,050 bp
E-val: 4.7E-21
|
XP_018952493.1PREDICTED: serologically defined colon cancer antigen 8 homolog
|
GO:0001764P:neuron migration GO:0007098P:centrosome cycle GO:0030010P:establishment of cell polarity GO:0035148P:tube formation GO:0005813C:centrosome GO:0005814C:centriole |
- |
| 13500 |
SRR941867_primary_scf7180002182719_1-1339
Len: 1,338 bp
E-val: 9.7E-96
|
RXN10421.1nuclease HARBI1
Hydrolases
|
GO:0003676F:nucleic acid binding GO:0004518F:nuclease activity GO:0016787F:hydrolase activity GO:0046872F:metal ion binding GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
EC:EC:3 |