Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 14376 |
SRR941867_primary_scf7180002318163_1-2221
Len: 2,220 bp
E-val: 4.3E-48
|
XP_014031517.1PREDICTED: zinc finger protein 143-like
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0006606P:protein import into nucleus GO:0045893P:positive regulation of DNA-templated transcription GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0031267F:small GTPase binding GO:0000785C:chromatin GO:0005635C:nuclear envelope GO:0005667C:transcription regulator complex GO:0005829C:cytosol GO:0031519C:PcG protein complex |
- |
| 14377 |
SRR941867_primary_scf7180002318165_1-2393
Len: 2,392 bp
E-val: 1.7E-122
|
XP_016142315.1PREDICTED: stAR-related lipid transfer protein 13-like isoform X1
|
GO:0007165P:signal transduction GO:0030036P:actin cytoskeleton organization GO:0035023P:regulation of Rho protein signal transduction GO:0005096F:GTPase activator activity GO:0008289F:lipid binding GO:0016020C:membrane |
- |
| 14378 |
SRR941867_primary_scf7180002318183_1-1487
Len: 1,486 bp
E-val: 9.6E-36
|
KTG35368.1hypothetical protein cypCar_00015610
|
GO:0007155P:cell adhesion GO:0046872F:metal ion binding GO:0005576C:extracellular region GO:0031012C:extracellular matrix |
- |
| 14379 |
SRR941867_primary_scf7180002318195_1-1329
Len: 1,328 bp
E-val: 2.2E-23
|
NP_956915.1poly(A) polymerase gamma
polynucleotide adenylyltransferase
|
GO:0006397P:mRNA processing GO:0006954P:inflammatory response GO:0007249P:canonical NF-kappaB signal transduction GO:0007399P:nervous system development GO:0009653P:anatomical structure morphogenesis GO:0031123P:RNA 3'-end processing GO:0033554P:cellular response to stress GO:0034097P:response to cytokine GO:0038061P:non-canonical NF-kappaB signal transduction GO:0045087P:innate immune response GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0060429P:epithelium development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003723F:RNA binding GO:0005524F:ATP binding GO:1990817F:poly(A) RNA polymerase activity GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0016020C:membrane |
EC:EC:2.7.7.19 |
| 14380 |
SRR941867_primary_scf7180002318215_1315-2268
Len: 953 bp
E-val: 2.0E-180
|
KTG03147.1hypothetical protein cypCar_00008698, partial
|
GO:0007196P:adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway GO:0051966P:regulation of synaptic transmission, glutamatergic GO:0001642F:group III metabotropic glutamate receptor activity GO:0005886C:plasma membrane |
- |
| 14381 |
SRR941867_primary_scf7180002318222_441-2370
Len: 1,929 bp
E-val: 3.6E-43
|
XP_016125710.1PREDICTED: E3 ubiquitin-protein ligase arih1-like
Ligases; Acyltransferases
|
GO:0006511P:ubiquitin-dependent protein catabolic process GO:0016567P:protein ubiquitination GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0031624F:ubiquitin conjugating enzyme binding GO:0061630F:ubiquitin protein ligase activity GO:0005737C:cytoplasm GO:0016604C:nuclear body GO:0019005C:SCF ubiquitin ligase complex GO:0031462C:Cul2-RING ubiquitin ligase complex GO:0031463C:Cul3-RING ubiquitin ligase complex GO:0031464C:Cul4A-RING E3 ubiquitin ligase complex GO:0097413C:Lewy body |
EC:EC:6 EC:EC:2.3.2 |
| 14382 |
SRR941867_primary_scf7180002318234_1784-2458
Len: 674 bp
E-val: 4.3E-76
|
XP_016407389.1PREDICTED: voltage-dependent N-type calcium channel subunit alpha-1B-like
|
GO:0007268P:chemical synaptic transmission GO:0098703P:calcium ion import across plasma membrane GO:0005509F:calcium ion binding GO:0008331F:high voltage-gated calcium channel activity GO:0005891C:voltage-gated calcium channel complex GO:0043025C:neuronal cell body GO:0045202C:synapse |
- |
| 14383 |
SRR941867_primary_scf7180002318243_574-1305
Len: 731 bp
E-val: 2.1E-121
|
XP_018943721.1PREDICTED: claudin-20-like
|
GO:0007155P:cell adhesion GO:0070830P:bicellular tight junction assembly GO:0005198F:structural molecule activity GO:0005886C:plasma membrane GO:0005923C:bicellular tight junction |
- |
| 14384 |
SRR941867_primary_scf7180002318251_1-2248
Len: 2,247 bp
E-val: 1.3E-71
|
KTG32475.1hypothetical protein cypCar_00022833
|
GO:0000722P:telomere maintenance via recombination GO:0006278P:RNA-templated DNA biosynthetic process GO:0003720F:telomerase activity GO:0003723F:RNA binding GO:0070034F:telomerase RNA binding GO:0005697C:telomerase holoenzyme complex |
- |
| 14385 |
SRR941867_primary_scf7180002318288_1-2120
Len: 2,119 bp
E-val: 3.0E-43
|
XP_026103664.1long-chain fatty acid transport protein 1-like
|
GO:0001579P:medium-chain fatty acid transport GO:0001676P:long-chain fatty acid metabolic process GO:0006631P:fatty acid metabolic process GO:0006869P:lipid transport GO:0007166P:cell surface receptor signaling pathway GO:0007186P:G protein-coupled receptor signaling pathway GO:0044539P:long-chain fatty acid import into cell GO:0004930F:G protein-coupled receptor activity GO:0005324F:long-chain fatty acid transmembrane transporter activity GO:0005509F:calcium ion binding GO:0016874F:ligase activity GO:0090434F:oleoyl-CoA ligase activity GO:0005743C:mitochondrial inner membrane GO:0005789C:endoplasmic reticulum membrane GO:0005886C:plasma membrane GO:0016020C:membrane |
- |
| 14386 |
SRR941867_primary_scf7180002318291_1-1202
Len: 1,201 bp
E-val: 4.1E-29
|
KTF76706.1hypothetical protein cypCar_00010423
|
GO:0007264P:small GTPase-mediated signal transduction GO:0007265P:Ras protein signal transduction GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005886C:plasma membrane |
- |
| 14387 |
SRR941867_primary_scf7180002318326_1-1437
Len: 1,436 bp
E-val: 1.1E-225
|
KTF71076.1hypothetical protein cypCar_00047360
chondroitin 6-sulfotransferase
|
GO:0005975P:carbohydrate metabolic process GO:0006044P:N-acetylglucosamine metabolic process GO:0001517F:N-acetylglucosamine 6-O-sulfotransferase activity GO:0008459F:chondroitin 6-sulfotransferase activity GO:0000139C:Golgi membrane |
EC:EC:2.8.2.17 |
| 14388 |
SRR941867_primary_scf7180002318366_431-2026
Len: 1,595 bp
E-val: 3.2E-279
|
KTG33997.1hypothetical protein cypCar_00013432, partial
methylcytosine dioxygenase
|
GO:0007219P:Notch signaling pathway GO:0016055P:Wnt signaling pathway GO:0030097P:hemopoiesis GO:0032656P:regulation of interleukin-13 production GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0071222P:cellular response to lipopolysaccharide GO:0098508P:endothelial to hematopoietic transition GO:0141167P:chromosomal 5-methylcytosine DNA demethylation, oxidation pathway GO:0003677F:DNA binding GO:0008270F:zinc ion binding GO:0070579F:DNA 5-methylcytosine dioxygenase activity GO:0005634C:nucleus GO:0005694C:chromosome |
EC:EC:1.14.11.80 |
| 14389 |
SRR941867_primary_scf7180002318378_990-2192
Len: 1,202 bp
E-val: 4.0E-210
|
KTG31988.1hypothetical protein cypCar_00011092, partial
|
GO:0051262P:protein tetramerization GO:0070588P:calcium ion transmembrane transport GO:0005262F:calcium channel activity GO:0005886C:plasma membrane |
- |
| 14390 |
SRR941867_primary_scf7180002318399_441-2451
Len: 2,010 bp
E-val: 2.3E-32
|
XP_018926018.1PREDICTED: MAP kinase-interacting serine/threonine-protein kinase 2-like
calcium/calmodulin-dependent protein kinase
|
GO:0035556P:intracellular signal transduction GO:0004683F:calcium/calmodulin-dependent protein kinase activity GO:0005516F:calmodulin binding GO:0005524F:ATP binding GO:0009931F:calcium-dependent protein serine/threonine kinase activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
EC:EC:2.7.11.17 |
| 14391 |
SRR941867_primary_scf7180002318401_1-2334
Len: 2,333 bp
E-val: 3.8E-31
|
XP_018922250.1PREDICTED: LOW QUALITY PROTEIN: T-lymphoma invasion and metastasis-inducing protein 2-like
|
GO:0007264P:small GTPase-mediated signal transduction GO:0005085F:guanyl-nucleotide exchange factor activity GO:0030695F:GTPase regulator activity |
- |
| 14392 |
SRR941867_primary_scf7180002318426_252-1673
Len: 1,421 bp
E-val: 7.9E-88
|
XP_018977919.1PREDICTED: UPF0606 protein KIAA1549-like isoform X2
|
GO:0016020C:membrane |
- |
| 14393 |
SRR941867_primary_scf7180002318427_1-1263
Len: 1,262 bp
E-val: 5.8E-191
|
XP_018923164.1PREDICTED: cas scaffolding protein family member 4 isoform X1
|
GO:0007155P:cell adhesion GO:0007169P:cell surface receptor protein tyrosine kinase signaling pathway GO:0016477P:cell migration GO:0005737C:cytoplasm GO:0005886C:plasma membrane GO:0005925C:focal adhesion |
- |
| 14394 |
SRR941867_primary_scf7180002318437_1-1477
Len: 1,476 bp
E-val: 9.9E-17
|
XP_016137342.1PREDICTED: cohesin subunit SA-2-like
|
GO:0007059P:chromosome segregation GO:0007062P:sister chromatid cohesion GO:0051301P:cell division GO:0003682F:chromatin binding GO:0000775C:chromosome, centromeric region GO:0000785C:chromatin GO:0005634C:nucleus GO:0008278C:cohesin complex |
- |
| 14395 |
SRR941867_primary_scf7180002318441_1735-2061
Len: 326 bp
E-val: 8.7E-51
|
KTF73509.1hypothetical protein cypCar_00045808, partial
receptor protein-tyrosine kinase
|
GO:0001525P:angiogenesis GO:0001570P:vasculogenesis GO:0001755P:neural crest cell migration GO:0007413P:axonal fasciculation GO:0030947P:regulation of vascular endothelial growth factor receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0071526P:semaphorin-plexin signaling pathway GO:0071678P:olfactory bulb axon guidance GO:0005021F:vascular endothelial growth factor receptor activity GO:0008201F:heparin binding GO:0017154F:semaphorin receptor activity GO:0046872F:metal ion binding GO:0030424C:axon GO:0045211C:postsynaptic membrane GO:0098978C:glutamatergic synapse |
EC:EC:2.7.10.1 |
| 14396 |
SRR941867_primary_scf7180002318455_254-1761
Len: 1,507 bp
E-val: 1.6E-67
|
XP_018926500.1PREDICTED: LOW QUALITY PROTEIN: fibrinogen gamma chain-like
|
GO:0007596P:blood coagulation GO:0009987P:cellular process |
- |
| 14397 |
SRR941867_primary_scf7180002318464_118-3060
Len: 2,942 bp
E-val: 1.6E-18
|
XP_026108386.1pinin-like
|
GO:0000387P:spliceosomal snRNP assembly GO:0014033P:neural crest cell differentiation GO:0003677F:DNA binding GO:0016607C:nuclear speck GO:0030057C:desmosome GO:0071013C:catalytic step 2 spliceosome |
- |
| 14398 |
SRR941867_primary_scf7180002318491_1-2025
Len: 2,024 bp
E-val: 1.6E-65
|
KTF81635.1hypothetical protein cypCar_00016543
|
GO:0015740P:C4-dicarboxylate transport GO:0055085P:transmembrane transport GO:0022857F:transmembrane transporter activity GO:0110165C:cellular anatomical structure |
- |
| 14399 |
SRR941867_primary_scf7180002318552_1491-2066
Len: 575 bp
E-val: 6.4E-81
|
KTG06624.1hypothetical protein cypCar_00019726
nucleoside-triphosphate phosphatase
|
GO:0007266P:Rho protein signal transduction GO:0008361P:regulation of cell size GO:0050770P:regulation of axonogenesis GO:0003924F:GTPase activity GO:0005096F:GTPase activator activity GO:0005525F:GTP binding GO:0008289F:lipid binding GO:0005634C:nucleus GO:0005829C:cytosol GO:0005856C:cytoskeleton GO:0005886C:plasma membrane GO:0042995C:cell projection |
EC:EC:3.6.1.15 |
| 14400 |
SRR941867_primary_scf7180002318557_1-1723
Len: 1,722 bp
E-val: 8.5E-44
|
KTG05109.1hypothetical protein cypCar_00003129
|
GO:0007264P:small GTPase-mediated signal transduction GO:0007411P:axon guidance GO:0009887P:animal organ morphogenesis GO:0009888P:tissue development GO:0016477P:cell migration GO:0034446P:substrate adhesion-dependent cell spreading GO:0048514P:blood vessel morphogenesis GO:0051491P:positive regulation of filopodium assembly GO:0070831P:basement membrane assembly GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005576C:extracellular region GO:0043256C:laminin complex |
- |