Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 17351 |
SRR953582_primary_scf7180001897476_3685-6287
Len: 2,602 bp
E-val: 1.9E-18
|
XP_016136264.1PREDICTED: battenin-like isoform X1
ribose-phosphate diphosphokinase
|
GO:0006015P:5-phosphoribose 1-diphosphate biosynthetic process GO:0006164P:purine nucleotide biosynthetic process GO:0007040P:lysosome organization GO:0007409P:axonogenesis GO:0043524P:negative regulation of neuron apoptotic process GO:0051453P:regulation of intracellular pH GO:0000287F:magnesium ion binding GO:0004749F:ribose phosphate diphosphokinase activity GO:0005524F:ATP binding GO:0002189C:ribose phosphate diphosphokinase complex GO:0005765C:lysosomal membrane GO:0012505C:endomembrane system |
EC:EC:2.7.6.1 |
| 17352 |
SRR953582_primary_scf7180001897477_761-4082
Len: 3,321 bp
E-val: 4.7E-83
|
KTG41598.1hypothetical protein cypCar_00025552
|
GO:0071356P:cellular response to tumor necrosis factor GO:0051059F:NF-kappaB binding GO:0005829C:cytosol |
- |
| 17353 |
SRR953582_primary_scf7180001897479_1-7003
Len: 7,002 bp
E-val: 2.4E-89
|
XP_018968132.1PREDICTED: exportin-2
|
GO:0110165C:cellular anatomical structure |
- |
| 17354 |
SRR953582_primary_scf7180001897486_1744-2091
Len: 347 bp
E-val: 4.1E-46
|
RXN15134.1LRR and PYD domains-containing 3-like protein
|
GO:0006355P:regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
- |
| 17355 |
SRR953582_primary_scf7180001897506_2426-8458
Len: 6,032 bp
E-val: 1.9E-42
|
KTF80865.1hypothetical protein cypCar_00045834, partial
|
GO:0007265P:Ras protein signal transduction GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005886C:plasma membrane |
- |
| 17356 |
SRR953582_primary_scf7180001897508_1-6179
Len: 6,178 bp
E-val: 0.0
|
XP_018957117.1PREDICTED: LOW QUALITY PROTEIN: adenomatous polyposis coli protein 2
|
GO:0001708P:cell fate specification GO:0007026P:negative regulation of microtubule depolymerization GO:0007389P:pattern specification process GO:0007399P:nervous system development GO:0016477P:cell migration GO:0048513P:animal organ development GO:0090090P:negative regulation of canonical Wnt signaling pathway GO:0008013F:beta-catenin binding GO:0008017F:microtubule binding GO:0045295F:gamma-catenin binding GO:0005881C:cytoplasmic microtubule GO:0016342C:catenin complex GO:0030877C:beta-catenin destruction complex GO:0043231C:intracellular membrane-bounded organelle |
- |
| 17357 |
SRR953582_primary_scf7180001897524_3521-3781
Len: 260 bp
E-val: 3.4E-37
|
XP_021438146.1mothers against decapentaplegic homolog 4-like
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009653P:anatomical structure morphogenesis GO:0030154P:cell differentiation GO:0030509P:BMP signaling pathway GO:0060395P:SMAD protein signal transduction GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0046872F:metal ion binding GO:0070411F:I-SMAD binding GO:0005737C:cytoplasm GO:0071144C:heteromeric SMAD protein complex |
- |
| 17358 |
SRR953582_primary_scf7180001897526_1443-6648
Len: 5,205 bp
E-val: 7.0E-17
|
RXN20751.1parkin coregulated gene protein
|
GO:0007368P:determination of left/right symmetry GO:0030544F:Hsp70 protein binding GO:0051879F:Hsp90 protein binding GO:0005829C:cytosol GO:0031982C:vesicle GO:0043005C:neuron projection |
- |
| 17359 |
SRR953582_primary_scf7180001897530_1126-1779
Len: 653 bp
E-val: 3.0E-119
|
XP_018982104.1PREDICTED: claudin-9-like
|
GO:0007155P:cell adhesion GO:0070830P:bicellular tight junction assembly GO:0005198F:structural molecule activity GO:0005886C:plasma membrane GO:0005923C:bicellular tight junction |
- |
| 17360 |
SRR953582_primary_scf7180001897530_3577-4221
Len: 644 bp
E-val: 1.0E-98
|
XP_016412956.1PREDICTED: claudin-4-like
|
GO:0005198F:structural molecule activity GO:0005886C:plasma membrane GO:0005923C:bicellular tight junction |
- |
| 17361 |
SRR953582_primary_scf7180001897531_1449-5018
Len: 3,569 bp
E-val: 0.0
|
XP_018979814.1PREDICTED: protein capicua homolog isoform X1
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
- |
| 17362 |
SRR953582_primary_scf7180001897541_368-4412
Len: 4,044 bp
E-val: 9.2E-283
|
KTG33390.1hypothetical protein cypCar_00027343, partial
|
GO:0031124P:mRNA 3'-end processing GO:0000993F:RNA polymerase II complex binding |
- |
| 17363 |
SRR953582_primary_scf7180001897548_2527-6343
Len: 3,816 bp
E-val: 5.3E-54
|
NP_001073498.1arrestin domain-containing protein 3
|
GO:0015031P:protein transport GO:0005737C:cytoplasm GO:0043231C:intracellular membrane-bounded organelle |
- |
| 17364 |
SRR953582_primary_scf7180001897554_3774-6399
Len: 2,625 bp
E-val: 4.9E-27
|
KTG46910.1hypothetical protein cypCar_00041360
receptor protein-tyrosine kinase
|
GO:0001570P:vasculogenesis GO:0001666P:response to hypoxia GO:0001755P:neural crest cell migration GO:0007411P:axon guidance GO:0009611P:response to wounding GO:0030947P:regulation of vascular endothelial growth factor receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0051491P:positive regulation of filopodium assembly GO:0061300P:cerebellum vasculature development GO:0071526P:semaphorin-plexin signaling pathway GO:0090050P:positive regulation of cell migration involved in sprouting angiogenesis GO:0005021F:vascular endothelial growth factor receptor activity GO:0008201F:heparin binding GO:0017154F:semaphorin receptor activity GO:0038085F:vascular endothelial growth factor binding GO:0046872F:metal ion binding GO:0005886C:plasma membrane GO:0005925C:focal adhesion GO:0030424C:axon |
EC:EC:2.7.10.1 |
| 17365 |
SRR953582_primary_scf7180001897560_2225-6462
Len: 4,237 bp
E-val: 0.0
|
XP_016091778.1PREDICTED: teashirt homolog 3-like
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003677F:DNA binding GO:0008270F:zinc ion binding GO:0005634C:nucleus |
- |
| 17366 |
SRR953582_primary_scf7180001897576_412-3186
Len: 2,774 bp
E-val: 7.3E-21
|
XP_006520666.1PREDICTED: PRKCA-binding protein isoform X1
|
GO:0005622C:intracellular anatomical structure |
- |
| 17367 |
SRR953582_primary_scf7180001897579_1-6503
Len: 6,502 bp
E-val: 5.7E-32
|
KTG42156.1hypothetical protein cypCar_00006162
|
GO:0042981P:regulation of apoptotic process GO:0045216P:cell-cell junction organization GO:0090557P:establishment of endothelial intestinal barrier GO:0098609P:cell-cell adhesion GO:0150105P:protein localization to cell-cell junction GO:1905605P:positive regulation of blood-brain barrier permeability GO:0050839F:cell adhesion molecule binding GO:0005886C:plasma membrane GO:0005923C:bicellular tight junction |
- |
| 17368 |
SRR953582_primary_scf7180001897598_1351-2067
Len: 716 bp
E-val: 1.5E-34
|
XP_018924331.1PREDICTED: uncharacterized protein LOC109051228, partial
|
GO:0043170P:macromolecule metabolic process GO:0044238P:primary metabolic process GO:0005488F:binding GO:0005622C:intracellular anatomical structure |
- |
| 17369 |
SRR953582_primary_scf7180001897598_2761-3089
Len: 328 bp
E-val: 2.7E-7
|
ROL46838.1hypothetical protein DPX16_20490
|
-
|
- |
| 17370 |
SRR953582_primary_scf7180001897599_1-2938
Len: 2,937 bp
E-val: 3.1E-38
|
XP_018929591.1PREDICTED: LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 9-like
|
GO:0002040P:sprouting angiogenesis GO:0046847P:filopodium assembly GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005737C:cytoplasm GO:0014069C:postsynaptic density GO:0045202C:synapse |
- |
| 17371 |
SRR953582_primary_scf7180001897599_6424-6871
Len: 447 bp
E-val: 6.7E-17
|
KTG38256.1hypothetical protein cypCar_00034000
|
-
|
- |
| 17372 |
SRR953582_primary_scf7180001897603_2431-5793
Len: 3,362 bp
E-val: 4.4E-44
|
XP_016376726.1PREDICTED: putative nuclease HARBI1, partial
|
- | |
| 17373 |
SRR953582_primary_scf7180001897615_1573-6058
Len: 4,485 bp
E-val: 0.0
|
XP_018971466.1PREDICTED: dapper homolog 1-like
|
GO:0046329P:negative regulation of JNK cascade GO:0090090P:negative regulation of canonical Wnt signaling pathway GO:2000095P:regulation of Wnt signaling pathway, planar cell polarity pathway GO:0005737C:cytoplasm |
- |
| 17374 |
SRR953582_primary_scf7180001897623_1-4357
Len: 4,356 bp
E-val: 7.6E-49
|
KTG03207.1hypothetical protein cypCar_00036026, partial
|
GO:0048731P:system development GO:0005509F:calcium ion binding GO:0001527C:microfibril GO:0005576C:extracellular region GO:0031012C:extracellular matrix |
- |
| 17375 |
SRR953582_primary_scf7180001897628_4827-9840
Len: 5,013 bp
E-val: 1.5E-45
|
XP_018980443.1PREDICTED: cell adhesion molecule-related/down-regulated by oncogenes-like isoform X1
|
GO:0007399P:nervous system development GO:0045879P:negative regulation of smoothened signaling pathway GO:0098609P:cell-cell adhesion |
- |