Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 18126 |
SRR953582_primary_scf7180001910571_1-1345
Len: 1,344 bp
E-val: 1.1E-91
|
KTG41154.1hypothetical protein cypCar_00000016
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0060272P:embryonic skeletal joint morphogenesis GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005654C:nucleoplasm |
- |
| 18127 |
SRR953582_primary_scf7180001910648_1-988
Len: 987 bp
E-val: 3.3E-24
|
NP_001007777.1far upstream element-binding protein 3
|
GO:0006355P:regulation of DNA-templated transcription GO:0006357P:regulation of transcription by RNA polymerase II GO:0003723F:RNA binding GO:0003729F:mRNA binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
- |
| 18128 |
SRR953582_primary_scf7180001910649_1300-1764
Len: 464 bp
E-val: 3.0E-52
|
XP_018930491.1PREDICTED: protein-glutamine gamma-glutamyltransferase K-like
Acyltransferases
|
GO:0032501P:multicellular organismal process GO:0048856P:anatomical structure development GO:0016746F:acyltransferase activity |
EC:EC:2.3 |
| 18129 |
SRR953582_primary_scf7180001910654_245-1200
Len: 955 bp
E-val: 2.8E-182
|
XP_018936197.1PREDICTED: zinc finger MYM-type protein 2-like
Transferring phosphorus-containing groups; myosin ATPase
|
GO:0007605P:sensory perception of sound GO:0030832P:regulation of actin filament length GO:0048731P:system development GO:0051491P:positive regulation of filopodium assembly GO:0000146F:microfilament motor activity GO:0003779F:actin binding GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0001917C:photoreceptor inner segment GO:0005737C:cytoplasm GO:0016459C:myosin complex GO:0032426C:stereocilium tip GO:0032433C:filopodium tip |
EC:EC:2.7.11 EC:EC:5.6.1.8 |
| 18130 |
SRR953582_primary_scf7180001911068_312-1015
Len: 703 bp
E-val: 4.7E-17
|
XP_016324483.1PREDICTED: mediator of RNA polymerase II transcription subunit 1
|
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0097067P:cellular response to thyroid hormone stimulus GO:0003712F:transcription coregulator activity GO:0042809F:nuclear vitamin D receptor binding GO:0042974F:nuclear retinoic acid receptor binding GO:0046966F:nuclear thyroid hormone receptor binding GO:0016592C:mediator complex |
- |
| 18131 |
SRR953582_primary_scf7180001911091_120-921
Len: 801 bp
E-val: 9.6E-99
|
XP_016385341.1PREDICTED: uncharacterized protein LOC107721716 isoform X1
|
GO:0006954P:inflammatory response GO:0042981P:regulation of apoptotic process GO:0045087P:innate immune response GO:0061702C:canonical inflammasome complex |
- |
| 18132 |
SRR953582_primary_scf7180001911160_440-1469
Len: 1,029 bp
E-val: 2.9E-84
|
KTG41768.1hypothetical protein cypCar_00003559, partial
|
GO:0006508P:proteolysis GO:0004252F:serine-type endopeptidase activity GO:0008236F:serine-type peptidase activity |
- |
| 18133 |
SRR953582_primary_scf7180001911251_1-1676
Len: 1,675 bp
E-val: 2.3E-38
|
XP_016299607.1PREDICTED: leukotriene A-4 hydrolase-like isoform X1
|
GO:0006508P:proteolysis GO:0006954P:inflammatory response GO:0009617P:response to bacterium GO:0019370P:leukotriene biosynthetic process GO:0030593P:neutrophil chemotaxis GO:0043171P:peptide catabolic process GO:0055113P:epiboly involved in gastrulation with mouth forming second GO:0004177F:aminopeptidase activity GO:0004301F:epoxide hydrolase activity GO:0004463F:leukotriene-A4 hydrolase activity GO:0008237F:metallopeptidase activity GO:0008270F:zinc ion binding GO:0046872F:metal ion binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005829C:cytosol |
- |
| 18134 |
SRR953582_primary_scf7180001911273_1-1921
Len: 1,920 bp
E-val: 1.5E-28
|
KTG36971.1hypothetical protein cypCar_00040921, partial
|
- | |
| 18135 |
SRR953582_primary_scf7180001911343_233-2072
Len: 1,839 bp
E-val: 1.5E-25
|
XP_018959704.1PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 30-like
ubiquitinyl hydrolase 1
|
GO:0006508P:proteolysis GO:0016579P:protein deubiquitination GO:0004843F:cysteine-type deubiquitinase activity GO:0005634C:nucleus GO:0005829C:cytosol GO:0016020C:membrane |
EC:EC:3.4.19.12 |
| 18136 |
SRR953582_primary_scf7180001911433_1-1916
Len: 1,915 bp
E-val: 6.5E-45
|
XP_016150424.1PREDICTED: chloride transport protein 6-like
|
GO:0006821P:chloride transport GO:0055085P:transmembrane transport GO:0015108F:chloride transmembrane transporter activity GO:0016020C:membrane GO:0043231C:intracellular membrane-bounded organelle |
- |
| 18137 |
SRR953582_primary_scf7180001911485_1-513
Len: 512 bp
E-val: 2.5E-36
|
KTF88377.1hypothetical protein cypCar_00021346, partial
|
GO:0006355P:regulation of DNA-templated transcription GO:0003723F:RNA binding GO:0005622C:intracellular anatomical structure |
- |
| 18138 |
SRR953582_primary_scf7180001911579_1-1058
Len: 1,057 bp
E-val: 8.8E-92
|
KTF81013.1hypothetical protein cypCar_00049527
|
GO:0005525F:GTP binding |
- |
| 18139 |
SRR953582_primary_scf7180001911611_1-658
Len: 657 bp
E-val: 3.1E-55
|
XP_018934722.1PREDICTED: myelin-associated glycoprotein-like isoform X1
|
GO:0007155P:cell adhesion GO:0030246F:carbohydrate binding GO:0033691F:sialic acid binding GO:0005886C:plasma membrane |
- |
| 18140 |
SRR953582_primary_scf7180001911615_1-404
Len: 403 bp
E-val: 2.3E-32
|
XP_016097394.1PREDICTED: V-type proton ATPase 21 kDa proteolipid subunit-like
|
GO:0006811P:monoatomic ion transport GO:0016020C:membrane |
- |
| 18141 |
SRR953582_primary_scf7180001911641_652-936
Len: 284 bp
E-val: 2.1E-40
|
ROL44116.1Zinc finger BED domain-containing protein 1
|
GO:0046983F:protein dimerization activity |
- |
| 18142 |
SRR953582_primary_scf7180001911684_922-1674
Len: 752 bp
E-val: 1.8E-22
|
KTG41482.1hypothetical protein cypCar_00019736
|
GO:0007186P:G protein-coupled receptor signaling pathway GO:0001965F:G-protein alpha-subunit binding GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005737C:cytoplasm GO:0005886C:plasma membrane GO:0005938C:cell cortex |
- |
| 18143 |
SRR953582_primary_scf7180001911735_331-2040
Len: 1,709 bp
E-val: 6.1E-95
|
XP_018959286.1PREDICTED: next to BRCA1 gene 1 protein-like, partial
|
- | |
| 18144 |
SRR953582_primary_scf7180001911773_1-1111
Len: 1,110 bp
E-val: 5.7E-41
|
BAE46430.1reverse transcriptase
|
- | |
| 18145 |
SRR953582_primary_scf7180001911839_160-1514
Len: 1,354 bp
E-val: 2.1E-21
|
XP_016363570.1PREDICTED: peptidyl-prolyl cis-trans isomerase-like 2
peptidylprolyl isomerase; Acyltransferases
|
GO:0000209P:protein polyubiquitination GO:0006457P:protein folding GO:0003755F:peptidyl-prolyl cis-trans isomerase activity GO:0061630F:ubiquitin protein ligase activity GO:0071013C:catalytic step 2 spliceosome |
EC:EC:5.2.1.8 EC:EC:2.3.2 |
| 18146 |
SRR953582_primary_scf7180001911942_1-1016
Len: 1,015 bp
E-val: 6.4E-23
|
XP_018958399.1PREDICTED: thyrotropin-releasing hormone-degrading ectoenzyme-like, partial
Acting on peptide bonds (peptidases)
|
GO:0006508P:proteolysis GO:0043171P:peptide catabolic process GO:0008270F:zinc ion binding GO:0042277F:peptide binding GO:0070006F:metalloaminopeptidase activity GO:0005615C:extracellular space GO:0005737C:cytoplasm GO:0016020C:membrane |
EC:EC:3.4.11 |
| 18147 |
SRR953582_primary_scf7180001911951_111-629
Len: 518 bp
E-val: 3.5E-17
|
XP_018945557.1PREDICTED: kinetochore protein NDC80 homolog
Transferring phosphorus-containing groups
|
GO:0007052P:mitotic spindle organization GO:0051301P:cell division GO:0090267P:positive regulation of mitotic cell cycle spindle assembly checkpoint GO:1990758P:mitotic sister chromatid biorientation GO:0004674F:protein serine/threonine kinase activity GO:0008017F:microtubule binding GO:0140483F:kinetochore adaptor activity GO:0005634C:nucleus GO:0031262C:Ndc80 complex |
EC:EC:2.7.11 |
| 18148 |
SRR953582_primary_scf7180001911984_1-1688
Len: 1,687 bp
E-val: 7.8E-26
|
KTF77670.1hypothetical protein cypCar_00032956, partial
|
GO:0031124P:mRNA 3'-end processing GO:0000993F:RNA polymerase II complex binding |
- |
| 18149 |
SRR953582_primary_scf7180001912073_1-1227
Len: 1,226 bp
E-val: 9.9E-71
|
XP_018947312.1PREDICTED: urea transporter 2-like
|
GO:0015840P:urea transport |
- |
| 18150 |
SRR953582_primary_scf7180001912759_18-839
Len: 821 bp
E-val: 2.8E-13
|
KTG39223.1hypothetical protein cypCar_00007585
|
GO:0007283P:spermatogenesis GO:0030154P:cell differentiation GO:0031047P:regulatory ncRNA-mediated gene silencing GO:0051321P:meiotic cell cycle GO:0016020C:membrane GO:0071546C:pi-body |
- |