Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 18226 |
SRR953582_primary_scf7180001915640_1-2834
Len: 2,833 bp
E-val: 1.4E-43
|
XP_018933635.1PREDICTED: tenascin-like
|
GO:0001868P:regulation of complement activation, lectin pathway GO:0010185P:regulation of cellular defense response GO:0030155P:regulation of cell adhesion GO:0031175P:neuron projection development GO:0042806F:fucose binding GO:0005615C:extracellular space |
- |
| 18227 |
SRR953582_primary_scf7180001915645_1-4318
Len: 4,317 bp
E-val: 1.3E-45
|
KTF87206.1hypothetical protein cypCar_00040388, partial
|
GO:0007275P:multicellular organism development |
- |
| 18228 |
SRR953582_primary_scf7180001915652_1-9399
Len: 9,398 bp
E-val: 1.8E-15
|
XP_026132929.1probable JmjC domain-containing histone demethylation protein 2C isoform X3
Oxidoreductases
|
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0061515P:myeloid cell development GO:0003712F:transcription coregulator activity GO:0008270F:zinc ion binding GO:0031490F:chromatin DNA binding GO:0032454F:histone H3K9 demethylase activity GO:0051213F:dioxygenase activity GO:0000118C:histone deacetylase complex GO:0000785C:chromatin |
EC:EC:1 |
| 18229 |
SRR953582_primary_scf7180001915654_1-5577
Len: 5,576 bp
E-val: 1.1E-201
|
XP_018925849.1PREDICTED: transforming acidic coiled-coil-containing protein 3-like
|
GO:0007052P:mitotic spindle organization GO:0007097P:nuclear migration GO:0021987P:cerebral cortex development GO:0005737C:cytoplasm GO:0005856C:cytoskeleton |
- |
| 18230 |
SRR953582_primary_scf7180001915666_3996-10991
Len: 6,995 bp
E-val: 2.7E-24
|
RXN16356.1BRCA1-A complex subunit BRE
|
GO:0006302P:double-strand break repair GO:0006325P:chromatin organization GO:0006915P:apoptotic process GO:0007095P:mitotic G2 DNA damage checkpoint signaling GO:0010212P:response to ionizing radiation GO:0045739P:positive regulation of DNA repair GO:0051301P:cell division GO:0031593F:polyubiquitin modification-dependent protein binding GO:0005737C:cytoplasm GO:0070531C:BRCA1-A complex GO:0070552C:BRISC complex |
- |
| 18231 |
SRR953582_primary_scf7180001915668_407-5079
Len: 4,672 bp
E-val: 5.9E-31
|
XP_016295278.1PREDICTED: uncharacterized protein LOC107653148 isoform X1
protein-tyrosine-phosphatase
|
GO:0006338P:chromatin remodeling GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0140793F:histone H2AXY142 phosphatase activity GO:0016020C:membrane |
EC:EC:3.1.3.48 |
| 18232 |
SRR953582_primary_scf7180001915674_453-1061
Len: 608 bp
E-val: 2.0E-109
|
XP_018978316.1PREDICTED: RING finger protein 222-like
Acyltransferases
|
GO:0016567P:protein ubiquitination GO:0008270F:zinc ion binding GO:0061630F:ubiquitin protein ligase activity GO:0016020C:membrane |
EC:EC:2.3.2 |
| 18233 |
SRR953582_primary_scf7180001915680_415-5613
Len: 5,198 bp
E-val: 0.0
|
KTG46785.1hypothetical protein cypCar_00006899
|
GO:0007156P:homophilic cell-cell adhesion GO:0009653P:anatomical structure morphogenesis GO:0016477P:cell migration GO:0031109P:microtubule polymerization or depolymerization GO:0036302P:atrioventricular canal development GO:0060471P:cortical granule exocytosis GO:1903673P:mitotic cleavage furrow formation GO:0005509F:calcium ion binding GO:0008013F:beta-catenin binding GO:0045296F:cadherin binding GO:0005911C:cell-cell junction GO:0016342C:catenin complex |
- |
| 18234 |
SRR953582_primary_scf7180001915683_2886-5335
Len: 2,449 bp
E-val: 1.6E-112
|
XP_018939639.1PREDICTED: coiled-coil domain-containing protein 92-like
|
-
|
- |
| 18235 |
SRR953582_primary_scf7180001915693_4601-4858
Len: 257 bp
E-val:
|
-
|
-
|
- |
| 18236 |
SRR953582_primary_scf7180001915700_2147-6022
Len: 3,875 bp
E-val: 3.5E-29
|
XP_026096960.1arginine-glutamic acid dipeptide repeats protein-like isoform X1
|
GO:0040036P:regulation of fibroblast growth factor receptor signaling pathway GO:0045879P:negative regulation of smoothened signaling pathway GO:0048839P:inner ear development GO:0060037P:pharyngeal system development GO:0060536P:cartilage morphogenesis GO:0061386P:closure of optic fissure GO:0001222F:transcription corepressor binding GO:0003714F:transcription corepressor activity GO:0005634C:nucleus |
- |
| 18237 |
SRR953582_primary_scf7180001915702_900-4691
Len: 3,791 bp
E-val: 0.0
|
XP_018981167.1PREDICTED: sal-like protein 4
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0035118P:embryonic pectoral fin morphogenesis GO:0045743P:positive regulation of fibroblast growth factor receptor signaling pathway GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003682F:chromatin binding GO:0008270F:zinc ion binding GO:0005634C:nucleus |
- |
| 18238 |
SRR953582_primary_scf7180001915703_1-3717
Len: 3,716 bp
E-val: 6.2E-84
|
KTF83232.1hypothetical protein cypCar_00043375, partial
ubiquitinyl hydrolase 1
|
GO:0016579P:protein deubiquitination GO:0031647P:regulation of protein stability GO:0004843F:cysteine-type deubiquitinase activity GO:0005634C:nucleus GO:0005829C:cytosol |
EC:EC:3.4.19.12 |
| 18239 |
SRR953582_primary_scf7180001915724_387-5004
Len: 4,617 bp
E-val: 3.8E-200
|
XP_018920423.1PREDICTED: galectin-3-binding protein A-like
|
- | |
| 18240 |
SRR953582_primary_scf7180001915743_1957-3645
Len: 1,688 bp
E-val: 2.3E-291
|
XP_016380143.1PREDICTED: protein FAM171A1-like
glycylpeptide N-tetradecanoyltransferase
|
GO:0008360P:regulation of cell shape GO:0043149P:stress fiber assembly GO:0004379F:glycylpeptide N-tetradecanoyltransferase activity GO:0005886C:plasma membrane |
EC:EC:2.3.1.97 |
| 18241 |
SRR953582_primary_scf7180001915756_1325-4141
Len: 2,816 bp
E-val: 1.1E-53
|
XP_018927833.1PREDICTED: large neutral amino acids transporter small subunit 4-like
|
GO:0015804P:neutral amino acid transport GO:0055085P:transmembrane transport GO:1902475P:L-alpha-amino acid transmembrane transport GO:0005507F:copper ion binding GO:0015175F:neutral L-amino acid transmembrane transporter activity GO:0015179F:L-amino acid transmembrane transporter activity GO:0016491F:oxidoreductase activity GO:0022857F:transmembrane transporter activity GO:0046872F:metal ion binding GO:0005886C:plasma membrane GO:0016323C:basolateral plasma membrane |
- |
| 18242 |
SRR953582_primary_scf7180001915768_161-2850
Len: 2,689 bp
E-val: 1.1E-40
|
KTF93943.1hypothetical protein cypCar_00021028, partial
DNA helicase; Isomerases altering macromolecular conformation; nucleoside-triphosphate phosphatase
|
GO:0006338P:chromatin remodeling GO:0048703P:embryonic viscerocranium morphogenesis GO:0060322P:head development GO:0003677F:DNA binding GO:0003678F:DNA helicase activity GO:0003682F:chromatin binding GO:0016887F:ATP hydrolysis activity GO:0042393F:histone binding GO:0043167F:ion binding GO:0140658F:ATP-dependent chromatin remodeler activity GO:0016581C:NuRD complex |
EC:EC:3.6.4.12 EC:EC:5.6.2 EC:EC:3.6.1.15 |
| 18243 |
SRR953582_primary_scf7180001915772_1-1993
Len: 1,992 bp
E-val: 6.5E-72
|
XP_016422019.1PREDICTED: uncharacterized protein LOC107750954
|
GO:0000165P:MAPK cascade GO:0035556P:intracellular signal transduction GO:0004672F:protein kinase activity GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0008349F:MAP kinase kinase kinase kinase activity GO:0005737C:cytoplasm |
- |
| 18244 |
SRR953582_primary_scf7180001915772_2327-2737
Len: 410 bp
E-val: 1.2E-17
|
XP_018924331.1PREDICTED: uncharacterized protein LOC109051228, partial
|
GO:0003950F:NAD+ poly-ADP-ribosyltransferase activity GO:0008270F:zinc ion binding GO:0046872F:metal ion binding GO:0005634C:nucleus |
- |
| 18245 |
SRR953582_primary_scf7180001915772_2771-5614
Len: 2,843 bp
E-val: 1.7E-44
|
XP_016392334.1PREDICTED: polypeptide N-acetylgalactosaminyltransferase 18-like
polypeptide N-acetylgalactosaminyltransferase
|
GO:0006493P:protein O-linked glycosylation GO:0004653F:polypeptide N-acetylgalactosaminyltransferase activity GO:0030246F:carbohydrate binding GO:0000139C:Golgi membrane |
EC:EC:2.4.1.41 |
| 18246 |
SRR953582_primary_scf7180001915779_930-3692
Len: 2,762 bp
E-val: 2.6E-127
|
XP_018929352.1PREDICTED: indian hedgehog B protein-like
Acting on peptide bonds (peptidases); Transferases
|
GO:0001649P:osteoblast differentiation GO:0001708P:cell fate specification GO:0001957P:intramembranous ossification GO:0007224P:smoothened signaling pathway GO:0007267P:cell-cell signaling GO:0010468P:regulation of gene expression GO:0016539P:intein-mediated protein splicing GO:0016540P:protein autoprocessing GO:0048484P:enteric nervous system development GO:0048795P:swim bladder morphogenesis GO:0005113F:patched binding GO:0005509F:calcium ion binding GO:0008233F:peptidase activity GO:0016740F:transferase activity GO:0000139C:Golgi membrane GO:0005615C:extracellular space GO:0005789C:endoplasmic reticulum membrane GO:0005886C:plasma membrane |
EC:EC:3.4 EC:EC:2 |
| 18247 |
SRR953582_primary_scf7180001915793_1-5690
Len: 5,689 bp
E-val: 1.7E-88
|
XP_026124193.1myotubularin-related protein 13-like isoform X4
|
- | |
| 18248 |
SRR953582_primary_scf7180001915832_1-5356
Len: 5,355 bp
E-val: 2.2E-170
|
XP_016405933.1PREDICTED: LOW QUALITY PROTEIN: protein MON2 homolog
|
GO:0015031P:protein transport |
- |
| 18249 |
SRR953582_primary_scf7180001915833_673-6478
Len: 5,805 bp
E-val: 4.0E-138
|
KTG40365.1hypothetical protein cypCar_00007719
|
GO:0001886P:endothelial cell morphogenesis GO:0007165P:signal transduction GO:0008360P:regulation of cell shape GO:0016477P:cell migration GO:0030036P:actin cytoskeleton organization GO:0035912P:dorsal aorta morphogenesis GO:0005768C:endosome GO:0005856C:cytoskeleton GO:0005911C:cell-cell junction GO:0071944C:cell periphery |
- |
| 18250 |
SRR953582_primary_scf7180001915856_1-4907
Len: 4,906 bp
E-val: 2.5E-64
|
XP_018933320.1PREDICTED: sphingomyelin phosphodiesterase 4 isoform X1
|
GO:0006685P:sphingomyelin catabolic process GO:0046475P:glycerophospholipid catabolic process GO:0046513P:ceramide biosynthetic process GO:0050290F:sphingomyelin phosphodiesterase D activity GO:0016020C:membrane |
- |