Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 18276 |
SRR953582_primary_scf7180001916127_1-2540
Len: 2,539 bp
E-val: 1.3E-29
|
XP_016328490.1PREDICTED: LOW QUALITY PROTEIN: lysyl oxidase homolog 4-like
protein-lysine 6-oxidase
|
GO:0030199P:collagen fibril organization GO:0004720F:protein-lysine 6-oxidase activity GO:0005507F:copper ion binding GO:0005615C:extracellular space GO:0016020C:membrane |
EC:EC:1.4.3.13 |
| 18277 |
SRR953582_primary_scf7180001916127_4270-4568
Len: 298 bp
E-val: 4.4E-33
|
XP_018961839.1PREDICTED: lysyl oxidase homolog 4-like
protein-lysine 6-oxidase
|
GO:0030199P:collagen fibril organization GO:0004720F:protein-lysine 6-oxidase activity GO:0005507F:copper ion binding GO:0005615C:extracellular space GO:0016020C:membrane |
EC:EC:1.4.3.13 |
| 18278 |
SRR953582_primary_scf7180001916130_3867-4868
Len: 1,001 bp
E-val: 1.1E-184
|
XP_018943803.1PREDICTED: probable G-protein coupled receptor 146
|
GO:0007186P:G protein-coupled receptor signaling pathway GO:0004930F:G protein-coupled receptor activity GO:0005886C:plasma membrane |
- |
| 18279 |
SRR953582_primary_scf7180001916147_1-4036
Len: 4,035 bp
E-val: 1.4E-108
|
XP_018613985.1PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase
|
GO:0000712P:resolution of meiotic recombination intermediates GO:0006397P:mRNA processing GO:0007399P:nervous system development GO:0003676F:nucleic acid binding GO:0003678F:DNA helicase activity GO:0004386F:helicase activity GO:0005524F:ATP binding GO:0016787F:hydrolase activity GO:0016887F:ATP hydrolysis activity GO:0005634C:nucleus GO:1990904C:ribonucleoprotein complex |
- |
| 18280 |
SRR953582_primary_scf7180001916148_558-3413
Len: 2,855 bp
E-val: 4.2E-40
|
KTF83645.1hypothetical protein cypCar_00006386
|
GO:0006281P:DNA repair GO:0006325P:chromatin organization GO:0031491F:nucleosome binding GO:0005634C:nucleus GO:0005694C:chromosome |
- |
| 18281 |
SRR953582_primary_scf7180001916172_450-4359
Len: 3,909 bp
E-val: 3.5E-194
|
XP_018936911.1PREDICTED: uncharacterized protein LOC109064319
|
-
|
- |
| 18282 |
SRR953582_primary_scf7180001916180_1-4253
Len: 4,252 bp
E-val: 6.7E-42
|
KTG02114.1hypothetical protein cypCar_00022122, partial
|
GO:0001963P:synaptic transmission, dopaminergic GO:0007195P:adenylate cyclase-inhibiting dopamine receptor signaling pathway GO:0014059P:regulation of dopamine secretion GO:0043266P:regulation of potassium ion transport GO:0051481P:negative regulation of cytosolic calcium ion concentration GO:0051967P:negative regulation of synaptic transmission, glutamatergic GO:0060158P:phospholipase C-activating dopamine receptor signaling pathway GO:0071881P:adenylate cyclase-inhibiting adrenergic receptor signaling pathway GO:1904057P:negative regulation of sensory perception of pain GO:0001591F:dopamine neurotransmitter receptor activity, coupled via Gi/Go GO:0004938F:alpha2-adrenergic receptor activity GO:0042734C:presynaptic membrane GO:0098978C:glutamatergic synapse |
- |
| 18283 |
SRR953582_primary_scf7180001916183_1661-4442
Len: 2,781 bp
E-val: 1.9E-295
|
XP_026112707.1probable ribonuclease ZC3H12B isoform X1
|
GO:0003729F:mRNA binding GO:0004521F:RNA endonuclease activity GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0036464C:cytoplasmic ribonucleoprotein granule |
- |
| 18284 |
SRR953582_primary_scf7180001916197_1-3747
Len: 3,746 bp
E-val: 9.5E-24
|
XP_021457303.1sodium-coupled neutral amino acid transporter 9
|
GO:0006110P:regulation of glycolytic process GO:0006111P:regulation of gluconeogenesis GO:0006520P:amino acid metabolic process GO:0006867P:asparagine transport GO:0006868P:glutamine transport GO:0015820P:L-leucine transport GO:0071230P:cellular response to amino acid stimulus GO:1900037P:regulation of cellular response to hypoxia GO:1903826P:L-arginine transmembrane transport GO:1904263P:positive regulation of TORC1 signaling GO:0005085F:guanyl-nucleotide exchange factor activity GO:0015182F:L-asparagine transmembrane transporter activity GO:0015186F:L-glutamine transmembrane transporter activity GO:0015190F:L-leucine transmembrane transporter activity GO:0015485F:cholesterol binding GO:0032935F:sterol sensor activity GO:0034618F:arginine binding GO:0046872F:metal ion binding GO:0061459F:L-arginine transmembrane transporter activity GO:0140785F:amino acid sensor activity GO:0005765C:lysosomal membrane GO:0031902C:late endosome membrane GO:0071986C:Ragulator complex |
- |
| 18285 |
SRR953582_primary_scf7180001916221_1865-4117
Len: 2,252 bp
E-val: 3.0E-49
|
XP_018925394.1PREDICTED: LOW QUALITY PROTEIN: cilia- and flagella-associated protein 44
|
GO:0003341P:cilium movement GO:0005737C:cytoplasm GO:0005856C:cytoskeleton GO:0005929C:cilium GO:0031514C:motile cilium GO:0042995C:cell projection |
- |
| 18286 |
SRR953582_primary_scf7180001916235_1-5443
Len: 5,442 bp
E-val: 1.7E-58
|
XP_018920818.1PREDICTED: inactive tyrosine-protein kinase 7-like
receptor protein-tyrosine kinase; Transferring phosphorus-containing groups
|
GO:0016043P:cellular component organization GO:0019221P:cytokine-mediated signaling pathway GO:0048008P:platelet-derived growth factor receptor signaling pathway GO:0071363P:cellular response to growth factor stimulus GO:0004674F:protein serine/threonine kinase activity GO:0005003F:ephrin receptor activity GO:0005017F:platelet-derived growth factor receptor activity GO:0043167F:ion binding GO:0140995F:histone H2A kinase activity GO:0140996F:histone H3 kinase activity GO:0140998F:histone H2B kinase activity GO:0016020C:membrane GO:0036477C:somatodendritic compartment GO:0043005C:neuron projection |
EC:EC:2.7.10.1 EC:EC:2.7.11 |
| 18287 |
SRR953582_primary_scf7180001916239_1-6916
Len: 6,915 bp
E-val: 4.3E-14
|
XP_026091523.1contactin-associated protein-like 5
|
GO:0016020C:membrane |
- |
| 18288 |
SRR953582_primary_scf7180001916247_1427-1990
Len: 563 bp
E-val: 3.2E-16
|
RXN32928.1translation initiation factor IF-2-like protein
|
GO:0009653P:anatomical structure morphogenesis GO:0045216P:cell-cell junction organization GO:0098609P:cell-cell adhesion GO:0005515F:protein binding GO:0005886C:plasma membrane |
- |
| 18289 |
SRR953582_primary_scf7180001916247_2797-5246
Len: 2,449 bp
E-val: 5.9E-83
|
XP_016427471.1PREDICTED: nucleolar GTP-binding protein 2-like
|
GO:0000448P:cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0003407P:neural retina development GO:0007096P:regulation of exit from mitosis GO:0045664P:regulation of neuron differentiation GO:0005525F:GTP binding GO:0005634C:nucleus GO:0005730C:nucleolus |
- |
| 18290 |
SRR953582_primary_scf7180001916263_1-4366
Len: 4,365 bp
E-val: 9.2E-111
|
KTG34914.1hypothetical protein cypCar_00017527
Hydrolases
|
GO:0005524F:ATP binding GO:0016787F:hydrolase activity |
EC:EC:3 |
| 18291 |
SRR953582_primary_scf7180001916271_1-3992
Len: 3,991 bp
E-val: 1.7E-87
|
XP_026062635.1roquin-1-like
|
GO:0000209P:protein polyubiquitination GO:0000288P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay GO:0006511P:ubiquitin-dependent protein catabolic process GO:0003725F:double-stranded RNA binding GO:0003729F:mRNA binding GO:0008270F:zinc ion binding GO:0016740F:transferase activity GO:0035613F:RNA stem-loop binding GO:0046872F:metal ion binding GO:0061630F:ubiquitin protein ligase activity GO:0000932C:P-body GO:0010494C:cytoplasmic stress granule |
- |
| 18292 |
SRR953582_primary_scf7180001916281_1-4607
Len: 4,606 bp
E-val: 9.7E-87
|
KTF94809.1hypothetical protein cypCar_00000534
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0005634C:nucleus GO:0005667C:transcription regulator complex |
- |
| 18293 |
SRR953582_primary_scf7180001916287_1742-3727
Len: 1,985 bp
E-val: 0.0
|
XP_016123213.1PREDICTED: protein capicua homolog isoform X1
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
- |
| 18294 |
SRR953582_primary_scf7180001916290_1-5046
Len: 5,045 bp
E-val: 0.0
|
KTG43585.1hypothetical protein cypCar_00016307
|
GO:0046329P:negative regulation of JNK cascade GO:0090090P:negative regulation of canonical Wnt signaling pathway GO:2000095P:regulation of Wnt signaling pathway, planar cell polarity pathway GO:0005737C:cytoplasm |
- |
| 18295 |
SRR953582_primary_scf7180001916314_1-5742
Len: 5,741 bp
E-val: 1.5E-193
|
XP_018956727.1PREDICTED: zinc finger protein 710-like
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
- |
| 18296 |
SRR953582_primary_scf7180001916321_262-1828
Len: 1,566 bp
E-val: 2.8E-17
|
XP_026051808.1nuclear RNA export factor 1-like isoform X2
|
GO:0006406P:mRNA export from nucleus GO:0016973P:poly(A)+ mRNA export from nucleus GO:0051028P:mRNA transport GO:0003723F:RNA binding GO:0005634C:nucleus GO:0005654C:nucleoplasm GO:0005737C:cytoplasm |
- |
| 18297 |
SRR953582_primary_scf7180001916354_1-5691
Len: 5,690 bp
E-val: 0.0
|
KTG35165.1hypothetical protein cypCar_00015243
|
GO:0005634C:nucleus |
- |
| 18298 |
SRR953582_primary_scf7180001916363_3198-4691
Len: 1,493 bp
E-val: 5.1E-29
|
XP_018958330.1PREDICTED: phosphofurin acidic cluster sorting protein 1-like
|
GO:0072659P:protein localization to plasma membrane GO:0044325F:transmembrane transporter binding |
- |
| 18299 |
SRR953582_primary_scf7180001916386_581-5265
Len: 4,684 bp
E-val: 7.7E-132
|
XP_018954831.1PREDICTED: interleukin-1 receptor accessory protein-like 1-B
Hydrolases
|
GO:0019221P:cytokine-mediated signaling pathway GO:0045920P:negative regulation of exocytosis GO:0004908F:interleukin-1 receptor activity GO:0016787F:hydrolase activity GO:0005737C:cytoplasm GO:0005886C:plasma membrane |
EC:EC:3 |
| 18300 |
SRR953582_primary_scf7180001916400_587-4891
Len: 4,304 bp
E-val: 0.0
|
XP_016415838.1PREDICTED: histone-lysine N-methyltransferase SETD1B-A-like
|
GO:0043229C:intracellular organelle |
- |