Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 18651 |
SRR953582_primary_scf7180001920676_1-2883
Len: 2,882 bp
E-val: 2.8E-116
|
XP_018974268.1PREDICTED: polycomb protein SCMH1
|
GO:0006355P:regulation of DNA-templated transcription GO:0045892P:negative regulation of DNA-templated transcription GO:0003682F:chromatin binding GO:0042393F:histone binding GO:0005634C:nucleus |
- |
| 18652 |
SRR953582_primary_scf7180001920693_1655-2359
Len: 704 bp
E-val: 3.4E-15
|
KTG38627.1hypothetical protein cypCar_00042041
protein disulfide-isomerase
|
GO:0006457P:protein folding GO:0006816P:calcium ion transport GO:0034976P:response to endoplasmic reticulum stress GO:0098655P:monoatomic cation transmembrane transport GO:0003756F:protein disulfide isomerase activity GO:0005261F:monoatomic cation channel activity GO:0005788C:endoplasmic reticulum lumen GO:0005886C:plasma membrane GO:0005929C:cilium GO:0009986C:cell surface |
EC:EC:5.3.4.1 |
| 18653 |
SRR953582_primary_scf7180001920734_1-2895
Len: 2,894 bp
E-val: 4.2E-19
|
XP_026139371.1SWI/SNF complex subunit SMARCC1-like isoform X2
|
GO:0006325P:chromatin organization GO:0006355P:regulation of DNA-templated transcription GO:0048858P:cell projection morphogenesis GO:0016514C:SWI/SNF complex GO:0031981C:nuclear lumen GO:0045202C:synapse |
- |
| 18654 |
SRR953582_primary_scf7180001920781_1-2327
Len: 2,326 bp
E-val: 1.3E-42
|
XP_028971226.1fibronectin
|
GO:0009987P:cellular process GO:0005488F:binding |
- |
| 18655 |
SRR953582_primary_scf7180001920803_1-3272
Len: 3,271 bp
E-val: 6.2E-237
|
XP_018951363.1PREDICTED: ubiquitin-protein ligase E3A isoform X2
Transferases
|
GO:0016567P:protein ubiquitination GO:0016740F:transferase activity GO:0005622C:intracellular anatomical structure |
EC:EC:2 |
| 18656 |
SRR953582_primary_scf7180001920811_1-3370
Len: 3,369 bp
E-val: 1.3E-85
|
KTG44772.1hypothetical protein cypCar_00019531
|
GO:0001682P:tRNA 5'-leader removal GO:0006486P:obsolete protein glycosylation GO:0008033P:tRNA processing GO:0031643P:positive regulation of myelination GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0000976F:transcription cis-regulatory region binding GO:0004526F:ribonuclease P activity GO:0008270F:zinc ion binding GO:0008373F:sialyltransferase activity GO:0016757F:glycosyltransferase activity GO:0046872F:metal ion binding GO:0000139C:Golgi membrane GO:0005737C:cytoplasm GO:0005794C:Golgi apparatus GO:0016020C:membrane GO:0030677C:ribonuclease P complex GO:1902555C:endoribonuclease complex GO:1990904C:ribonucleoprotein complex |
- |
| 18657 |
SRR953582_primary_scf7180001920814_1-3950
Len: 3,949 bp
E-val: 1.5E-112
|
KTF93315.1hypothetical protein cypCar_00011023
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
- |
| 18658 |
SRR953582_primary_scf7180001920819_399-2463
Len: 2,064 bp
E-val: 3.0E-64
|
KTF88649.1hypothetical protein cypCar_00015216
|
GO:0043124P:negative regulation of canonical NF-kappaB signal transduction GO:0051059F:NF-kappaB binding GO:0140311F:protein sequestering activity GO:0005829C:cytosol |
- |
| 18659 |
SRR953582_primary_scf7180001920821_805-2939
Len: 2,134 bp
E-val: 1.6E-28
|
XP_016306423.1PREDICTED: glypican-3-like
|
GO:0042074P:cell migration involved in gastrulation GO:0045732P:positive regulation of protein catabolic process GO:0045807P:positive regulation of endocytosis GO:0045879P:negative regulation of smoothened signaling pathway GO:0060976P:coronary vasculature development GO:0090090P:negative regulation of canonical Wnt signaling pathway GO:0090263P:positive regulation of canonical Wnt signaling pathway GO:1905475P:regulation of protein localization to membrane GO:2000050P:regulation of non-canonical Wnt signaling pathway GO:0005576C:extracellular region GO:0005886C:plasma membrane GO:0009986C:cell surface GO:0098552C:side of membrane |
- |
| 18660 |
SRR953582_primary_scf7180001920837_1-17
Len: 16 bp
E-val:
|
-
|
-
|
- |
| 18661 |
SRR953582_primary_scf7180001920837_1843-2850
Len: 1,007 bp
E-val: 3.4E-53
|
RXN39025.1glutamate receptor NMDA 2D-like protein
|
GO:0034220P:monoatomic ion transmembrane transport GO:0015276F:ligand-gated monoatomic ion channel activity GO:0038023F:signaling receptor activity GO:0045211C:postsynaptic membrane |
- |
| 18662 |
SRR953582_primary_scf7180001920841_2002-3489
Len: 1,487 bp
E-val: 1.5E-294
|
KTG31141.1hypothetical protein cypCar_00046583, partial
|
GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:1990756F:ubiquitin-like ligase-substrate adaptor activity GO:0005737C:cytoplasm GO:0031463C:Cul3-RING ubiquitin ligase complex |
- |
| 18663 |
SRR953582_primary_scf7180001920863_1-1536
Len: 1,535 bp
E-val: 1.9E-7
|
XP_016141987.1PREDICTED: serine/threonine-protein kinase Sgk1-like
|
GO:0006325P:chromatin organization GO:0006355P:regulation of DNA-templated transcription GO:0035556P:intracellular signal transduction GO:0045892P:negative regulation of DNA-templated transcription GO:0048812P:neuron projection morphogenesis GO:0003682F:chromatin binding GO:0004672F:protein kinase activity GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0015459F:potassium channel regulator activity GO:0042393F:histone binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
- |
| 18664 |
SRR953582_primary_scf7180001920871_1039-3443
Len: 2,404 bp
E-val: 4.2E-33
|
XP_026100640.1BAI1-associated protein 3-like
|
GO:0001956P:positive regulation of neurotransmitter secretion GO:1905413P:regulation of dense core granule exocytosis GO:0000149F:SNARE binding GO:0005886C:plasma membrane GO:0031902C:late endosome membrane GO:0032588C:trans-Golgi network membrane GO:0055038C:recycling endosome membrane GO:0098793C:presynapse GO:0099503C:secretory vesicle |
- |
| 18665 |
SRR953582_primary_scf7180001920906_1-1265
Len: 1,264 bp
E-val: 1.1E-32
|
KTG07027.1hypothetical protein cypCar_00007015, partial
|
GO:0006096P:glycolytic process GO:0000287F:magnesium ion binding GO:0004634F:phosphopyruvate hydratase activity GO:0016829F:lyase activity GO:0046872F:metal ion binding GO:0000015C:phosphopyruvate hydratase complex |
- |
| 18666 |
SRR953582_primary_scf7180001920912_1051-3145
Len: 2,094 bp
E-val: 8.3E-9
|
KTF92385.1hypothetical protein cypCar_00040355
|
GO:0003779F:actin binding |
- |
| 18667 |
SRR953582_primary_scf7180001920949_1-3662
Len: 3,661 bp
E-val: 2.8E-97
|
KTG06386.1hypothetical protein cypCar_00003185
|
GO:0008277P:regulation of G protein-coupled receptor signaling pathway GO:0005096F:GTPase activator activity GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005886C:plasma membrane |
- |
| 18668 |
SRR953582_primary_scf7180001920954_1-4351
Len: 4,350 bp
E-val: 4.5E-17
|
XP_018978766.1PREDICTED: LOW QUALITY PROTEIN: SLIT-ROBO Rho GTPase-activating protein 1-like
|
GO:0007165P:signal transduction GO:0030336P:negative regulation of cell migration GO:0005096F:GTPase activator activity GO:0005737C:cytoplasm |
- |
| 18669 |
SRR953582_primary_scf7180001920955_204-4551
Len: 4,347 bp
E-val: 0.0
|
KTG41600.1hypothetical protein cypCar_00000709
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
- |
| 18670 |
SRR953582_primary_scf7180001920995_544-3516
Len: 2,972 bp
E-val: 0.0
|
XP_016305948.1PREDICTED: sal-like protein 3
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
- |
| 18671 |
SRR953582_primary_scf7180001921007_1488-3319
Len: 1,831 bp
E-val: 1.1E-9
|
RXN26559.1kinesin KIF26A
Isomerases altering macromolecular conformation
|
GO:0007018P:microtubule-based movement GO:0048731P:system development GO:0003777F:microtubule motor activity GO:0005524F:ATP binding GO:0008017F:microtubule binding GO:0005856C:cytoskeleton |
EC:EC:5.6.1 |
| 18672 |
SRR953582_primary_scf7180001921052_1-2846
Len: 2,845 bp
E-val: 5.5E-24
|
XP_026118197.1E3 ubiquitin-protein ligase RNF220-like isoform X6
Acyltransferases
|
GO:0016567P:protein ubiquitination GO:0061630F:ubiquitin protein ligase activity |
EC:EC:2.3.2 |
| 18673 |
SRR953582_primary_scf7180001921077_699-2700
Len: 2,001 bp
E-val: 1.3E-30
|
XP_026119771.1potassium voltage-gated channel subfamily H member 8-like
|
GO:0042391P:regulation of membrane potential GO:1990573P:potassium ion import across plasma membrane GO:0005249F:voltage-gated potassium channel activity GO:0042802F:identical protein binding GO:0106151F:CNBH domain intrinsic ligand binding GO:0005634C:nucleus GO:0005886C:plasma membrane GO:0034702C:monoatomic ion channel complex |
- |
| 18674 |
SRR953582_primary_scf7180001921083_1-1935
Len: 1,934 bp
E-val: 5.1E-37
|
KTG45427.1hypothetical protein cypCar_00038495, partial
|
GO:0000132P:establishment of mitotic spindle orientation GO:0007399P:nervous system development GO:0016042P:lipid catabolic process GO:0030154P:cell differentiation GO:0031124P:mRNA 3'-end processing GO:0032259P:methylation GO:0051012P:microtubule sliding GO:0051301P:cell division GO:0003824F:catalytic activity GO:0070840F:dynein complex binding GO:0005737C:cytoplasm GO:0005813C:centrosome GO:0005819C:spindle GO:0005847C:mRNA cleavage and polyadenylation specificity factor complex GO:0005874C:microtubule GO:0005875C:microtubule associated complex GO:0031965C:nuclear membrane |
- |
| 18675 |
SRR953582_primary_scf7180001921084_1-3317
Len: 3,316 bp
E-val: 3.7E-104
|
XP_018970809.1PREDICTED: tumor suppressor p53-binding protein 1-like
|
GO:0000077P:DNA damage checkpoint signaling GO:0006974P:DNA damage response GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0042393F:histone binding GO:0005634C:nucleus |
- |