Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 18826 |
SRR953582_primary_scf7180001923788_1-1688
Len: 1,687 bp
E-val: 5.4E-43
|
XP_018948396.1PREDICTED: transmembrane emp24 domain-containing protein 3-like
|
GO:0006886P:intracellular protein transport GO:0006888P:endoplasmic reticulum to Golgi vesicle-mediated transport GO:0007030P:Golgi organization GO:0005789C:endoplasmic reticulum membrane GO:0030126C:COPI vesicle coat GO:0030134C:COPII-coated ER to Golgi transport vesicle GO:0033116C:endoplasmic reticulum-Golgi intermediate compartment membrane |
- |
| 18827 |
SRR953582_primary_scf7180001923813_1-2867
Len: 2,866 bp
E-val: 7.6E-13
|
RXN06757.1serologically defined colon cancer antigen 8
|
GO:0001764P:neuron migration GO:0007098P:centrosome cycle GO:0030010P:establishment of cell polarity GO:0035148P:tube formation GO:0005813C:centrosome GO:0005814C:centriole |
- |
| 18828 |
SRR953582_primary_scf7180001923827_1-869
Len: 868 bp
E-val: 8.0E-67
|
XP_018975942.1PREDICTED: BRISC complex subunit Abro1-like isoform X3
|
GO:0008608P:attachment of spindle microtubules to kinetochore GO:0051301P:cell division GO:0070536P:protein K63-linked deubiquitination GO:0090307P:mitotic spindle assembly GO:0008017F:microtubule binding GO:0031593F:polyubiquitin modification-dependent protein binding GO:0000922C:spindle pole GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005874C:microtubule |
- |
| 18829 |
SRR953582_primary_scf7180001923828_1-2092
Len: 2,091 bp
E-val: 5.0E-30
|
XP_016138632.1PREDICTED: caprin-1-like
|
GO:0017148P:negative regulation of translation GO:0030154P:cell differentiation GO:0003723F:RNA binding GO:0005737C:cytoplasm |
- |
| 18830 |
SRR953582_primary_scf7180001923840_1-1339
Len: 1,338 bp
E-val: 9.3E-22
|
XP_016090632.1PREDICTED: anoctamin-5-like
|
GO:1902476P:chloride transmembrane transport GO:0005254F:chloride channel activity GO:0046983F:protein dimerization activity GO:0005886C:plasma membrane |
- |
| 18831 |
SRR953582_primary_scf7180001923916_404-1372
Len: 968 bp
E-val: 5.3E-144
|
XP_016135216.1PREDICTED: E3 ubiquitin-protein ligase Hakai-like isoform X1
Ligases; Acyltransferases
|
GO:0016567P:protein ubiquitination GO:0030155P:regulation of cell adhesion GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0061630F:ubiquitin protein ligase activity GO:0005634C:nucleus |
EC:EC:6 EC:EC:2.3.2 |
| 18832 |
SRR953582_primary_scf7180001923932_1-871
Len: 870 bp
E-val: 9.0E-10
|
XP_026051641.1phosphatidylinositol-binding clathrin assembly protein-like isoform X1
|
GO:0016185P:synaptic vesicle budding from presynaptic endocytic zone membrane GO:0048268P:clathrin coat assembly GO:0072583P:clathrin-dependent endocytosis GO:0000149F:SNARE binding GO:0005545F:1-phosphatidylinositol binding GO:0005546F:phosphatidylinositol-4,5-bisphosphate binding GO:0032050F:clathrin heavy chain binding GO:0005905C:clathrin-coated pit GO:0008021C:synaptic vesicle GO:0030136C:clathrin-coated vesicle GO:0098894C:extrinsic component of presynaptic endocytic zone membrane |
- |
| 18833 |
SRR953582_primary_scf7180001923933_1-1897
Len: 1,896 bp
E-val: 3.9E-26
|
XP_018962140.1PREDICTED: ankyrin repeat domain-containing protein 11-like
|
GO:0009653P:anatomical structure morphogenesis GO:0055085P:transmembrane transport GO:0022857F:transmembrane transporter activity GO:0016020C:membrane |
- |
| 18834 |
SRR953582_primary_scf7180001923954_528-3020
Len: 2,492 bp
E-val: 4.4E-41
|
KTF88694.1hypothetical protein cypCar_00013265
|
GO:0006941P:striated muscle contraction GO:0007224P:smoothened signaling pathway GO:0014808P:release of sequestered calcium ion into cytosol by sarcoplasmic reticulum GO:0019722P:calcium-mediated signaling GO:0021532P:neural tube patterning GO:0048484P:enteric nervous system development GO:0048741P:skeletal muscle fiber development GO:1990791P:dorsal root ganglion development GO:0005219F:ryanodine-sensitive calcium-release channel activity GO:0005509F:calcium ion binding GO:0005515F:protein binding GO:0005790C:smooth endoplasmic reticulum GO:0030018C:Z disc GO:0033017C:sarcoplasmic reticulum membrane GO:0034704C:calcium channel complex GO:0042383C:sarcolemma |
- |
| 18835 |
SRR953582_primary_scf7180001923965_330-2973
Len: 2,643 bp
E-val: 2.1E-65
|
XP_018971060.1PREDICTED: securin-like
|
GO:0009987P:cellular process GO:0110165C:cellular anatomical structure |
- |
| 18836 |
SRR953582_primary_scf7180001923966_484-2739
Len: 2,255 bp
E-val: 2.3E-41
|
KTF85012.1hypothetical protein cypCar_00032074
|
GO:0006810P:transport GO:0009987P:cellular process GO:0012505C:endomembrane system GO:0030118C:clathrin coat GO:0031410C:cytoplasmic vesicle |
- |
| 18837 |
SRR953582_primary_scf7180001923989_493-2346
Len: 1,853 bp
E-val: 6.3E-77
|
XP_018922734.1PREDICTED: insulin-like growth factor-binding protein complex acid labile subunit
|
GO:0007409P:axonogenesis GO:0009953P:dorsal/ventral pattern formation GO:0051965P:positive regulation of synapse assembly GO:0005520F:insulin-like growth factor binding GO:0005886C:plasma membrane GO:0031012C:extracellular matrix GO:0042567C:insulin-like growth factor ternary complex |
- |
| 18838 |
SRR953582_primary_scf7180001923990_1-2528
Len: 2,527 bp
E-val: 6.2E-19
|
XP_016371393.1PREDICTED: P protein-like
|
GO:0030318P:melanocyte differentiation GO:0042438P:melanin biosynthetic process GO:0055085P:transmembrane transport GO:0033162C:melanosome membrane |
- |
| 18839 |
SRR953582_primary_scf7180001924040_531-2218
Len: 1,687 bp
E-val: 7.3E-40
|
XP_018956428.1PREDICTED: uncharacterized protein KIAA0232-like, partial
|
GO:0016020C:membrane |
- |
| 18840 |
SRR953582_primary_scf7180001924046_1-1878
Len: 1,877 bp
E-val: 2.3E-159
|
KTG42651.1hypothetical protein cypCar_00018383
|
GO:0007267P:cell-cell signaling GO:0042254P:ribosome biogenesis GO:0055085P:transmembrane transport GO:0005243F:gap junction channel activity GO:0005654C:nucleoplasm GO:0005730C:nucleolus GO:0005922C:connexin complex |
- |
| 18841 |
SRR953582_primary_scf7180001924085_1-877
Len: 876 bp
E-val: 4.2E-47
|
KTF75361.1hypothetical protein cypCar_00040041
DNA ligase (ATP)
|
GO:0006273P:lagging strand elongation GO:0006310P:DNA recombination GO:0071897P:DNA biosynthetic process GO:0097681P:double-strand break repair via alternative nonhomologous end joining GO:0003677F:DNA binding GO:0003910F:DNA ligase (ATP) activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0070421C:DNA ligase III-XRCC1 complex |
EC:EC:6.5.1.1 |
| 18842 |
SRR953582_primary_scf7180001924188_1-2273
Len: 2,272 bp
E-val: 2.1E-26
|
XP_018955634.1PREDICTED: katanin p60 ATPase-containing subunit A-like 1
microtubule-severing ATPase; nucleoside-triphosphate phosphatase
|
GO:0007283P:spermatogenesis GO:0009653P:anatomical structure morphogenesis GO:0051013P:microtubule severing GO:0051301P:cell division GO:0003677F:DNA binding GO:0005524F:ATP binding GO:0008017F:microtubule binding GO:0008568F:microtubule severing ATPase activity GO:0016887F:ATP hydrolysis activity GO:0000922C:spindle pole GO:0005634C:nucleus GO:0005694C:chromosome GO:0005737C:cytoplasm GO:0005813C:centrosome GO:0005874C:microtubule |
EC:EC:5.6.1.1 EC:EC:3.6.1.15 |
| 18843 |
SRR953582_primary_scf7180001924203_467-2802
Len: 2,335 bp
E-val: 1.1E-51
|
ROI15325.1Filamin-C
|
GO:0007399P:nervous system development GO:0030036P:actin cytoskeleton organization GO:0003779F:actin binding GO:0051015F:actin filament binding GO:0043232C:intracellular membraneless organelle |
- |
| 18844 |
SRR953582_primary_scf7180001924206_1-1509
Len: 1,508 bp
E-val: 6.9E-82
|
XP_018926988.1PREDICTED: collagen alpha-3(VI) chain-like, partial
|
GO:0007155P:cell adhesion GO:0008045P:motor neuron axon guidance GO:0030198P:extracellular matrix organization GO:0048675P:axon extension GO:0004867F:serine-type endopeptidase inhibitor activity GO:0030020F:extracellular matrix structural constituent conferring tensile strength GO:0005581C:collagen trimer GO:0005615C:extracellular space GO:0016020C:membrane |
- |
| 18845 |
SRR953582_primary_scf7180001924216_304-2409
Len: 2,105 bp
E-val: 3.4E-172
|
KTG39946.1hypothetical protein cypCar_00029559
double-stranded RNA adenine deaminase
|
GO:0006382P:adenosine to inosine editing GO:0006396P:RNA processing GO:0003725F:double-stranded RNA binding GO:0003726F:double-stranded RNA adenosine deaminase activity GO:0008251F:tRNA-specific adenosine deaminase activity GO:0005730C:nucleolus GO:0005737C:cytoplasm |
EC:EC:3.5.4.37 |
| 18846 |
SRR953582_primary_scf7180001924230_1-2759
Len: 2,758 bp
E-val: 3.0E-27
|
XP_018970964.1PREDICTED: receptor tyrosine-protein kinase erbB-2-like
receptor protein-tyrosine kinase
|
GO:0001755P:neural crest cell migration GO:0001837P:epithelial to mesenchymal transition GO:0007173P:epidermal growth factor receptor signaling pathway GO:0007413P:axonal fasciculation GO:0008286P:insulin receptor signaling pathway GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0014044P:Schwann cell development GO:0031101P:fin regeneration GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0032285P:non-myelinated axon ensheathment GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0043066P:negative regulation of apoptotic process GO:0043410P:positive regulation of MAPK cascade GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0048914P:myelination of anterior lateral line nerve axons GO:0048919P:posterior lateral line neuromast development GO:0048932P:myelination of posterior lateral line nerve axons GO:0050679P:positive regulation of epithelial cell proliferation GO:0055003P:cardiac myofibril assembly GO:0060347P:heart trabecula formation GO:0060973P:cell migration involved in heart development GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005524F:ATP binding GO:0008288F:boss receptor activity GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0005634C:nucleus GO:0005769C:early endosome GO:0009925C:basal plasma membrane GO:0032587C:ruffle membrane GO:0043235C:receptor complex GO:0048471C:perinuclear region of cytoplasm |
EC:EC:2.7.10.1 |
| 18847 |
SRR953582_primary_scf7180001924236_1-1090
Len: 1,089 bp
E-val: 3.6E-72
|
KTF91231.1hypothetical protein cypCar_00026999
|
GO:0006812P:monoatomic cation transport GO:0007212P:G protein-coupled dopamine receptor signaling pathway GO:0007267P:cell-cell signaling GO:0007601P:visual perception GO:0032732P:positive regulation of interleukin-1 production GO:0034220P:monoatomic ion transmembrane transport GO:0022832F:voltage-gated channel activity GO:0055077F:gap junction hemi-channel activity GO:0005789C:endoplasmic reticulum membrane GO:0005921C:gap junction GO:0032587C:ruffle membrane |
- |
| 18848 |
SRR953582_primary_scf7180001924277_1-2597
Len: 2,596 bp
E-val: 0.0
|
KTF81841.1hypothetical protein cypCar_00015621
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007420P:brain development GO:2000171P:negative regulation of dendrite development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
- |
| 18849 |
SRR953582_primary_scf7180001924301_1-1851
Len: 1,850 bp
E-val: 1.5E-33
|
XP_018959377.1PREDICTED: trichoplein keratin filament-binding protein-like, partial
Acting on peptide bonds (peptidases)
|
GO:0006508P:proteolysis GO:0006915P:apoptotic process GO:0004197F:cysteine-type endopeptidase activity GO:0005737C:cytoplasm GO:0005813C:centrosome GO:0045095C:keratin filament |
EC:EC:3.4.22 |
| 18850 |
SRR953582_primary_scf7180001924346_66-2924
Len: 2,858 bp
E-val: 1.1E-64
|
XP_016122966.1PREDICTED: synaptic vesicle glycoprotein 2B-like
|
GO:0110165C:cellular anatomical structure |
- |