Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 19201 |
SRR953582_primary_scf7180001942452_968-3175
Len: 2,207 bp
E-val: 7.8E-18
|
XP_016336272.1PREDICTED: nuclear receptor corepressor 2-like
|
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0030223P:neutrophil differentiation GO:0030225P:macrophage differentiation GO:0060218P:hematopoietic stem cell differentiation GO:0003714F:transcription corepressor activity GO:0000785C:chromatin GO:0005654C:nucleoplasm GO:0032991C:protein-containing complex |
- |
| 19202 |
SRR953582_primary_scf7180001942457_2016-4516
Len: 2,500 bp
E-val: 3.9E-122
|
KTF90243.1hypothetical protein cypCar_00015442, partial
|
GO:0008150P:biological_process GO:0003674F:molecular_function GO:0005198F:structural molecule activity GO:0005856C:cytoskeleton GO:0005882C:intermediate filament |
- |
| 19203 |
SRR953582_primary_scf7180001942460_1-7073
Len: 7,072 bp
E-val: 1.4E-84
|
XP_026062252.1nucleoprotein TPR-like
|
GO:0006406P:mRNA export from nucleus GO:0006606P:protein import into nucleus GO:1901673P:regulation of mitotic spindle assembly GO:0017056F:structural constituent of nuclear pore GO:0005634C:nucleus GO:0005635C:nuclear envelope GO:0005643C:nuclear pore |
- |
| 19204 |
SRR953582_primary_scf7180001942469_1124-2893
Len: 1,769 bp
E-val: 0.0
|
XP_018980159.1PREDICTED: secretogranin-2-like isoform X1
|
GO:0005576C:extracellular region GO:0030141C:secretory granule |
- |
| 19205 |
SRR953582_primary_scf7180001942475_568-4239
Len: 3,671 bp
E-val: 1.1E-290
|
XP_018920374.1PREDICTED: protein Wiz-like
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009253P:peptidoglycan catabolic process GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0008745F:N-acetylmuramoyl-L-alanine amidase activity GO:0005634C:nucleus GO:0016020C:membrane |
- |
| 19206 |
SRR953582_primary_scf7180001942503_1394-6560
Len: 5,166 bp
E-val: 9.0E-166
|
KTF83184.1hypothetical protein cypCar_00038150, partial
|
GO:0001508P:action potential GO:0051260P:protein homooligomerization GO:0071805P:potassium ion transmembrane transport GO:0005251F:delayed rectifier potassium channel activity GO:0008076C:voltage-gated potassium channel complex GO:0032590C:dendrite membrane GO:0032809C:neuronal cell body membrane GO:0042734C:presynaptic membrane GO:0043679C:axon terminus GO:0045211C:postsynaptic membrane |
- |
| 19207 |
SRR953582_primary_scf7180001942508_2567-3718
Len: 1,151 bp
E-val: 7.8E-211
|
KTG01871.1hypothetical protein cypCar_00026412, partial
|
GO:0050804P:modulation of chemical synaptic transmission GO:0060090F:molecular adaptor activity GO:0005886C:plasma membrane GO:0014069C:postsynaptic density GO:0098978C:glutamatergic synapse |
- |
| 19208 |
SRR953582_primary_scf7180001942519_1-6178
Len: 6,177 bp
E-val: 3.1E-197
|
XP_016100734.1PREDICTED: LOW QUALITY PROTEIN: filamin-A-like
|
GO:0007399P:nervous system development GO:0030036P:actin cytoskeleton organization GO:0030432P:peristalsis GO:0048565P:digestive tract development GO:0120054P:intestinal motility GO:0003779F:actin binding GO:0051015F:actin filament binding GO:0016020C:membrane GO:0043232C:intracellular membraneless organelle |
- |
| 19209 |
SRR953582_primary_scf7180001942525_1839-4623
Len: 2,784 bp
E-val: 0.0
|
XP_026129006.1A-kinase anchor protein 2-like isoform X5
|
GO:0008360P:regulation of cell shape GO:0005886C:plasma membrane |
- |
| 19210 |
SRR953582_primary_scf7180001942532_1399-3837
Len: 2,438 bp
E-val: 5.2E-31
|
XP_018956013.1PREDICTED: PDZ and LIM domain protein 2-like
|
GO:0007507P:heart development GO:0030036P:actin cytoskeleton organization GO:0061061P:muscle structure development GO:0003779F:actin binding GO:0046872F:metal ion binding GO:0051371F:muscle alpha-actinin binding GO:0001725C:stress fiber GO:0005912C:adherens junction GO:0030018C:Z disc GO:0031941C:filamentous actin |
- |
| 19211 |
SRR953582_primary_scf7180001942534_169-4152
Len: 3,983 bp
E-val: 8.7E-92
|
KTG35743.1hypothetical protein cypCar_00041748
|
GO:0009266P:response to temperature stimulus GO:0009416P:response to light stimulus GO:0032922P:circadian regulation of gene expression GO:0043153P:entrainment of circadian clock by photoperiod GO:0045892P:negative regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0071949F:FAD binding GO:0005634C:nucleus GO:0005667C:transcription regulator complex GO:0005737C:cytoplasm |
- |
| 19212 |
SRR953582_primary_scf7180001942535_2213-4603
Len: 2,390 bp
E-val: 3.9E-55
|
XP_026058961.1excitatory amino acid transporter 2-like isoform X1
|
GO:0006865P:amino acid transport GO:0022857F:transmembrane transporter activity |
- |
| 19213 |
SRR953582_primary_scf7180001942536_1-2064
Len: 2,063 bp
E-val: 1.2E-283
|
XP_018976205.1PREDICTED: vasorin-like
|
GO:0050919P:negative chemotaxis GO:0008201F:heparin binding GO:0048495F:Roundabout binding GO:0005615C:extracellular space GO:0005886C:plasma membrane |
- |
| 19214 |
SRR953582_primary_scf7180001942544_1375-4228
Len: 2,853 bp
E-val: 9.0E-99
|
KTG38953.1hypothetical protein cypCar_00013987
|
- | |
| 19215 |
SRR953582_primary_scf7180001942568_1-4593
Len: 4,592 bp
E-val: 2.7E-222
|
KTF99996.1hypothetical protein cypCar_00023246, partial
|
GO:0007155P:cell adhesion GO:0007156P:homophilic cell-cell adhesion GO:0009653P:anatomical structure morphogenesis GO:0016477P:cell migration GO:0098609P:cell-cell adhesion GO:0098742P:obsolete cell-cell adhesion via plasma-membrane adhesion molecules GO:0005509F:calcium ion binding GO:0008013F:beta-catenin binding GO:0045296F:cadherin binding GO:0005886C:plasma membrane GO:0005911C:cell-cell junction GO:0016020C:membrane GO:0016342C:catenin complex |
- |
| 19216 |
SRR953582_primary_scf7180001942598_1-1214
Len: 1,213 bp
E-val: 4.2E-13
|
KTF93085.1hypothetical protein cypCar_00009498
Oxidoreductases
|
GO:0016491F:oxidoreductase activity GO:0016020C:membrane |
EC:EC:1 |
| 19217 |
SRR953582_primary_scf7180001942598_3056-6999
Len: 3,943 bp
E-val: 9.9E-197
|
KTF93090.1hypothetical protein cypCar_00009497
|
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0045892P:negative regulation of DNA-templated transcription GO:0003714F:transcription corepressor activity GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0070822C:Sin3-type complex |
- |
| 19218 |
SRR953582_primary_scf7180001942621_1-3633
Len: 3,632 bp
E-val: 5.0E-38
|
KTG06085.1hypothetical protein cypCar_00000610, partial
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007399P:nervous system development GO:0003690F:double-stranded DNA binding GO:0003712F:transcription coregulator activity GO:0005634C:nucleus |
- |
| 19219 |
SRR953582_primary_scf7180001942626_1-7650
Len: 7,649 bp
E-val: 1.1E-29
|
CAF95025.1unnamed protein product, partial
|
GO:0048513P:animal organ development GO:0048731P:system development GO:0050794P:regulation of cellular process |
- |
| 19220 |
SRR953582_primary_scf7180001942658_1-4352
Len: 4,351 bp
E-val: 6.5E-16
|
XP_026055413.1beta-catenin-like protein 1
|
GO:0005681C:spliceosomal complex |
- |
| 19221 |
SRR953582_primary_scf7180001942665_1-2981
Len: 2,980 bp
E-val: 1.7E-15
|
XP_027025108.1E3 ubiquitin-protein ligase RNF220 isoform X6
Acyltransferases
|
GO:0016567P:protein ubiquitination GO:0008270F:zinc ion binding GO:0061630F:ubiquitin protein ligase activity |
EC:EC:2.3.2 |
| 19222 |
SRR953582_primary_scf7180001942676_1-5349
Len: 5,348 bp
E-val: 2.5E-41
|
XP_018922364.1PREDICTED: coagulation factor XIII A chain-like
protein-glutamine gamma-glutamyltransferase
|
GO:0006915P:apoptotic process GO:0007399P:nervous system development GO:0072378P:blood coagulation, fibrin clot formation GO:0003810F:protein-glutamine gamma-glutamyltransferase activity GO:0046872F:metal ion binding |
EC:EC:2.3.2.13 |
| 19223 |
SRR953582_primary_scf7180001942694_1-5084
Len: 5,083 bp
E-val: 2.9E-60
|
ROL42694.1Mitogen-activated protein kinase kinase kinase 15
|
GO:0000165P:MAPK cascade GO:0016192P:vesicle-mediated transport GO:0033554P:cellular response to stress GO:0033572P:transferrin transport GO:0004672F:protein kinase activity GO:0004674F:protein serine/threonine kinase activity GO:0004706F:JUN kinase kinase kinase activity GO:0004709F:MAP kinase kinase kinase activity GO:0004998F:transferrin receptor activity GO:0005524F:ATP binding GO:0046872F:metal ion binding GO:0005886C:plasma membrane |
- |
| 19224 |
SRR953582_primary_scf7180001942728_1-3760
Len: 3,759 bp
E-val: 2.7E-87
|
KTG35135.1hypothetical protein cypCar_00006755
|
GO:0016973P:poly(A)+ mRNA export from nucleus GO:0003676F:nucleic acid binding GO:0003724F:RNA helicase activity GO:0003729F:mRNA binding GO:0004386F:helicase activity GO:0005515F:protein binding GO:0005524F:ATP binding GO:0016787F:hydrolase activity GO:0005634C:nucleus GO:0010494C:cytoplasmic stress granule |
- |
| 19225 |
SRR953582_primary_scf7180001942729_122-3840
Len: 3,718 bp
E-val: 1.3E-52
|
XP_018952964.1PREDICTED: V-set and transmembrane domain-containing protein 5 isoform X1
|
GO:0006955P:immune response GO:0046847P:filopodium assembly GO:1904891P:positive regulation of excitatory synapse assembly GO:0005886C:plasma membrane GO:0030424C:axon GO:0030425C:dendrite |
- |