Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 1901 |
SRR924327_primary_scf7180002354898_1-797
Len: 796 bp
E-val: 6.5E-31
|
XP_016320873.1PREDICTED: matrix metalloproteinase-23-like
|
GO:0001889P:liver development GO:0006508P:proteolysis GO:0030198P:extracellular matrix organization GO:0030574P:collagen catabolic process GO:0004222F:metalloendopeptidase activity GO:0008233F:peptidase activity GO:0008237F:metallopeptidase activity GO:0008270F:zinc ion binding GO:0046872F:metal ion binding GO:0005615C:extracellular space GO:0031012C:extracellular matrix |
- |
| 1902 |
SRR924327_primary_scf7180002355256_1-943
Len: 942 bp
E-val: 1.8E-24
|
XP_016431305.1PREDICTED: poly [ADP-ribose] polymerase 12-like
NAD(+) ADP-ribosyltransferase
|
GO:0003950F:NAD+ poly-ADP-ribosyltransferase activity GO:0008270F:zinc ion binding GO:0005634C:nucleus |
EC:EC:2.4.2.30 |
| 1903 |
SRR924327_primary_scf7180002355266_294-880
Len: 586 bp
E-val: 1.4E-43
|
KTG01780.1hypothetical protein cypCar_00026214
Intramolecular transferases
|
GO:0031119P:tRNA pseudouridine synthesis GO:1990481P:mRNA pseudouridine synthesis GO:0003723F:RNA binding GO:0009982F:pseudouridine synthase activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
EC:EC:5.4 |
| 1904 |
SRR924327_primary_scf7180002355509_1-752
Len: 751 bp
E-val: 1.4E-22
|
XP_016100996.1PREDICTED: von Willebrand factor A domain-containing protein 5A-like
|
-
|
- |
| 1905 |
SRR924327_primary_scf7180002355669_1-1087
Len: 1,086 bp
E-val: 8.6E-135
|
XP_018939473.1PREDICTED: LOW QUALITY PROTEIN: PR domain zinc finger protein 4-like
Transferases
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0016740F:transferase activity GO:1990226F:histone methyltransferase binding GO:0005634C:nucleus |
EC:EC:2 |
| 1906 |
SRR924327_primary_scf7180002355712_1-910
Len: 909 bp
E-val: 1.3E-14
|
XP_018924766.1PREDICTED: golgin subfamily A member 2-like
|
GO:0001966P:thigmotaxis GO:0007030P:Golgi organization GO:0007420P:brain development GO:0007519P:skeletal muscle tissue development GO:0015031P:protein transport GO:0051301P:cell division GO:0000137C:Golgi cis cisterna GO:0000922C:spindle pole GO:0005801C:cis-Golgi network GO:0005874C:microtubule GO:0032580C:Golgi cisterna membrane GO:0033116C:endoplasmic reticulum-Golgi intermediate compartment membrane |
- |
| 1907 |
SRR924327_primary_scf7180002355728_1-920
Len: 919 bp
E-val: 1.1E-42
|
XP_018941668.1PREDICTED: LOW QUALITY PROTEIN: talin-1-like, partial
|
GO:0030036P:actin cytoskeleton organization GO:0098609P:cell-cell adhesion GO:0005178F:integrin binding GO:0005200F:structural constituent of cytoskeleton GO:0051015F:actin filament binding GO:0001726C:ruffle GO:0005737C:cytoplasm GO:0005856C:cytoskeleton GO:0005886C:plasma membrane GO:0005925C:focal adhesion |
- |
| 1908 |
SRR924327_primary_scf7180002355924_1-1133
Len: 1,132 bp
E-val: 3.0E-37
|
XP_016371823.1PREDICTED: DNA damage-binding protein 1
|
GO:0006281P:DNA repair GO:0010564P:regulation of cell cycle process GO:0043066P:negative regulation of apoptotic process GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0005634C:nucleus GO:0035861C:site of double-strand break |
- |
| 1909 |
SRR924327_primary_scf7180002356153_443-799
Len: 356 bp
E-val: 6.4E-55
|
KTG05182.1hypothetical protein cypCar_00024883
|
GO:0001706P:endoderm formation GO:0003323P:type B pancreatic cell development GO:0006357P:regulation of transcription by RNA polymerase II GO:0021575P:hindbrain morphogenesis GO:0021664P:rhombomere 5 morphogenesis GO:0021667P:rhombomere 6 morphogenesis GO:0030073P:insulin secretion GO:0032474P:otolith morphogenesis GO:0034672P:anterior/posterior pattern specification involved in pronephros development GO:0035622P:intrahepatic bile duct development GO:0042593P:glucose homeostasis GO:0043049P:otic placode formation GO:0045893P:positive regulation of DNA-templated transcription GO:0048546P:digestive tract morphogenesis GO:0048566P:embryonic digestive tract development GO:0048752P:semicircular canal morphogenesis GO:0072576P:liver morphogenesis GO:1990798P:pancreas regeneration GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0046983F:protein dimerization activity GO:0005634C:nucleus |
- |
| 1910 |
SRR924327_primary_scf7180002356288_1-1226
Len: 1,225 bp
E-val: 9.9E-55
|
KTF91333.1hypothetical protein cypCar_00010469
Transferring one-carbon groups
|
GO:0006338P:chromatin remodeling GO:0010468P:regulation of gene expression GO:0048863P:stem cell differentiation GO:0003677F:DNA binding GO:0003682F:chromatin binding GO:0046976F:histone H3K27 methyltransferase activity GO:0000785C:chromatin GO:0035098C:ESC/E(Z) complex |
EC:EC:2.1.1 |
| 1911 |
SRR924327_primary_scf7180002356329_209-1166
Len: 957 bp
E-val: 4.7E-177
|
XP_018941108.1PREDICTED: C3a anaphylatoxin chemotactic receptor-like
|
GO:0006954P:inflammatory response GO:0007200P:phospholipase C-activating G protein-coupled receptor signaling pathway GO:0007204P:positive regulation of cytosolic calcium ion concentration GO:0038178P:complement component C5a signaling pathway GO:0004878F:complement component C5a receptor activity GO:0004930F:G protein-coupled receptor activity GO:0005886C:plasma membrane |
- |
| 1912 |
SRR924327_primary_scf7180002356938_1-500
Len: 499 bp
E-val: 1.6E-91
|
KTF81212.1hypothetical protein cypCar_00003030
|
GO:0007165P:signal transduction GO:0005096F:GTPase activator activity GO:0008270F:zinc ion binding GO:0005737C:cytoplasm GO:0005856C:cytoskeleton |
- |
| 1913 |
SRR924327_primary_scf7180002356954_1-1006
Len: 1,005 bp
E-val: 8.5E-12
|
XP_016349552.1PREDICTED: FH1/FH2 domain-containing protein 3-like
|
GO:0030866P:cortical actin cytoskeleton organization GO:0045214P:sarcomere organization GO:0055003P:cardiac myofibril assembly GO:0051015F:actin filament binding GO:0005737C:cytoplasm GO:0005856C:cytoskeleton |
- |
| 1914 |
SRR924327_primary_scf7180002357386_1-1381
Len: 1,380 bp
E-val: 2.8E-21
|
XP_026108561.1immunoglobulin superfamily member 21-like isoform X1
|
GO:0007156P:homophilic cell-cell adhesion GO:0007157P:heterophilic cell-cell adhesion GO:0005912C:adherens junction GO:0016020C:membrane |
- |
| 1915 |
SRR924327_primary_scf7180002357398_1-1480
Len: 1,479 bp
E-val: 4.4E-49
|
KTF92569.1hypothetical protein cypCar_00010914
nucleoside-triphosphate phosphatase
|
GO:0001755P:neural crest cell migration GO:0003006P:developmental process involved in reproduction GO:0006890P:retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum GO:0007264P:small GTPase-mediated signal transduction GO:0008045P:motor neuron axon guidance GO:0022412P:cellular process involved in reproduction in multicellular organism GO:0030335P:positive regulation of cell migration GO:0035006P:melanization defense response GO:0035099P:hemocyte migration GO:0050919P:negative chemotaxis GO:0071526P:semaphorin-plexin signaling pathway GO:0003924F:GTPase activity GO:0005525F:GTP binding GO:0030215F:semaphorin receptor binding GO:0038191F:neuropilin binding GO:0045499F:chemorepellent activity GO:0005615C:extracellular space GO:0005794C:Golgi apparatus GO:0005886C:plasma membrane GO:0030424C:axon GO:0098978C:glutamatergic synapse |
EC:EC:3.6.1.15 |
| 1916 |
SRR924327_primary_scf7180002357482_1-757
Len: 756 bp
E-val: 2.6E-13
|
XP_016359176.1PREDICTED: suppressor of tumorigenicity 14 protein homolog isoform X1
receptor protein-tyrosine kinase; Acting on peptide bonds (peptidases)
|
GO:0001525P:angiogenesis GO:0006508P:proteolysis GO:0006956P:complement activation GO:0007173P:epidermal growth factor receptor signaling pathway GO:0008286P:insulin receptor signaling pathway GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0004252F:serine-type endopeptidase activity GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005524F:ATP binding GO:0008288F:boss receptor activity GO:0019838F:growth factor binding GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0046872F:metal ion binding GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0005576C:extracellular region GO:0005886C:plasma membrane GO:0043235C:receptor complex |
EC:EC:2.7.10.1 EC:EC:3.4.21 |
| 1917 |
SRR924327_primary_scf7180002357721_265-1236
Len: 971 bp
E-val: 3.2E-72
|
XP_018928399.1PREDICTED: rho-related GTP-binding protein RhoU-like
nucleoside-triphosphate phosphatase
|
GO:0006897P:endocytosis GO:0007015P:actin filament organization GO:0007264P:small GTPase-mediated signal transduction GO:0030010P:establishment of cell polarity GO:0003924F:GTPase activity GO:0005525F:GTP binding GO:0019901F:protein kinase binding GO:0005886C:plasma membrane |
EC:EC:3.6.1.15 |
| 1918 |
SRR924327_primary_scf7180002357783_1-490
Len: 489 bp
E-val: 2.6E-22
|
XP_018948457.1PREDICTED: keratin, type I cytoskeletal 18-like
|
GO:0005198F:structural molecule activity GO:0005882C:intermediate filament |
- |
| 1919 |
SRR924327_primary_scf7180002357980_1-802
Len: 801 bp
E-val: 4.0E-28
|
XP_026085870.1visinin-like protein 1
|
GO:0009966P:regulation of signal transduction GO:0005509F:calcium ion binding |
- |
| 1920 |
SRR924327_primary_scf7180002358530_247-989
Len: 742 bp
E-val: 1.1E-29
|
XP_020334679.1elongation of very long chain fatty acids protein 5-like, partial
very-long-chain 3-oxoacyl-CoA synthase
|
GO:0006636P:unsaturated fatty acid biosynthetic process GO:0019367P:fatty acid elongation, saturated fatty acid GO:0030148P:sphingolipid biosynthetic process GO:0034625P:fatty acid elongation, monounsaturated fatty acid GO:0034626P:fatty acid elongation, polyunsaturated fatty acid GO:0035338P:long-chain fatty-acyl-CoA biosynthetic process GO:0042759P:long-chain fatty acid biosynthetic process GO:0042761P:very long-chain fatty acid biosynthetic process GO:0009922F:fatty acid elongase activity GO:0005789C:endoplasmic reticulum membrane GO:0005886C:plasma membrane GO:0030425C:dendrite |
EC:EC:2.3.1.199 |
| 1921 |
SRR924327_primary_scf7180002359084_1-923
Len: 922 bp
E-val: 4.0E-48
|
XP_018934519.1PREDICTED: uncharacterized protein CXorf57 homolog
|
GO:0006282P:regulation of DNA repair GO:0003697F:single-stranded DNA binding GO:0005657C:replication fork |
- |
| 1922 |
SRR924327_primary_scf7180002359454_36-1117
Len: 1,081 bp
E-val: 6.6E-87
|
XP_026066926.1retinal guanylyl cyclase 2-like isoform X1
Transferring phosphorus-containing groups; adenylate cyclase; guanylate cyclase
|
GO:0006182P:cGMP biosynthetic process GO:0007168P:receptor guanylyl cyclase signaling pathway GO:0007601P:visual perception GO:0035556P:intracellular signal transduction GO:0001653F:peptide receptor activity GO:0004016F:adenylate cyclase activity GO:0004383F:guanylate cyclase activity GO:0004672F:protein kinase activity GO:0005524F:ATP binding GO:0005525F:GTP binding GO:0005789C:endoplasmic reticulum membrane GO:0005886C:plasma membrane GO:0005929C:cilium |
EC:EC:2.7.1 EC:EC:4.6.1.1 EC:EC:4.6.1.2 |
| 1923 |
SRR924327_primary_scf7180002359698_1-571
Len: 570 bp
E-val: 1.1E-32
|
XP_018977058.1PREDICTED: cysteine-rich motor neuron 1 protein-like
|
GO:0001568P:blood vessel development GO:0001756P:somitogenesis GO:0048570P:notochord morphogenesis GO:0004867F:serine-type endopeptidase inhibitor activity GO:0005576C:extracellular region GO:0005886C:plasma membrane |
- |
| 1924 |
SRR924327_primary_scf7180002359751_397-766
Len: 369 bp
E-val: 4.3E-46
|
KTG03625.1hypothetical protein cypCar_00018159
Acting on peptide bonds (peptidases)
|
GO:0007217P:tachykinin receptor signaling pathway GO:1902093P:positive regulation of flagellated sperm motility GO:0004995F:tachykinin receptor activity GO:0008236F:serine-type peptidase activity GO:0005886C:plasma membrane GO:0097225C:sperm midpiece |
EC:EC:3.4 |
| 1925 |
SRR924327_primary_scf7180002359825_1-809
Len: 808 bp
E-val: 1.1E-30
|
XP_026117808.1protein unc-80 homolog isoform X5
|
GO:0055080P:monoatomic cation homeostasis GO:0098655P:monoatomic cation transmembrane transport GO:0005261F:monoatomic cation channel activity GO:0030424C:axon GO:0034703C:cation channel complex |
- |