Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 19876 |
SRR953582_primary_scf7180001950868_864-2198
Len: 1,334 bp
E-val: 1.2E-125
|
XP_018969802.1PREDICTED: homeobox protein MSH-C-like
|
GO:0043049P:otic placode formation |
- |
| 19877 |
SRR953582_primary_scf7180001950870_1874-2322
Len: 448 bp
E-val: 2.6E-45
|
XP_016355503.1PREDICTED: serine/threonine-protein kinase N2-like
protein kinase C
|
GO:0034220P:monoatomic ion transmembrane transport GO:0035556P:intracellular signal transduction GO:0004698F:calcium,diacylglycerol-dependent serine/threonine kinase activity GO:0004699F:diacylglycerol-dependent, calcium-independent serine/threonine kinase activity GO:0005524F:ATP binding GO:0031267F:small GTPase binding GO:0046872F:metal ion binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0030496C:midbody GO:0032154C:cleavage furrow |
EC:EC:2.7.11.13 |
| 19878 |
SRR953582_primary_scf7180001950895_1872-2705
Len: 833 bp
E-val: 1.7E-13
|
XP_016122563.1PREDICTED: inosine triphosphate pyrophosphatase-like
XTP/dITP diphosphatase; nucleotide diphosphatase
|
GO:0009117P:nucleotide metabolic process GO:0009204P:deoxyribonucleoside triphosphate catabolic process GO:0000166F:nucleotide binding GO:0035870F:dITP diphosphatase activity GO:0036220F:ITP diphosphatase activity GO:0036222F:XTP diphosphatase activity GO:0046872F:metal ion binding GO:0106379F:8-oxo-(d)RTP hydrolase activity GO:0005737C:cytoplasm |
EC:EC:3.6.1.66 EC:EC:3.6.1.9 |
| 19879 |
SRR953582_primary_scf7180001950897_1416-1712
Len: 296 bp
E-val: 1.3E-29
|
XP_016332538.1PREDICTED: aryl-hydrocarbon-interacting protein-like 1
peptidylprolyl isomerase
|
GO:0006367P:transcription initiation at RNA polymerase II promoter GO:0003755F:peptidyl-prolyl cis-trans isomerase activity GO:0005669C:transcription factor TFIID complex |
EC:EC:5.2.1.8 |
| 19880 |
SRR953582_primary_scf7180001950907_2522-3513
Len: 991 bp
E-val: 1.1E-115
|
XP_018932279.1PREDICTED: leucine-rich repeat-containing protein 17-like
|
GO:0005886C:plasma membrane |
- |
| 19881 |
SRR953582_primary_scf7180001950914_1-3088
Len: 3,087 bp
E-val: 9.2E-65
|
KTG31302.1hypothetical protein cypCar_00013142, partial
|
GO:0007155P:cell adhesion GO:0005886C:plasma membrane GO:0016020C:membrane GO:0043005C:neuron projection |
- |
| 19882 |
SRR953582_primary_scf7180001950916_231-2316
Len: 2,085 bp
E-val: 9.3E-53
|
XP_018925100.1PREDICTED: probable phospholipid-transporting ATPase VD
|
GO:0015914P:phospholipid transport GO:0045332P:phospholipid translocation GO:0000287F:magnesium ion binding GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0046872F:metal ion binding GO:0140326F:ATPase-coupled intramembrane lipid transporter activity GO:0005886C:plasma membrane GO:0016020C:membrane |
- |
| 19883 |
SRR953582_primary_scf7180001950942_307-2927
Len: 2,620 bp
E-val: 1.8E-45
|
KTF73277.1hypothetical protein cypCar_00035353
|
GO:0008203P:cholesterol metabolic process GO:0015918P:sterol transport GO:0030299P:intestinal cholesterol absorption GO:0030301P:cholesterol transport GO:0042632P:cholesterol homeostasis GO:0005319F:lipid transporter activity GO:0015485F:cholesterol binding GO:0005886C:plasma membrane GO:0012505C:endomembrane system GO:0016020C:membrane |
- |
| 19884 |
SRR953582_primary_scf7180001950946_538-1405
Len: 867 bp
E-val: 4.3E-52
|
XP_018950331.1PREDICTED: DNA polymerase theta-like isoform X1
DNA-directed DNA polymerase
|
GO:0006261P:DNA-templated DNA replication GO:0071897P:DNA biosynthetic process GO:0097681P:double-strand break repair via alternative nonhomologous end joining GO:0003677F:DNA binding GO:0003887F:DNA-directed DNA polymerase activity GO:0005524F:ATP binding |
EC:EC:2.7.7.7 |
| 19885 |
SRR953582_primary_scf7180001950966_136-3127
Len: 2,991 bp
E-val: 4.3E-19
|
XP_016389233.1PREDICTED: retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma-like
3',5'-cyclic-nucleotide phosphodiesterase; 3',5'-cyclic-GMP phosphodiesterase; 3',5'-cyclic-AMP phosphodiesterase
|
GO:0007601P:visual perception GO:0045742P:positive regulation of epidermal growth factor receptor signaling pathway GO:0045745P:positive regulation of G protein-coupled receptor signaling pathway GO:0004117F:calmodulin-activated dual specificity 3',5'-cyclic-GMP, 3',5'-cyclic-AMP phosphodiesterase activity GO:0030553F:cGMP binding GO:0048101F:calmodulin-activated 3',5'-cyclic-GMP phosphodiesterase activity GO:0042622C:photoreceptor outer segment membrane |
EC:EC:3.1.4.17 EC:EC:3.1.4.35 EC:EC:3.1.4.53 |
| 19886 |
SRR953582_primary_scf7180001950967_1-3014
Len: 3,013 bp
E-val: 1.1E-65
|
XP_016112159.1PREDICTED: matrix metalloproteinase-19-like isoform X1
|
GO:0009987P:cellular process |
- |
| 19887 |
SRR953582_primary_scf7180001951012_1003-2764
Len: 1,761 bp
E-val: 1.4E-46
|
XP_018956787.1PREDICTED: LOW QUALITY PROTEIN: dynactin subunit 1-like
|
GO:0051649P:establishment of localization in cell GO:0051656P:establishment of organelle localization GO:0005819C:spindle GO:0005875C:microtubule associated complex GO:0099080C:supramolecular complex |
- |
| 19888 |
SRR953582_primary_scf7180001951016_1-3087
Len: 3,086 bp
E-val: 1.6E-48
|
KTF79470.1hypothetical protein cypCar_00028069
|
GO:0001522P:pseudouridine synthesis GO:0008033P:tRNA processing GO:0031119P:tRNA pseudouridine synthesis GO:0003723F:RNA binding GO:0009982F:pseudouridine synthase activity GO:0016853F:isomerase activity GO:0160148F:tRNA pseudouridine(55) synthase activity GO:0005575C:cellular_component |
- |
| 19889 |
SRR953582_primary_scf7180001951033_469-1707
Len: 1,238 bp
E-val: 7.7E-31
|
KTF77621.1hypothetical protein cypCar_00015112
|
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0003714F:transcription corepressor activity GO:0046966F:nuclear thyroid hormone receptor binding GO:0000785C:chromatin GO:0005654C:nucleoplasm GO:0032991C:protein-containing complex |
- |
| 19890 |
SRR953582_primary_scf7180001951078_1-3105
Len: 3,104 bp
E-val: 5.3E-246
|
XP_018968730.1PREDICTED: DNA cross-link repair 1A protein isoform X1
Acting on ester bonds
|
GO:0006303P:double-strand break repair via nonhomologous end joining GO:0036297P:interstrand cross-link repair GO:0003684F:damaged DNA binding GO:0008270F:zinc ion binding GO:0035312F:5'-3' DNA exonuclease activity GO:0005634C:nucleus |
EC:EC:3.1.11 |
| 19891 |
SRR953582_primary_scf7180001951100_1-3528
Len: 3,527 bp
E-val: 9.2E-37
|
XP_016111302.1PREDICTED: ephrin type-B receptor 3-like
receptor protein-tyrosine kinase
|
GO:0007173P:epidermal growth factor receptor signaling pathway GO:0007411P:axon guidance GO:0008286P:insulin receptor signaling pathway GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005524F:ATP binding GO:0008288F:boss receptor activity GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0005886C:plasma membrane GO:0030425C:dendrite |
EC:EC:2.7.10.1 |
| 19892 |
SRR953582_primary_scf7180001951112_333-4065
Len: 3,732 bp
E-val: 2.4E-75
|
KTG04144.1hypothetical protein cypCar_00003871
|
GO:0006325P:chromatin organization GO:0003824F:catalytic activity GO:0005488F:binding GO:0005634C:nucleus |
- |
| 19893 |
SRR953582_primary_scf7180001951131_1-3462
Len: 3,461 bp
E-val: 1.4E-82
|
XP_018937205.1PREDICTED: LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 13C-like
|
GO:0006623P:protein targeting to vacuole GO:0006869P:lipid transport GO:0007005P:mitochondrion organization GO:0045053P:protein retention in Golgi apparatus |
- |
| 19894 |
SRR953582_primary_scf7180001951148_1-3341
Len: 3,340 bp
E-val:
|
-
|
-
|
- |
| 19895 |
SRR953582_primary_scf7180001951172_1-2006
Len: 2,005 bp
E-val: 1.7E-11
|
XP_018954352.1PREDICTED: LOW QUALITY PROTEIN: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4-like
phosphoinositide phospholipase C
|
GO:0016042P:lipid catabolic process GO:0046488P:phosphatidylinositol metabolic process GO:0048015P:phosphatidylinositol-mediated signaling GO:0051209P:release of sequestered calcium ion into cytosol GO:0004435F:phosphatidylinositol-4,5-bisphosphate phospholipase C activity GO:0005509F:calcium ion binding |
EC:EC:3.1.4.11 |
| 19896 |
SRR953582_primary_scf7180001951188_1-2482
Len: 2,481 bp
E-val: 3.1E-23
|
XP_017539872.1PREDICTED: exocyst complex component 6 isoform X1
|
GO:0006886P:intracellular protein transport GO:0006887P:exocytosis GO:0006893P:Golgi to plasma membrane transport GO:0090522P:vesicle tethering involved in exocytosis GO:0003674F:molecular_function GO:0000145C:exocyst GO:0016020C:membrane |
- |
| 19897 |
SRR953582_primary_scf7180001951189_248-1948
Len: 1,700 bp
E-val: 2.4E-46
|
XP_016422672.1PREDICTED: lysine-specific demethylase 5B-B-like isoform X1
|
GO:0006325P:chromatin organization GO:0006338P:chromatin remodeling GO:0006355P:regulation of DNA-templated transcription GO:0032259P:methylation GO:0003677F:DNA binding GO:0008168F:methyltransferase activity GO:0008270F:zinc ion binding GO:0034647F:histone H3K4me/H3K4me2/H3K4me3 demethylase activity GO:0051213F:dioxygenase activity GO:0000785C:chromatin GO:0005634C:nucleus |
- |
| 19898 |
SRR953582_primary_scf7180001951219_1-2059
Len: 2,058 bp
E-val: 2.2E-147
|
XP_018934264.1PREDICTED: protein O-mannose kinase-like
Transferring phosphorus-containing groups
|
GO:0006493P:protein O-linked glycosylation GO:0036268P:swimming GO:0046835P:carbohydrate phosphorylation GO:0061061P:muscle structure development GO:0004713F:protein tyrosine kinase activity GO:0005524F:ATP binding GO:0019200F:carbohydrate kinase activity GO:0030247F:polysaccharide binding GO:0043531F:ADP binding GO:0005789C:endoplasmic reticulum membrane |
EC:EC:2.7.10 |
| 19899 |
SRR953582_primary_scf7180001951221_1-2818
Len: 2,817 bp
E-val: 9.9E-50
|
XP_018948133.1PREDICTED: stabilin-1-like
|
GO:0034383P:low-density lipoprotein particle clearance GO:0042632P:cholesterol homeostasis GO:0090118P:receptor-mediated endocytosis involved in cholesterol transport GO:0150024P:oxidised low-density lipoprotein particle clearance GO:1901492P:positive regulation of lymphangiogenesis GO:0005044F:scavenger receptor activity |
- |
| 19900 |
SRR953582_primary_scf7180001951234_1-2136
Len: 2,135 bp
E-val: 2.8E-97
|
XP_018958401.1PREDICTED: LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 2-like
|
GO:0051693P:actin filament capping GO:0003779F:actin binding GO:0005200F:structural constituent of cytoskeleton GO:0005543F:phospholipid binding GO:0008091C:spectrin GO:0016020C:membrane |
- |