Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 20576 |
SRR953582_primary_scf7180001968032_1-1637
Len: 1,636 bp
E-val: 4.2E-16
|
XP_003966774.1PREDICTED: rap1 GTPase-GDP dissociation stimulator 1 isoform X1
|
GO:0048513P:animal organ development GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005739C:mitochondrion GO:0005783C:endoplasmic reticulum GO:0005829C:cytosol |
- |
| 20577 |
SRR953582_primary_scf7180001968050_1-1983
Len: 1,982 bp
E-val: 2.2E-59
|
KTF72480.1hypothetical protein cypCar_00034213
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007346P:regulation of mitotic cell cycle GO:0030901P:midbrain development GO:0050767P:regulation of neurogenesis GO:0061074P:regulation of neural retina development GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
- |
| 20578 |
SRR953582_primary_scf7180001968070_172-1371
Len: 1,199 bp
E-val: 1.0E-27
|
XP_018953430.1PREDICTED: protein tyrosine phosphatase domain-containing protein 1-like
protein-tyrosine-phosphatase
|
GO:0009888P:tissue development GO:0030182P:neuron differentiation GO:0045165P:cell fate commitment GO:0046330P:positive regulation of JNK cascade GO:0048513P:animal organ development GO:0060070P:canonical Wnt signaling pathway GO:0060271P:cilium assembly GO:0004725F:protein tyrosine phosphatase activity GO:0005109F:frizzled binding GO:0005125F:cytokine activity GO:0005615C:extracellular space GO:0012505C:endomembrane system GO:0016020C:membrane |
EC:EC:3.1.3.48 |
| 20579 |
SRR953582_primary_scf7180001968071_1-2431
Len: 2,430 bp
E-val: 6.1E-56
|
XP_018940971.1PREDICTED: low-density lipoprotein receptor-related protein 2-like
|
GO:0003094P:glomerular filtration GO:0007507P:heart development GO:0048259P:regulation of receptor-mediated endocytosis GO:0070293P:renal absorption GO:0042562F:hormone binding GO:0016324C:apical plasma membrane GO:0043235C:receptor complex |
- |
| 20580 |
SRR953582_primary_scf7180001968076_1-1902
Len: 1,901 bp
E-val: 3.9E-58
|
KTG34057.1hypothetical protein cypCar_00027592
|
GO:1903457P:lactate catabolic process GO:0003824F:catalytic activity GO:0004458F:D-lactate dehydrogenase (cytochrome) activity GO:0008720F:D-lactate dehydrogenase (NAD+) activity GO:0016491F:oxidoreductase activity GO:0050660F:flavin adenine dinucleotide binding GO:0071949F:FAD binding GO:0005739C:mitochondrion |
- |
| 20581 |
SRR953582_primary_scf7180001968100_752-1539
Len: 787 bp
E-val: 3.9E-52
|
XP_018980272.1PREDICTED: apolipoprotein A-IV-like
|
GO:0008203P:cholesterol metabolic process GO:0033344P:cholesterol efflux GO:0033700P:phospholipid efflux GO:0042157P:lipoprotein metabolic process GO:0055090P:acylglycerol homeostasis GO:0005543F:phospholipid binding GO:0060228F:phosphatidylcholine-sterol O-acyltransferase activator activity GO:0120020F:cholesterol transfer activity GO:0034361C:very-low-density lipoprotein particle GO:0034362C:low-density lipoprotein particle GO:0034364C:high-density lipoprotein particle GO:0042627C:chylomicron GO:1903561C:extracellular vesicle |
- |
| 20582 |
SRR953582_primary_scf7180001968106_1-2238
Len: 2,237 bp
E-val: 3.9E-33
|
XP_016150888.1PREDICTED: excitatory amino acid transporter 5-like
|
GO:0015804P:neutral amino acid transport GO:0015813P:L-glutamate transmembrane transport GO:0005313F:L-glutamate transmembrane transporter activity GO:0015175F:neutral L-amino acid transmembrane transporter activity GO:0015501F:glutamate:sodium symporter activity GO:0005886C:plasma membrane |
- |
| 20583 |
SRR953582_primary_scf7180001968175_1-1047
Len: 1,046 bp
E-val: 1.7E-31
|
KTG37170.1hypothetical protein cypCar_00029498
|
GO:0006913P:nucleocytoplasmic transport GO:0015031P:protein transport |
- |
| 20584 |
SRR953582_primary_scf7180001968223_866-1504
Len: 638 bp
E-val: 5.0E-18
|
RXN12459.1E3 ubiquitin-protein ligase RNF115-like protein
Acyltransferases
|
GO:0007368P:determination of left/right symmetry GO:0016567P:protein ubiquitination GO:0061630F:ubiquitin protein ligase activity GO:0005737C:cytoplasm |
EC:EC:2.3.2 |
| 20585 |
SRR953582_primary_scf7180001968332_1-1554
Len: 1,553 bp
E-val: 1.5E-15
|
XP_005160063.1storkhead-box protein 2 isoform X2
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000977F:RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
- |
| 20586 |
SRR953582_primary_scf7180001968336_1-1575
Len: 1,574 bp
E-val: 6.8E-40
|
XP_026095017.1insulin gene enhancer protein isl-2a-like isoform X4
|
GO:0003139P:secondary heart field specification GO:0007409P:axonogenesis GO:0031017P:exocrine pancreas development GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048665P:neuron fate specification GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000987F:cis-regulatory region sequence-specific DNA binding GO:0046872F:metal ion binding GO:0005634C:nucleus |
- |
| 20587 |
SRR953582_primary_scf7180001968354_1-2655
Len: 2,654 bp
E-val: 5.7E-140
|
KTF72113.1hypothetical protein cypCar_00043727, partial
Acting on peptide bonds (peptidases)
|
GO:0006508P:proteolysis GO:0031640P:killing of cells of another organism GO:0035821P:modulation of process of another organism GO:0008234F:cysteine-type peptidase activity GO:0090729F:toxin activity GO:0005576C:extracellular region |
EC:EC:3.4 |
| 20588 |
SRR953582_primary_scf7180001968380_1-1328
Len: 1,327 bp
E-val: 5.9E-29
|
XP_026145512.1NAD(P)H-hydrate epimerase
Isomerases
|
EC:EC:5 | |
| 20589 |
SRR953582_primary_scf7180001968429_1536-1948
Len: 412 bp
E-val: 3.3E-18
|
XP_018929154.1PREDICTED: protein S100-A1
|
GO:0002224P:toll-like receptor signaling pathway GO:0006954P:inflammatory response GO:0008016P:regulation of heart contraction GO:0005509F:calcium ion binding GO:0038023F:signaling receptor activity GO:0048306F:calcium-dependent protein binding GO:0005739C:mitochondrion GO:0005886C:plasma membrane GO:0016529C:sarcoplasmic reticulum |
- |
| 20590 |
SRR953582_primary_scf7180001968453_229-1736
Len: 1,507 bp
E-val: 2.0E-129
|
XP_018948740.1PREDICTED: lysosomal alpha-glucosidase-like
Glycosylases
|
GO:0090599F:alpha-glucosidase activity |
EC:EC:3.2.1 |
| 20591 |
SRR953582_primary_scf7180001968458_334-1962
Len: 1,628 bp
E-val: 3.2E-16
|
KTF76953.1hypothetical protein cypCar_00043748, partial
receptor protein serine/threonine kinase
|
GO:0006915P:apoptotic process GO:0007507P:heart development GO:0030154P:cell differentiation GO:0030509P:BMP signaling pathway GO:0032924P:activin receptor signaling pathway GO:0005025F:transforming growth factor beta receptor activity, type I GO:0005026F:transforming growth factor beta receptor activity, type II GO:0005515F:protein binding GO:0005524F:ATP binding GO:0016361F:activin receptor activity, type I GO:0016362F:activin receptor activity, type II GO:0046872F:metal ion binding GO:0070123F:transforming growth factor beta receptor activity, type III GO:0098821F:BMP receptor activity GO:0005886C:plasma membrane GO:0043235C:receptor complex GO:0045121C:membrane raft |
EC:EC:2.7.11.30 |
| 20592 |
SRR953582_primary_scf7180001968505_853-2102
Len: 1,249 bp
E-val: 4.6E-31
|
XP_018979034.1PREDICTED: protein-methionine sulfoxide oxidase mical2-like
F-actin monooxygenase
|
GO:0006887P:exocytosis GO:0003779F:actin binding GO:0046872F:metal ion binding GO:0071949F:FAD binding GO:0120501F:F-actin monooxygenase activity GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005856C:cytoskeleton |
EC:EC:1.14.13.225 |
| 20593 |
SRR953582_primary_scf7180001968569_1-2312
Len: 2,311 bp
E-val: 2.2E-132
|
KTF75224.1hypothetical protein cypCar_00031456, partial
|
GO:0007030P:Golgi organization GO:0032418P:lysosome localization GO:0032880P:regulation of protein localization GO:0019894F:kinesin binding GO:0046983F:protein dimerization activity GO:0005765C:lysosomal membrane GO:0005783C:endoplasmic reticulum GO:0010008C:endosome membrane |
- |
| 20594 |
SRR953582_primary_scf7180001968607_311-1298
Len: 987 bp
E-val: 9.4E-72
|
KTG36835.1hypothetical protein cypCar_00007884
|
GO:0006355P:regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0005634C:nucleus |
- |
| 20595 |
SRR953582_primary_scf7180001968678_1-2229
Len: 2,228 bp
E-val: 2.5E-32
|
KTG01921.1hypothetical protein cypCar_00025098
|
GO:0007268P:chemical synaptic transmission GO:0098703P:calcium ion import across plasma membrane GO:0008331F:high voltage-gated calcium channel activity GO:0046872F:metal ion binding GO:0005891C:voltage-gated calcium channel complex GO:0043025C:neuronal cell body GO:0045202C:synapse |
- |
| 20596 |
SRR953582_primary_scf7180001968797_1-1138
Len: 1,137 bp
E-val: 2.1E-115
|
XP_016402025.1PREDICTED: high affinity choline transporter 1-like
receptor protein-tyrosine kinase; nucleoside-triphosphate phosphatase
|
GO:0006814P:sodium ion transport GO:0007173P:epidermal growth factor receptor signaling pathway GO:0007271P:synaptic transmission, cholinergic GO:0007274P:neuromuscular synaptic transmission GO:0007411P:axon guidance GO:0008286P:insulin receptor signaling pathway GO:0008292P:acetylcholine biosynthetic process GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0015871P:choline transport GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0055085P:transmembrane transport GO:0003924F:GTPase activity GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005307F:choline:sodium symporter activity GO:0005524F:ATP binding GO:0005525F:GTP binding GO:0008288F:boss receptor activity GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0005886C:plasma membrane GO:0030424C:axon GO:0030425C:dendrite GO:0043204C:perikaryon GO:0045202C:synapse |
EC:EC:2.7.10.1 EC:EC:3.6.1.15 |
| 20597 |
SRR953582_primary_scf7180001968817_1074-1322
Len: 248 bp
E-val: 1.8E-32
|
KTG22889.1hypothetical protein cypCar_00018641
|
GO:0001503P:ossification GO:0002062P:chondrocyte differentiation GO:0009653P:anatomical structure morphogenesis GO:0030097P:hemopoiesis GO:0030182P:neuron differentiation GO:0045595P:regulation of cell differentiation GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0051094P:positive regulation of developmental process GO:0060429P:epithelium development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005524F:ATP binding GO:0005634C:nucleus |
- |
| 20598 |
SRR953582_primary_scf7180001968916_1-863
Len: 862 bp
E-val: 1.4E-63
|
KTF80990.1hypothetical protein cypCar_00028081
|
GO:0007218P:neuropeptide signaling pathway GO:0008188F:neuropeptide receptor activity GO:0005886C:plasma membrane |
- |
| 20599 |
SRR953582_primary_scf7180001968969_1-1075
Len: 1,074 bp
E-val: 6.3E-21
|
XP_018943135.1PREDICTED: semaphorin-6D-like
|
GO:0001569P:branching involved in blood vessel morphogenesis GO:0001755P:neural crest cell migration GO:0002072P:optic cup morphogenesis involved in camera-type eye development GO:0007411P:axon guidance GO:0030335P:positive regulation of cell migration GO:0050919P:negative chemotaxis GO:0071526P:semaphorin-plexin signaling pathway GO:0030215F:semaphorin receptor binding GO:0045499F:chemorepellent activity GO:0005886C:plasma membrane |
- |
| 20600 |
SRR953582_primary_scf7180001969181_1-1280
Len: 1,279 bp
E-val: 1.2E-37
|
KTG36594.1hypothetical protein cypCar_00026510
|
GO:0007018P:microtubule-based movement GO:0009794P:regulation of mitotic cell cycle, embryonic GO:0036372P:opsin transport GO:0060236P:regulation of mitotic spindle organization GO:0097474P:retinal cone cell apoptotic process GO:0005524F:ATP binding GO:0045504F:dynein heavy chain binding GO:0005737C:cytoplasm GO:0005813C:centrosome GO:0005868C:cytoplasmic dynein complex GO:0005874C:microtubule |
- |