Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 21426 |
SRR953582_primary_scf7180002010888_1-3198
Len: 3,197 bp
E-val: 1.5E-25
|
XP_026096725.1RNA polymerase II subunit A C-terminal domain phosphatase-like
protein-serine/threonine phosphatase
|
GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0017018F:myosin phosphatase activity GO:0033192F:calmodulin-dependent protein phosphatase activity GO:0140791F:histone H2AXS139 phosphatase activity GO:0180004F:RNA polymerase II CTD heptapeptide repeat Y1 phosphatase activity GO:0180005F:RNA polymerase II CTD heptapeptide repeat T4 phosphatase activity GO:0180006F:RNA polymerase II CTD heptapeptide repeat S2 phosphatase activity GO:0180007F:RNA polymerase II CTD heptapeptide repeat S5 phosphatase activity GO:0180008F:RNA polymerase II CTD heptapeptide repeat S7 phosphatase activity GO:1990439F:MAP kinase serine/threonine phosphatase activity GO:0005634C:nucleus |
EC:EC:3.1.3.16 |
| 21427 |
SRR953582_primary_scf7180002010895_1-2787
Len: 2,786 bp
E-val: 4.1E-96
|
ROL42644.1Zinc finger homeobox protein 4
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus |
- |
| 21428 |
SRR953582_primary_scf7180002010947_1-5252
Len: 5,251 bp
E-val: 5.4E-25
|
KTF89960.1hypothetical protein cypCar_00025834
|
GO:0051649P:establishment of localization in cell GO:0061590P:calcium activated phosphatidylcholine scrambling GO:0061591P:calcium activated galactosylceramide scrambling GO:1902476P:chloride transmembrane transport GO:0005254F:chloride channel activity GO:0017128F:phospholipid scramblase activity GO:0046983F:protein dimerization activity GO:0005886C:plasma membrane |
- |
| 21429 |
SRR953582_primary_scf7180002010951_1211-3089
Len: 1,878 bp
E-val: 4.8E-16
|
XP_017566381.1PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP1A-like
peptidylprolyl isomerase
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0140839F:RNA polymerase II CTD heptapeptide repeat P3 isomerase activity GO:0140840F:RNA polymerase II CTD heptapeptide repeat P6 isomerase activity GO:0033017C:sarcoplasmic reticulum membrane |
EC:EC:5.2.1.8 |
| 21430 |
SRR953582_primary_scf7180002010966_1256-2540
Len: 1,284 bp
E-val: 7.0E-35
|
XP_016087581.1PREDICTED: disks large homolog 3-like
|
GO:0001736P:establishment of planar polarity GO:0007268P:chemical synaptic transmission GO:0007399P:nervous system development GO:0008285P:negative regulation of cell population proliferation GO:0035418P:protein localization to synapse GO:0043113P:receptor clustering GO:0045197P:establishment or maintenance of epithelial cell apical/basal polarity GO:0097120P:receptor localization to synapse GO:0098609P:cell-cell adhesion GO:0099072P:regulation of postsynaptic membrane neurotransmitter receptor levels GO:0019901F:protein kinase binding GO:0019902F:phosphatase binding GO:0031625F:ubiquitin protein ligase binding GO:0035255F:ionotropic glutamate receptor binding GO:0005829C:cytosol GO:0005912C:adherens junction GO:0005923C:bicellular tight junction GO:0016323C:basolateral plasma membrane GO:0031594C:neuromuscular junction GO:0032281C:AMPA glutamate receptor complex GO:0043005C:neuron projection GO:0098839C:postsynaptic density membrane GO:0098978C:glutamatergic synapse |
- |
| 21431 |
SRR953582_primary_scf7180002010976_314-1042
Len: 728 bp
E-val: 9.9E-119
|
XP_016341480.1PREDICTED: protocadherin-10-like
|
GO:0007156P:homophilic cell-cell adhesion GO:0009653P:anatomical structure morphogenesis GO:0005509F:calcium ion binding GO:0005886C:plasma membrane |
- |
| 21432 |
SRR953582_primary_scf7180002010981_1-3663
Len: 3,662 bp
E-val: 2.3E-86
|
RXN24968.1zinc finger protein 711 isoform X1
|
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:1903706P:regulation of hemopoiesis GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0060388C:vitelline envelope |
- |
| 21433 |
SRR953582_primary_scf7180002011013_1-2456
Len: 2,455 bp
E-val: 4.0E-23
|
KTG33270.1hypothetical protein cypCar_00001555, partial
|
GO:0005886C:plasma membrane |
- |
| 21434 |
SRR953582_primary_scf7180002011027_1-2855
Len: 2,854 bp
E-val: 5.7E-77
|
KTF88759.1hypothetical protein cypCar_00048971
|
GO:0006814P:sodium ion transport GO:0019228P:neuronal action potential GO:0034220P:monoatomic ion transmembrane transport GO:0035725P:sodium ion transmembrane transport GO:0055085P:transmembrane transport GO:0086010P:membrane depolarization during action potential GO:0005248F:voltage-gated sodium channel activity GO:0005272F:sodium channel activity GO:0001518C:voltage-gated sodium channel complex GO:0005886C:plasma membrane GO:0030424C:axon GO:0034702C:monoatomic ion channel complex |
- |
| 21435 |
SRR953582_primary_scf7180002011028_1-3513
Len: 3,512 bp
E-val: 1.2E-36
|
XP_016426798.1PREDICTED: serine/threonine-protein kinase 40-like
Transferring phosphorus-containing groups
|
GO:0006338P:chromatin remodeling GO:0043408P:regulation of MAPK cascade GO:0004676F:3-phosphoinositide-dependent protein kinase activity GO:0004677F:DNA-dependent protein kinase activity GO:0004679F:AMP-activated protein kinase activity GO:0004694F:eukaryotic translation initiation factor 2alpha kinase activity GO:0004711F:ribosomal protein S6 kinase activity GO:0005524F:ATP binding GO:0035175F:histone H3S10 kinase activity GO:0035402F:histone H3T11 kinase activity GO:0035403F:histone H3T6 kinase activity GO:0035979F:histone H2AXS139 kinase activity GO:0044022F:histone H3S28 kinase activity GO:0044023F:histone H4S1 kinase activity GO:0044024F:histone H2AS1 kinase activity GO:0044025F:histone H2BS14 kinase activity GO:0072354F:histone H3T3 kinase activity GO:0072518F:Rho-dependent protein serine/threonine kinase activity GO:0140823F:histone H2BS36 kinase activity GO:0140855F:histone H3S57 kinase activity GO:0140857F:histone H3T45 kinase activity GO:1990244F:histone H2AT120 kinase activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
EC:EC:2.7.11 |
| 21436 |
SRR953582_primary_scf7180002011042_1-3014
Len: 3,013 bp
E-val: 1.4E-46
|
CAF89672.1unnamed protein product, partial
|
GO:0016079P:synaptic vesicle exocytosis GO:0065003P:protein-containing complex assembly GO:0140029P:exocytic process GO:1990504P:dense core granule exocytosis GO:0005515F:protein binding GO:0008289F:lipid binding GO:0046872F:metal ion binding GO:0005737C:cytoplasm GO:0005886C:plasma membrane GO:0098793C:presynapse |
- |
| 21437 |
SRR953582_primary_scf7180002011059_1-2054
Len: 2,053 bp
E-val: 9.7E-71
|
XP_026090140.1neuroendocrine convertase 1-like
|
GO:0110165C:cellular anatomical structure |
- |
| 21438 |
SRR953582_primary_scf7180002011111_1-2842
Len: 2,841 bp
E-val: 1.3E-254
|
KTF89326.1hypothetical protein cypCar_00009506
|
GO:0006996P:organelle organization GO:0008104P:intracellular protein localization GO:0016192P:vesicle-mediated transport GO:0046907P:intracellular transport |
- |
| 21439 |
SRR953582_primary_scf7180002011117_1-1644
Len: 1,643 bp
E-val: 3.6E-84
|
KTF92505.1hypothetical protein cypCar_00039140
|
GO:0008150P:biological_process GO:0003674F:molecular_function |
- |
| 21440 |
SRR953582_primary_scf7180002011129_1-2248
Len: 2,247 bp
E-val: 4.0E-17
|
XP_026106226.1mediator of RNA polymerase II transcription subunit 12-like isoform X3
|
GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0003713F:transcription coactivator activity GO:0008013F:beta-catenin binding GO:0016592C:mediator complex |
- |
| 21441 |
SRR953582_primary_scf7180002011142_1-3664
Len: 3,663 bp
E-val: 1.6E-39
|
XP_018964885.1PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UBR3-like
|
GO:0016567P:protein ubiquitination GO:0048592P:eye morphogenesis GO:0071596P:ubiquitin-dependent protein catabolic process via the N-end rule pathway GO:0008270F:zinc ion binding GO:0016740F:transferase activity GO:0016874F:ligase activity GO:0061630F:ubiquitin protein ligase activity GO:0000151C:ubiquitin ligase complex GO:0005737C:cytoplasm |
- |
| 21442 |
SRR953582_primary_scf7180002011173_381-1848
Len: 1,467 bp
E-val: 1.4E-23
|
KTF91188.1hypothetical protein cypCar_00007197
Acyltransferases
|
GO:0006511P:ubiquitin-dependent protein catabolic process GO:0016567P:protein ubiquitination GO:0008270F:zinc ion binding GO:0061630F:ubiquitin protein ligase activity GO:0005634C:nucleus GO:0005737C:cytoplasm |
EC:EC:2.3.2 |
| 21443 |
SRR953582_primary_scf7180002011183_1-3646
Len: 3,645 bp
E-val: 8.7E-264
|
KTG35838.1hypothetical protein cypCar_00037013
|
GO:0031581P:hemidesmosome assembly GO:0042060P:wound healing GO:0045104P:intermediate filament cytoskeleton organization GO:0003779F:actin binding GO:0005198F:structural molecule activity GO:0008017F:microtubule binding GO:0005737C:cytoplasm GO:0005874C:microtubule GO:0005882C:intermediate filament GO:0005925C:focal adhesion GO:0016020C:membrane GO:0030056C:hemidesmosome GO:0042995C:cell projection |
- |
| 21444 |
SRR953582_primary_scf7180002011198_1-950
Len: 949 bp
E-val: 2.7E-31
|
KTG39012.1hypothetical protein cypCar_00027378
RNA-directed DNA polymerase
|
GO:0007004P:telomere maintenance via telomerase GO:0007283P:spermatogenesis GO:0043249P:erythrocyte maturation GO:0060729P:intestinal epithelial structure maintenance GO:2000773P:negative regulation of cellular senescence GO:0003720F:telomerase activity GO:0042162F:telomeric DNA binding GO:0046872F:metal ion binding GO:0070034F:telomerase RNA binding GO:0000333C:telomerase catalytic core complex GO:0000781C:chromosome, telomeric region |
EC:EC:2.7.7.49 |
| 21445 |
SRR953582_primary_scf7180002011251_3361-3954
Len: 593 bp
E-val: 1.2E-95
|
XP_018973780.1PREDICTED: tektin-4-like
|
GO:0060271P:cilium assembly GO:0060294P:cilium movement involved in cell motility GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0015630C:microtubule cytoskeleton GO:0036126C:sperm flagellum |
- |
| 21446 |
SRR953582_primary_scf7180002011333_1798-2173
Len: 375 bp
E-val: 1.7E-21
|
KTF72513.1hypothetical protein cypCar_00036883, partial
|
GO:0031146P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process GO:0019005C:SCF ubiquitin ligase complex |
- |
| 21447 |
SRR953582_primary_scf7180002011347_1166-2447
Len: 1,281 bp
E-val: 2.5E-48
|
KTG09633.1hypothetical protein cypCar_00002223
|
-
|
- |
| 21448 |
SRR953582_primary_scf7180002011361_1-4662
Len: 4,661 bp
E-val: 1.8E-27
|
RXN21672.1exocyst complex component 6B-like isoform X1
|
GO:0006886P:intracellular protein transport GO:0006893P:Golgi to plasma membrane transport GO:0090522P:vesicle tethering involved in exocytosis GO:0000145C:exocyst GO:0016020C:membrane |
- |
| 21449 |
SRR953582_primary_scf7180002011374_1583-3043
Len: 1,460 bp
E-val: 6.7E-58
|
XP_018979500.1PREDICTED: chromobox protein homolog 3-like isoform X1
|
- | |
| 21450 |
SRR953582_primary_scf7180002011377_699-1214
Len: 515 bp
E-val: 2.1E-91
|
KTG32459.1hypothetical protein cypCar_00009511
|
GO:0007601P:visual perception GO:0008277P:regulation of G protein-coupled receptor signaling pathway GO:0001750C:photoreceptor outer segment |
- |