Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 21926 |
SRR953582_primary_scf7180002018793_36-1506
Len: 1,470 bp
E-val: 3.1E-34
|
XP_018937449.1PREDICTED: LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily M member 5
|
GO:0019722P:calcium-mediated signaling GO:0070588P:calcium ion transmembrane transport GO:0005227F:calcium-activated cation channel activity GO:0099604F:ligand-gated calcium channel activity GO:0005886C:plasma membrane |
- |
| 21927 |
SRR953582_primary_scf7180002018799_1-3724
Len: 3,723 bp
E-val: 5.4E-19
|
XP_023272450.1receptor tyrosine-protein kinase erbB-4-like
receptor protein-tyrosine kinase
|
GO:0007173P:epidermal growth factor receptor signaling pathway GO:0008286P:insulin receptor signaling pathway GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0030182P:neuron differentiation GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0043066P:negative regulation of apoptotic process GO:0043410P:positive regulation of MAPK cascade GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0050679P:positive regulation of epithelial cell proliferation GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005154F:epidermal growth factor receptor binding GO:0005524F:ATP binding GO:0008288F:boss receptor activity GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0009925C:basal plasma membrane GO:0012505C:endomembrane system GO:0043235C:receptor complex |
EC:EC:2.7.10.1 |
| 21928 |
SRR953582_primary_scf7180002018805_1-1457
Len: 1,456 bp
E-val: 7.2E-44
|
XP_018949103.1PREDICTED: putative monooxygenase p33MONOX isoform X1
|
GO:0004497F:monooxygenase activity GO:0005737C:cytoplasm |
- |
| 21929 |
SRR953582_primary_scf7180002018823_1-1538
Len: 1,537 bp
E-val: 1.3E-32
|
KTF73444.1hypothetical protein cypCar_00046194, partial
|
GO:0006898P:receptor-mediated endocytosis GO:0005041F:low-density lipoprotein particle receptor activity GO:0005509F:calcium ion binding GO:0042562F:hormone binding GO:0016324C:apical plasma membrane GO:0043235C:receptor complex |
- |
| 21930 |
SRR953582_primary_scf7180002018837_1-2005
Len: 2,004 bp
E-val: 1.8E-21
|
XP_018952493.1PREDICTED: serologically defined colon cancer antigen 8 homolog
|
GO:0001764P:neuron migration GO:0007098P:centrosome cycle GO:0030010P:establishment of cell polarity GO:0035148P:tube formation GO:0005813C:centrosome GO:0005814C:centriole |
- |
| 21931 |
SRR953582_primary_scf7180002018849_1611-2033
Len: 422 bp
E-val: 8.7E-59
|
XP_016111849.1PREDICTED: low-density lipoprotein receptor-related protein 6-like
|
GO:0006897P:endocytosis GO:0007399P:nervous system development GO:0060070P:canonical Wnt signaling pathway GO:0017147F:Wnt-protein binding GO:0042813F:Wnt receptor activity GO:0005886C:plasma membrane |
- |
| 21932 |
SRR953582_primary_scf7180002018856_1-1988
Len: 1,987 bp
E-val: 6.2E-22
|
KTG31615.1hypothetical protein cypCar_00021179
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007399P:nervous system development GO:0009653P:anatomical structure morphogenesis GO:0043124P:negative regulation of canonical NF-kappaB signal transduction GO:0060429P:epithelium development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0051059F:NF-kappaB binding GO:0140311F:protein sequestering activity GO:0005829C:cytosol GO:0035525C:NF-kappaB p50/p65 complex |
- |
| 21933 |
SRR953582_primary_scf7180002018892_52-2268
Len: 2,216 bp
E-val: 1.6E-50
|
KTG34109.1hypothetical protein cypCar_00005308
|
GO:0045892P:negative regulation of DNA-templated transcription GO:0003714F:transcription corepressor activity GO:0005634C:nucleus |
- |
| 21934 |
SRR953582_primary_scf7180002018904_1-501
Len: 500 bp
E-val: 6.9E-31
|
XP_018943580.1PREDICTED: ankyrin repeat domain-containing protein 13D-like
|
- | |
| 21935 |
SRR953582_primary_scf7180002018934_391-1671
Len: 1,280 bp
E-val: 3.6E-47
|
XP_018943939.1PREDICTED: bifunctional polynucleotide phosphatase/kinase-like
Transferring phosphorus-containing groups
|
GO:0003725F:double-stranded RNA binding GO:0004694F:eukaryotic translation initiation factor 2alpha kinase activity GO:0005524F:ATP binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
EC:EC:2.7.11 |
| 21936 |
SRR953582_primary_scf7180002018935_1036-2393
Len: 1,357 bp
E-val: 2.4E-25
|
KTF78951.1hypothetical protein cypCar_00014906
|
GO:0007129P:homologous chromosome pairing at meiosis GO:0070197P:meiotic attachment of telomere to nuclear envelope GO:0005637C:nuclear inner membrane GO:0070187C:shelterin complex |
- |
| 21937 |
SRR953582_primary_scf7180002018952_1-2650
Len: 2,649 bp
E-val: 6.7E-56
|
XP_018920378.1PREDICTED: N-acetylglucosamine-6-phosphate deacetylase
Acting on carbon-nitrogen bonds, other than peptide bonds
|
GO:0006044P:N-acetylglucosamine metabolic process GO:0046348P:amino sugar catabolic process GO:0016810F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds |
EC:EC:3.5 |
| 21938 |
SRR953582_primary_scf7180002018976_324-1440
Len: 1,116 bp
E-val: 5.0E-29
|
XP_016427908.1PREDICTED: diphosphomevalonate decarboxylase
diphosphomevalonate decarboxylase
|
GO:0003334P:keratinocyte development GO:0006695P:cholesterol biosynthetic process GO:0019287P:isopentenyl diphosphate biosynthetic process, mevalonate pathway GO:0045765P:regulation of angiogenesis GO:0003677F:DNA binding GO:0004163F:diphosphomevalonate decarboxylase activity GO:0005524F:ATP binding GO:0005829C:cytosol GO:0016020C:membrane |
EC:EC:4.1.1.33 |
| 21939 |
SRR953582_primary_scf7180002018976_2248-2700
Len: 452 bp
E-val: 3.8E-4
|
XP_026093344.1proline-rich receptor-like protein kinase PERK2
|
GO:0016301F:kinase activity |
- |
| 21940 |
SRR953582_primary_scf7180002018995_600-2331
Len: 1,731 bp
E-val: 1.0E-52
|
XP_018962848.1PREDICTED: retinal guanylyl cyclase 2-like
Transferring phosphorus-containing groups; adenylate cyclase; guanylate cyclase; nucleoside-triphosphate phosphatase
|
GO:0006182P:cGMP biosynthetic process GO:0007168P:receptor guanylyl cyclase signaling pathway GO:0035556P:intracellular signal transduction GO:0001653F:peptide receptor activity GO:0003924F:GTPase activity GO:0004016F:adenylate cyclase activity GO:0004383F:guanylate cyclase activity GO:0004672F:protein kinase activity GO:0005524F:ATP binding GO:0005886C:plasma membrane |
EC:EC:2.7.1 EC:EC:4.6.1.1 EC:EC:4.6.1.2 EC:EC:3.6.1.15 |
| 21941 |
SRR953582_primary_scf7180002019019_1-1700
Len: 1,699 bp
E-val: 6.1E-10
|
KTF94478.1hypothetical protein cypCar_00026861
|
GO:0006355P:regulation of DNA-templated transcription GO:0009301P:snRNA transcription GO:0000987F:cis-regulatory region sequence-specific DNA binding |
- |
| 21942 |
SRR953582_primary_scf7180002019043_1-1987
Len: 1,986 bp
E-val: 5.2E-21
|
XP_016098063.1PREDICTED: LOW QUALITY PROTEIN: EGF domain-specific O-linked N-acetylglucosamine transferase-like
protein O-GlcNAc transferase
|
GO:0097363F:protein O-acetylglucosaminyltransferase activity GO:0005788C:endoplasmic reticulum lumen |
EC:EC:2.4.1.255 |
| 21943 |
SRR953582_primary_scf7180002019046_1-571
Len: 570 bp
E-val: 5.8E-66
|
XP_018941286.1PREDICTED: ubiquitin domain-containing protein 1
|
GO:0005575C:cellular_component |
- |
| 21944 |
SRR953582_primary_scf7180002019105_259-1322
Len: 1,063 bp
E-val: 4.3E-70
|
XP_018962606.1PREDICTED: homeobox protein Hox-C6 isoform X1
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0009952P:anterior/posterior pattern specification GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
- |
| 21945 |
SRR953582_primary_scf7180002019107_538-2036
Len: 1,498 bp
E-val: 1.7E-72
|
KTF87953.1hypothetical protein cypCar_00004592
|
GO:0032039C:integrator complex |
- |
| 21946 |
SRR953582_primary_scf7180002019111_1-1824
Len: 1,823 bp
E-val: 3.4E-27
|
KTG06753.1hypothetical protein cypCar_00014234
|
GO:0016020C:membrane |
- |
| 21947 |
SRR953582_primary_scf7180002019118_1-960
Len: 959 bp
E-val: 1.0E-171
|
KTG41774.1hypothetical protein cypCar_00018788
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003677F:DNA binding GO:0008270F:zinc ion binding GO:0005634C:nucleus |
- |
| 21948 |
SRR953582_primary_scf7180002019166_1-857
Len: 856 bp
E-val: 6.1E-43
|
XP_018957995.1PREDICTED: LOW QUALITY PROTEIN: protein BANP
|
GO:0006325P:chromatin organization GO:0010564P:regulation of cell cycle process GO:0034504P:protein localization to nucleus GO:0042177P:negative regulation of protein catabolic process GO:0003677F:DNA binding GO:0005634C:nucleus |
- |
| 21949 |
SRR953582_primary_scf7180002019217_1-1801
Len: 1,800 bp
E-val: 1.1E-46
|
XP_016417417.1PREDICTED: protein jagged-1a
|
GO:0007219P:Notch signaling pathway GO:0048513P:animal organ development GO:0048731P:system development GO:0005112F:Notch binding GO:0005509F:calcium ion binding GO:0030414F:peptidase inhibitor activity GO:0005576C:extracellular region GO:0016020C:membrane |
- |
| 21950 |
SRR953582_primary_scf7180002019261_503-2103
Len: 1,600 bp
E-val: 1.1E-127
|
XP_018925254.1PREDICTED: eomesodermin-like
|
GO:0001707P:mesoderm formation GO:0001714P:endodermal cell fate specification GO:0002302P:CD8-positive, alpha-beta T cell differentiation involved in immune response GO:0006357P:regulation of transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0060429P:epithelium development GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000785C:chromatin GO:0005634C:nucleus |
- |