Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 22376 |
SRR953582_primary_scf7180002028494_216-692
Len: 476 bp
E-val: 6.3E-58
|
KTF95031.1hypothetical protein cypCar_00019289
|
GO:0001818P:negative regulation of cytokine production GO:0031397P:negative regulation of protein ubiquitination GO:0032435P:negative regulation of proteasomal ubiquitin-dependent protein catabolic process GO:0045071P:negative regulation of viral genome replication GO:0045088P:regulation of innate immune response GO:0003729F:mRNA binding GO:0004540F:RNA nuclease activity GO:0043130F:ubiquitin binding GO:0005730C:nucleolus GO:0005829C:cytosol GO:0016605C:PML body |
- |
| 22377 |
SRR953582_primary_scf7180002028535_742-1749
Len: 1,007 bp
E-val: 7.9E-58
|
KTF92137.1hypothetical protein cypCar_00012917, partial
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007420P:brain development GO:0021514P:ventral spinal cord interneuron differentiation GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0046983F:protein dimerization activity |
- |
| 22378 |
SRR953582_primary_scf7180002028537_1-1364
Len: 1,363 bp
E-val: 1.2E-27
|
KTG35561.1hypothetical protein cypCar_00019638
|
- | |
| 22379 |
SRR953582_primary_scf7180002028555_1-1438
Len: 1,437 bp
E-val: 1.1E-17
|
KTF80495.1hypothetical protein cypCar_00009310
|
GO:0070507P:regulation of microtubule cytoskeleton organization GO:0012505C:endomembrane system GO:0016020C:membrane GO:0045180C:basal cortex |
- |
| 22380 |
SRR953582_primary_scf7180002028579_1-597
Len: 596 bp
E-val: 1.6E-26
|
XP_016134096.1PREDICTED: echinoderm microtubule-associated protein-like 4
|
GO:0000226P:microtubule cytoskeleton organization GO:0008017F:microtubule binding GO:0005874C:microtubule GO:0016020C:membrane GO:0072686C:mitotic spindle |
- |
| 22381 |
SRR953582_primary_scf7180002028603_569-1399
Len: 830 bp
E-val: 2.3E-127
|
XP_016404380.1PREDICTED: zinc finger protein basonuclin-2-like
|
GO:0006355P:regulation of DNA-templated transcription GO:0039020P:pronephric nephron tubule development GO:0048066P:developmental pigmentation GO:0008270F:zinc ion binding GO:0005634C:nucleus |
- |
| 22382 |
SRR953582_primary_scf7180002028634_1-1427
Len: 1,426 bp
E-val: 1.3E-53
|
KTF88779.1hypothetical protein cypCar_00041269, partial
|
GO:0006508P:proteolysis GO:0016579P:protein deubiquitination GO:0021551P:central nervous system morphogenesis GO:0031647P:regulation of protein stability GO:1904888P:cranial skeletal system development GO:0004843F:cysteine-type deubiquitinase activity GO:0008234F:cysteine-type peptidase activity GO:0016787F:hydrolase activity GO:0005634C:nucleus GO:0005829C:cytosol |
- |
| 22383 |
SRR953582_primary_scf7180002028662_201-1925
Len: 1,724 bp
E-val: 1.2E-114
|
KTG39376.1hypothetical protein cypCar_00000861
|
GO:0009987P:cellular process GO:0005737C:cytoplasm GO:0043231C:intracellular membrane-bounded organelle |
- |
| 22384 |
SRR953582_primary_scf7180002028679_1-1022
Len: 1,021 bp
E-val: 4.7E-42
|
XP_018941142.1PREDICTED: nuclear receptor subfamily 4 group A member 1-like
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0006954P:inflammatory response GO:0010906P:regulation of glucose metabolic process GO:0030522P:intracellular receptor signaling pathway GO:0071376P:cellular response to corticotropin-releasing hormone stimulus GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0004879F:nuclear receptor activity GO:0008270F:zinc ion binding GO:0035259F:nuclear glucocorticoid receptor binding GO:0005634C:nucleus GO:0005667C:transcription regulator complex GO:0005829C:cytosol |
- |
| 22385 |
SRR953582_primary_scf7180002028686_675-1580
Len: 905 bp
E-val: 9.6E-31
|
XP_018930167.1PREDICTED: spermatogenesis-associated protein 4-like
|
GO:0016567P:protein ubiquitination GO:0031175P:neuron projection development GO:0045732P:positive regulation of protein catabolic process GO:0051493P:regulation of cytoskeleton organization GO:0008017F:microtubule binding GO:0005886C:plasma membrane GO:0005930C:axoneme GO:0030175C:filopodium GO:0043025C:neuronal cell body GO:0044295C:axonal growth cone |
- |
| 22386 |
SRR953582_primary_scf7180002028809_1-1977
Len: 1,976 bp
E-val: 3.5E-17
|
KTF85711.1hypothetical protein cypCar_00011964
|
GO:0034220P:monoatomic ion transmembrane transport GO:0045162P:clustering of voltage-gated sodium channels GO:0060271P:cilium assembly GO:0005814C:centriole |
- |
| 22387 |
SRR953582_primary_scf7180002028813_1-2002
Len: 2,001 bp
E-val: 1.5E-63
|
XP_018934308.1PREDICTED: tyrosine-protein phosphatase non-receptor type 2-like
Acting on ester bonds
|
GO:0004721F:phosphoprotein phosphatase activity GO:0110165C:cellular anatomical structure |
EC:EC:3.1.3 |
| 22388 |
SRR953582_primary_scf7180002028815_1-2706
Len: 2,705 bp
E-val: 2.3E-152
|
XP_018923958.1PREDICTED: uncharacterized protein LOC109050856
|
GO:0005737C:cytoplasm |
- |
| 22389 |
SRR953582_primary_scf7180002028834_1-1587
Len: 1,586 bp
E-val: 1.2E-23
|
XP_018966771.1PREDICTED: metalloprotease TIKI1-like
Acting on peptide bonds (peptidases)
|
GO:0006508P:proteolysis GO:0030178P:negative regulation of Wnt signaling pathway GO:0004222F:metalloendopeptidase activity GO:0046872F:metal ion binding GO:0005886C:plasma membrane |
EC:EC:3.4.24 |
| 22390 |
SRR953582_primary_scf7180002028853_1-1696
Len: 1,695 bp
E-val: 7.6E-37
|
XP_016336661.1PREDICTED: cadherin-2-like
|
GO:0000902P:cell morphogenesis GO:0002009P:morphogenesis of an epithelium GO:0007043P:cell-cell junction assembly GO:0007156P:homophilic cell-cell adhesion GO:0007416P:synapse assembly GO:0016339P:calcium-dependent cell-cell adhesion GO:0016477P:cell migration GO:0034332P:adherens junction organization GO:0044331P:cell-cell adhesion mediated by cadherin GO:0005509F:calcium ion binding GO:0008013F:beta-catenin binding GO:0045296F:cadherin binding GO:0005737C:cytoplasm GO:0005912C:adherens junction GO:0009986C:cell surface GO:0014069C:postsynaptic density GO:0014704C:intercalated disc GO:0016342C:catenin complex GO:0030027C:lamellipodium GO:0030057C:desmosome GO:0042383C:sarcolemma GO:0043005C:neuron projection GO:0045177C:apical part of cell GO:0048787C:presynaptic active zone membrane GO:0099634C:postsynaptic specialization membrane |
- |
| 22391 |
SRR953582_primary_scf7180002028863_1-2285
Len: 2,284 bp
E-val: 8.1E-26
|
XP_017320872.1PREDICTED: uncharacterized protein LOC108264080, partial
polypeptide N-acetylgalactosaminyltransferase
|
GO:0006493P:protein O-linked glycosylation GO:0004653F:polypeptide N-acetylgalactosaminyltransferase activity GO:0030246F:carbohydrate binding GO:0000139C:Golgi membrane |
EC:EC:2.4.1.41 |
| 22392 |
SRR953582_primary_scf7180002028880_856-1854
Len: 998 bp
E-val: 1.2E-34
|
XP_026083452.1protein-methionine sulfoxide oxidase mical3b-like isoform X2
F-actin monooxygenase
|
GO:0006887P:exocytosis GO:0003779F:actin binding GO:0046872F:metal ion binding GO:0071949F:FAD binding GO:0120501F:F-actin monooxygenase activity GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005856C:cytoskeleton |
EC:EC:1.14.13.225 |
| 22393 |
SRR953582_primary_scf7180002028886_1-1907
Len: 1,906 bp
E-val: 9.1E-23
|
XP_016096055.1PREDICTED: tripartite motif-containing protein 3-like isoform X1
Acyltransferases
|
GO:0000209P:protein polyubiquitination GO:0007399P:nervous system development GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0043523P:regulation of neuron apoptotic process GO:1990830P:cellular response to leukemia inhibitory factor GO:0008270F:zinc ion binding GO:0017022F:myosin binding GO:0061630F:ubiquitin protein ligase activity GO:0005737C:cytoplasm GO:0016020C:membrane |
EC:EC:2.3.2 |
| 22394 |
SRR953582_primary_scf7180002028893_33-1537
Len: 1,504 bp
E-val: 2.8E-27
|
XP_016115499.1PREDICTED: gamma-aminobutyric acid receptor subunit rho-1-like
|
GO:0006821P:chloride transport GO:0034220P:monoatomic ion transmembrane transport GO:1902476P:chloride transmembrane transport GO:0004888F:transmembrane signaling receptor activity GO:0005230F:extracellular ligand-gated monoatomic ion channel activity GO:0005254F:chloride channel activity GO:0005886C:plasma membrane GO:0016020C:membrane GO:0034707C:chloride channel complex |
- |
| 22395 |
SRR953582_primary_scf7180002028901_520-1948
Len: 1,428 bp
E-val: 8.0E-48
|
KTG44549.1hypothetical protein cypCar_00006715
|
GO:0003007P:heart morphogenesis GO:0048729P:tissue morphogenesis GO:0050789P:regulation of biological process |
- |
| 22396 |
SRR953582_primary_scf7180002028920_1-752
Len: 751 bp
E-val: 1.9E-8
|
XP_006637549.1PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform X2
Ligases; Acyltransferases
|
GO:0006511P:ubiquitin-dependent protein catabolic process GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0061630F:ubiquitin protein ligase activity GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0012505C:endomembrane system GO:0016020C:membrane |
EC:EC:6 EC:EC:2.3.2 |
| 22397 |
SRR953582_primary_scf7180002028926_762-1562
Len: 800 bp
E-val: 4.5E-149
|
XP_018941142.1PREDICTED: nuclear receptor subfamily 4 group A member 1-like
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0006954P:inflammatory response GO:0010906P:regulation of glucose metabolic process GO:0030522P:intracellular receptor signaling pathway GO:0071376P:cellular response to corticotropin-releasing hormone stimulus GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0004879F:nuclear receptor activity GO:0008270F:zinc ion binding GO:0035259F:nuclear glucocorticoid receptor binding GO:0005634C:nucleus GO:0005667C:transcription regulator complex GO:0005829C:cytosol |
- |
| 22398 |
SRR953582_primary_scf7180002028955_346-1845
Len: 1,499 bp
E-val: 1.4E-39
|
XP_018956749.1PREDICTED: protein SET-like
|
- | |
| 22399 |
SRR953582_primary_scf7180002028973_1-2018
Len: 2,017 bp
E-val: 3.3E-31
|
XP_016095673.1PREDICTED: actin-related protein 2/3 complex subunit 3-like
|
GO:0030833P:regulation of actin filament polymerization GO:0034314P:Arp2/3 complex-mediated actin nucleation GO:0003779F:actin binding GO:0003924F:GTPase activity GO:0005525F:GTP binding GO:0016787F:hydrolase activity GO:0005737C:cytoplasm GO:0005856C:cytoskeleton GO:0005885C:Arp2/3 protein complex |
- |
| 22400 |
SRR953582_primary_scf7180002029027_1-1255
Len: 1,254 bp
E-val: 4.7E-60
|
XP_018957550.1PREDICTED: calcineurin-binding protein cabin-1
|
- |