Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 22401 |
SRR953582_primary_scf7180002029045_1-2126
Len: 2,125 bp
E-val: 2.9E-94
|
XP_018965437.1PREDICTED: supervillin-like
|
GO:0007010P:cytoskeleton organization GO:0008154P:actin polymerization or depolymerization GO:0051014P:actin filament severing GO:0051016P:barbed-end actin filament capping GO:0003779F:actin binding GO:0005546F:phosphatidylinositol-4,5-bisphosphate binding GO:0051015F:actin filament binding GO:0005737C:cytoplasm GO:0015629C:actin cytoskeleton |
- |
| 22402 |
SRR953582_primary_scf7180002029061_670-1665
Len: 995 bp
E-val: 1.3E-177
|
XP_018924555.1PREDICTED: thymic stromal cotransporter homolog isoform X1
|
GO:0055085P:transmembrane transport GO:0022857F:transmembrane transporter activity GO:0016020C:membrane |
- |
| 22403 |
SRR953582_primary_scf7180002029071_1-2470
Len: 2,469 bp
E-val: 3.0E-50
|
XP_021172948.1peptidyl-tRNA hydrolase ICT1, mitochondrial isoform X1
|
- | |
| 22404 |
SRR953582_primary_scf7180002029083_1-2136
Len: 2,135 bp
E-val: 4.1E-32
|
CDR00892.1unnamed protein product
|
GO:0006355P:regulation of DNA-templated transcription GO:0030522P:intracellular receptor signaling pathway GO:0032870P:cellular response to hormone stimulus GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003677F:DNA binding GO:0110165C:cellular anatomical structure |
- |
| 22405 |
SRR953582_primary_scf7180002029099_367-1338
Len: 971 bp
E-val: 2.7E-172
|
XP_018966048.1PREDICTED: double-stranded RNA-specific editase 1-like isoform X1
double-stranded RNA adenine deaminase
|
GO:0006382P:adenosine to inosine editing GO:0006396P:RNA processing GO:0003725F:double-stranded RNA binding GO:0003726F:double-stranded RNA adenosine deaminase activity GO:0008251F:tRNA-specific adenosine deaminase activity GO:0005730C:nucleolus GO:0005737C:cytoplasm |
EC:EC:3.5.4.37 |
| 22406 |
SRR953582_primary_scf7180002029116_1-1863
Len: 1,862 bp
E-val: 7.5E-38
|
KTG06912.1hypothetical protein cypCar_00003392, partial
|
GO:0001755P:neural crest cell migration GO:0007411P:axon guidance GO:0030335P:positive regulation of cell migration GO:0050919P:negative chemotaxis GO:0071526P:semaphorin-plexin signaling pathway GO:0030215F:semaphorin receptor binding GO:0038191F:neuropilin binding GO:0045499F:chemorepellent activity GO:0005886C:plasma membrane |
- |
| 22407 |
SRR953582_primary_scf7180002029117_1-2845
Len: 2,844 bp
E-val: 8.4E-89
|
RXN26901.1low-density lipo receptor-related 1-like protein
|
GO:0006898P:receptor-mediated endocytosis GO:0006909P:phagocytosis GO:0150093P:amyloid-beta clearance by transcytosis GO:0150094P:amyloid-beta clearance by cellular catabolic process GO:1901342P:regulation of vasculature development GO:0034185F:apolipoprotein binding GO:0038024F:cargo receptor activity GO:0005886C:plasma membrane |
- |
| 22408 |
SRR953582_primary_scf7180002029145_1-2093
Len: 2,092 bp
E-val: 6.4E-54
|
XP_022529087.1myosin-7-like
myosin ATPase
|
GO:0007512P:adult heart development GO:0030049P:muscle filament sliding GO:0045214P:sarcomere organization GO:0060048P:cardiac muscle contraction GO:0000146F:microfilament motor activity GO:0005524F:ATP binding GO:0051015F:actin filament binding GO:0005737C:cytoplasm GO:0016460C:myosin II complex GO:0032982C:myosin filament |
EC:EC:5.6.1.8 |
| 22409 |
SRR953582_primary_scf7180002029186_942-1932
Len: 990 bp
E-val: 1.7E-81
|
XP_018967196.1PREDICTED: galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1-like isoform X1
glucuronosyltransferase; galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase
|
GO:0005975P:carbohydrate metabolic process GO:0050650P:chondroitin sulfate proteoglycan biosynthetic process GO:0015018F:galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity GO:0046872F:metal ion binding GO:0000139C:Golgi membrane GO:0005576C:extracellular region |
EC:EC:2.4.1.17 EC:EC:2.4.1.135 |
| 22410 |
SRR953582_primary_scf7180002029214_1-867
Len: 866 bp
E-val: 1.9E-52
|
KTG35703.1hypothetical protein cypCar_00000090
|
GO:0016020C:membrane |
- |
| 22411 |
SRR953582_primary_scf7180002029224_1-2791
Len: 2,790 bp
E-val: 4.9E-25
|
XP_026081825.1TNF receptor-associated factor 4-like
|
GO:0002072P:optic cup morphogenesis involved in camera-type eye development GO:0003405P:optic vesicle elongation GO:0007166P:cell surface receptor signaling pathway GO:0042981P:regulation of apoptotic process GO:0043122P:regulation of canonical NF-kappaB signal transduction GO:0045198P:establishment of epithelial cell apical/basal polarity GO:0046330P:positive regulation of JNK cascade GO:0005164F:tumor necrosis factor receptor binding GO:0008270F:zinc ion binding GO:0031625F:ubiquitin protein ligase binding GO:0035591F:signaling adaptor activity GO:0005737C:cytoplasm |
- |
| 22412 |
SRR953582_primary_scf7180002029308_1-2681
Len: 2,680 bp
E-val: 4.9E-30
|
KTG06711.1hypothetical protein cypCar_00013253
|
GO:0001755P:neural crest cell migration GO:0001764P:neuron migration GO:0003007P:heart morphogenesis GO:0003232P:bulbus arteriosus development GO:0003342P:proepicardium development GO:0007411P:axon guidance GO:0030901P:midbrain development GO:0030902P:hindbrain development GO:0031016P:pancreas development GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048701P:embryonic cranial skeleton morphogenesis GO:0048741P:skeletal muscle fiber development GO:0055015P:ventricular cardiac muscle cell development GO:0060059P:embryonic retina morphogenesis in camera-type eye GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003677F:DNA binding GO:0005634C:nucleus |
- |
| 22413 |
SRR953582_primary_scf7180002029328_509-3298
Len: 2,789 bp
E-val: 1.9E-21
|
KTF92576.1hypothetical protein cypCar_00015683
|
GO:0042981P:regulation of apoptotic process GO:0045786P:negative regulation of cell cycle GO:0002039F:p53 binding GO:0005634C:nucleus |
- |
| 22414 |
SRR953582_primary_scf7180002029334_1-983
Len: 982 bp
E-val: 9.5E-16
|
XP_016355341.1PREDICTED: cytoplasmic dynein 2 light intermediate chain 1-like isoform X2
|
GO:0035721P:intraciliary retrograde transport GO:0035735P:intraciliary transport involved in cilium assembly GO:0045504F:dynein heavy chain binding GO:0005813C:centrosome GO:0005868C:cytoplasmic dynein complex GO:0005874C:microtubule GO:0005930C:axoneme GO:0036064C:ciliary basal body GO:0097730C:non-motile cilium |
- |
| 22415 |
SRR953582_primary_scf7180002029354_1-2710
Len: 2,709 bp
E-val: 1.8E-27
|
XP_026096740.1grainyhead-like protein 2 homolog
|
GO:0021555P:midbrain-hindbrain boundary morphogenesis GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048839P:inner ear development GO:0060561P:apoptotic process involved in morphogenesis GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001228F:DNA-binding transcription activator activity, RNA polymerase II-specific GO:0005634C:nucleus GO:0016020C:membrane |
- |
| 22416 |
SRR953582_primary_scf7180002029456_1015-1880
Len: 865 bp
E-val: 4.7E-144
|
KTG34706.1hypothetical protein cypCar_00017145, partial
|
GO:0001755P:neural crest cell migration GO:0007411P:axon guidance GO:0030335P:positive regulation of cell migration GO:0050919P:negative chemotaxis GO:0071526P:semaphorin-plexin signaling pathway GO:0030215F:semaphorin receptor binding GO:0045499F:chemorepellent activity GO:0005886C:plasma membrane |
- |
| 22417 |
SRR953582_primary_scf7180002029467_395-1547
Len: 1,152 bp
E-val: 1.4E-162
|
XP_016416047.1PREDICTED: kelch-like protein 13 isoform X1
Acyltransferases
|
GO:0016567P:protein ubiquitination GO:0032465P:regulation of cytokinesis GO:0004842F:ubiquitin-protein transferase activity GO:0097602F:cullin family protein binding GO:0031463C:Cul3-RING ubiquitin ligase complex |
EC:EC:2.3.2 |
| 22418 |
SRR953582_primary_scf7180002029472_1-769
Len: 768 bp
E-val: 2.9E-36
|
KTG05272.1hypothetical protein cypCar_00002666
|
GO:0034220P:monoatomic ion transmembrane transport GO:0035235P:ionotropic glutamate receptor signaling pathway GO:0035249P:synaptic transmission, glutamatergic GO:0060079P:excitatory postsynaptic potential GO:0060291P:long-term synaptic potentiation GO:0004972F:NMDA glutamate receptor activity GO:1904315F:transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential GO:0017146C:NMDA selective glutamate receptor complex GO:0098839C:postsynaptic density membrane |
- |
| 22419 |
SRR953582_primary_scf7180002029508_499-2375
Len: 1,876 bp
E-val: 8.1E-24
|
XP_018939973.1PREDICTED: uncharacterized protein LOC109067500
|
GO:0007165P:signal transduction GO:0007264P:small GTPase-mediated signal transduction GO:0038203P:TORC2 signaling GO:2001136P:negative regulation of endocytic recycling GO:0005096F:GTPase activator activity GO:0005737C:cytoplasm GO:0031932C:TORC2 complex |
- |
| 22420 |
SRR953582_primary_scf7180002029519_911-1348
Len: 437 bp
E-val: 2.7E-31
|
XP_026111790.1plexin-A1-like
|
GO:0002040P:sprouting angiogenesis GO:0007416P:synapse assembly GO:0030334P:regulation of cell migration GO:0042060P:wound healing GO:0071526P:semaphorin-plexin signaling pathway GO:0097485P:neuron projection guidance GO:0017154F:semaphorin receptor activity GO:0002116C:semaphorin receptor complex GO:0005886C:plasma membrane |
- |
| 22421 |
SRR953582_primary_scf7180002029580_490-2146
Len: 1,656 bp
E-val: 3.6E-31
|
XP_018981057.1PREDICTED: organic solute transporter subunit alpha
|
GO:0009987P:cellular process GO:0015721P:bile acid and bile salt transport GO:0071705P:nitrogen compound transport GO:0022857F:transmembrane transporter activity GO:0042803F:protein homodimerization activity GO:0046982F:protein heterodimerization activity GO:0005635C:nuclear envelope GO:0005789C:endoplasmic reticulum membrane GO:0005886C:plasma membrane GO:0032991C:protein-containing complex |
- |
| 22422 |
SRR953582_primary_scf7180002029583_1-1681
Len: 1,680 bp
E-val: 2.4E-51
|
XP_026099159.1PHD finger protein 14-like isoform X2
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0008270F:zinc ion binding |
- |
| 22423 |
SRR953582_primary_scf7180002029637_1-1338
Len: 1,337 bp
E-val: 2.0E-88
|
XP_018932644.1PREDICTED: alpha-2,8-sialyltransferase 8F-like
alpha-N-acetylneuraminate alpha-2,8-sialyltransferase
|
GO:0006491P:N-glycan processing GO:0009311P:oligosaccharide metabolic process GO:0003828F:alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity GO:0000139C:Golgi membrane |
EC:EC:2.4.3.8 |
| 22424 |
SRR953582_primary_scf7180002029648_1-1458
Len: 1,457 bp
E-val: 3.8E-29
|
RXN23908.1sortilin-related receptor isoform X1
|
GO:0006622P:protein targeting to lysosome GO:0006892P:post-Golgi vesicle-mediated transport GO:0006897P:endocytosis GO:0045053P:protein retention in Golgi apparatus GO:0005789C:endoplasmic reticulum membrane GO:0005794C:Golgi apparatus GO:0005886C:plasma membrane GO:0030658C:transport vesicle membrane GO:0031901C:early endosome membrane GO:0032585C:multivesicular body membrane GO:0055038C:recycling endosome membrane |
- |
| 22425 |
SRR953582_primary_scf7180002029651_1-2415
Len: 2,414 bp
E-val: 4.5E-27
|
XP_016312917.1PREDICTED: LOW QUALITY PROTEIN: ceramide kinase
ceramide kinase
|
EC:EC:2.7.1.138 |