Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 23201 |
SRR953582_primary_scf7180002055949_1-1263
Len: 1,262 bp
E-val: 3.4E-26
|
XP_018927574.1PREDICTED: protein CASC3-like
|
GO:0000184P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0000398P:mRNA splicing, via spliceosome GO:0006417P:regulation of translation GO:0051028P:mRNA transport GO:0003729F:mRNA binding GO:0010494C:cytoplasmic stress granule GO:0016607C:nuclear speck GO:0030425C:dendrite GO:0035145C:exon-exon junction complex GO:0048471C:perinuclear region of cytoplasm GO:0071006C:U2-type catalytic step 1 spliceosome |
- |
| 23202 |
SRR953582_primary_scf7180002055951_1-1483
Len: 1,482 bp
E-val: 2.9E-32
|
XP_026057208.1collagen alpha-1(XI) chain-like isoform X1
|
GO:0030198P:extracellular matrix organization GO:0030020F:extracellular matrix structural constituent conferring tensile strength GO:0005581C:collagen trimer GO:0005615C:extracellular space GO:0031012C:extracellular matrix |
- |
| 23203 |
SRR953582_primary_scf7180002055963_1-881
Len: 880 bp
E-val: 3.7E-43
|
XP_026068168.1general transcription factor II-I repeat domain-containing protein 1-like isoform X2
|
GO:0006355P:regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0003700F:DNA-binding transcription factor activity GO:0005634C:nucleus |
- |
| 23204 |
SRR953582_primary_scf7180002056016_9-1207
Len: 1,198 bp
E-val: 5.5E-42
|
XP_026067578.1neuferricin
|
GO:0012505C:endomembrane system GO:0016020C:membrane |
- |
| 23205 |
SRR953582_primary_scf7180002056059_268-1339
Len: 1,071 bp
E-val: 3.1E-28
|
KTF85071.1hypothetical protein cypCar_00021701
Transferring phosphorus-containing groups
|
GO:0009987P:cellular process GO:0061300P:cerebellum vasculature development GO:0004674F:protein serine/threonine kinase activity GO:0005488F:binding |
EC:EC:2.7.11 |
| 23206 |
SRR953582_primary_scf7180002056222_82-1050
Len: 968 bp
E-val: 5.5E-24
|
KTF73110.1hypothetical protein cypCar_00036596, partial
|
GO:0042274P:ribosomal small subunit biogenesis GO:0045943P:positive regulation of transcription by RNA polymerase I GO:2000234P:positive regulation of rRNA processing GO:0003723F:RNA binding GO:0032040C:small-subunit processome |
- |
| 23207 |
SRR953582_primary_scf7180002056225_1-577
Len: 576 bp
E-val: 3.6E-55
|
XP_018958534.1PREDICTED: calmodulin-binding transcription activator 1-like isoform X1
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0007399P:nervous system development GO:0003690F:double-stranded DNA binding GO:0003712F:transcription coregulator activity GO:0005634C:nucleus |
- |
| 23208 |
SRR953582_primary_scf7180002056246_1-1157
Len: 1,156 bp
E-val: 7.2E-23
|
XP_016371227.1PREDICTED: solute carrier family 35 member B1-like
|
GO:0015786P:UDP-glucose transmembrane transport GO:0072334P:UDP-galactose transmembrane transport GO:0005459F:UDP-galactose transmembrane transporter activity GO:0005460F:UDP-glucose transmembrane transporter activity GO:0000139C:Golgi membrane GO:0005789C:endoplasmic reticulum membrane |
- |
| 23209 |
SRR953582_primary_scf7180002056403_520-1533
Len: 1,013 bp
E-val: 9.3E-67
|
KTF88222.1hypothetical protein cypCar_00012580
|
- | |
| 23210 |
SRR953582_primary_scf7180002056406_1-1505
Len: 1,504 bp
E-val: 8.5E-24
|
XP_016151263.1PREDICTED: major facilitator superfamily domain-containing protein 2B-like
|
GO:0006869P:lipid transport GO:0008643P:carbohydrate transport GO:0055085P:transmembrane transport GO:0015293F:symporter activity GO:0046624F:sphingolipid transporter activity GO:0005886C:plasma membrane GO:0016020C:membrane |
- |
| 23211 |
SRR953582_primary_scf7180002056491_1-1934
Len: 1,933 bp
E-val: 7.6E-41
|
XP_026072597.1LOW QUALITY PROTEIN: integrin alpha-11-like
|
GO:0007155P:cell adhesion GO:0110165C:cellular anatomical structure |
- |
| 23212 |
SRR953582_primary_scf7180002056511_9-1293
Len: 1,284 bp
E-val: 7.5E-45
|
KTG31264.1hypothetical protein cypCar_00029468
|
GO:0005622C:intracellular anatomical structure |
- |
| 23213 |
SRR953582_primary_scf7180002056527_1-1027
Len: 1,026 bp
E-val: 1.4E-14
|
KTF77023.1hypothetical protein cypCar_00017969
|
GO:0016197P:endosomal transport GO:0005085F:guanyl-nucleotide exchange factor activity GO:0031267F:small GTPase binding GO:0005737C:cytoplasm GO:0005813C:centrosome GO:0030425C:dendrite GO:0043231C:intracellular membrane-bounded organelle |
- |
| 23214 |
SRR953582_primary_scf7180002056601_1-715
Len: 714 bp
E-val: 1.9E-37
|
KTG34642.1hypothetical protein cypCar_00012402
|
GO:0001525P:angiogenesis GO:0006355P:regulation of DNA-templated transcription GO:0007219P:Notch signaling pathway GO:0007411P:axon guidance GO:0050793P:regulation of developmental process GO:0005509F:calcium ion binding GO:0038023F:signaling receptor activity GO:0005634C:nucleus GO:0005886C:plasma membrane GO:0009986C:cell surface GO:0012505C:endomembrane system GO:0043235C:receptor complex |
- |
| 23215 |
SRR953582_primary_scf7180002056635_1-1160
Len: 1,159 bp
E-val: 1.0E-40
|
KTG01579.1hypothetical protein cypCar_00011171, partial
|
GO:0010824P:regulation of centrosome duplication GO:0035735P:intraciliary transport involved in cilium assembly GO:0005929C:cilium GO:0034451C:centriolar satellite |
- |
| 23216 |
SRR953582_primary_scf7180002056640_1-776
Len: 775 bp
E-val: 2.8E-31
|
KTG43967.1hypothetical protein cypCar_00041222
Acting on peptide bonds (peptidases)
|
GO:0004181F:metallocarboxypeptidase activity GO:0005886C:plasma membrane |
EC:EC:3.4.17 |
| 23217 |
SRR953582_primary_scf7180002056649_1-1526
Len: 1,525 bp
E-val: 2.8E-30
|
BAF63404.1cone transducin alpha subunit
|
GO:0050896P:response to stimulus |
- |
| 23218 |
SRR953582_primary_scf7180002056683_668-1031
Len: 363 bp
E-val: 6.2E-29
|
XP_018980157.1PREDICTED: sodium bicarbonate transporter-like protein 11 isoform X1
|
GO:0006820P:monoatomic anion transport GO:0015698P:inorganic anion transport GO:0050801P:monoatomic ion homeostasis GO:0055085P:transmembrane transport GO:0005452F:solute:inorganic anion antiporter activity GO:0016323C:basolateral plasma membrane |
- |
| 23219 |
SRR953582_primary_scf7180002056697_1-1089
Len: 1,088 bp
E-val: 1.2E-24
|
XP_016118949.1PREDICTED: phenylalanine--tRNA ligase beta subunit-like, partial
phenylalanine--tRNA ligase
|
GO:0006432P:phenylalanyl-tRNA aminoacylation GO:0000287F:magnesium ion binding GO:0003723F:RNA binding GO:0004826F:phenylalanine-tRNA ligase activity GO:0005524F:ATP binding GO:0009328C:phenylalanine-tRNA ligase complex |
EC:EC:6.1.1.20 |
| 23220 |
SRR953582_primary_scf7180002056704_425-1128
Len: 703 bp
E-val: 2.0E-28
|
CAB60197.1inducible nitric oxide synthase
|
GO:0036094F:small molecule binding |
- |
| 23221 |
SRR953582_primary_scf7180002056787_1-1357
Len: 1,356 bp
E-val: 5.9E-40
|
KTG33055.1hypothetical protein cypCar_00036746, partial
|
GO:0009987P:cellular process |
- |
| 23222 |
SRR953582_primary_scf7180002056831_344-1286
Len: 942 bp
E-val: 2.3E-67
|
KTF94601.1hypothetical protein cypCar_00017074
Transferases
|
GO:0006783P:heme biosynthetic process GO:0016226P:iron-sulfur cluster assembly GO:0016740F:transferase activity GO:0005759C:mitochondrial matrix |
EC:EC:2 |
| 23223 |
SRR953582_primary_scf7180002056848_1-1268
Len: 1,267 bp
E-val: 6.3E-20
|
KTG34862.1hypothetical protein cypCar_00022674
|
- | |
| 23224 |
SRR953582_primary_scf7180002056860_229-1218
Len: 989 bp
E-val: 2.2E-182
|
KTG41636.1hypothetical protein cypCar_00000728
|
GO:0001841P:neural tube formation GO:0007098P:centrosome cycle GO:0007163P:establishment or maintenance of cell polarity GO:0021510P:spinal cord development GO:0035050P:embryonic heart tube development GO:0035844P:cloaca development GO:0045176P:apical protein localization GO:0048696P:regulation of collateral sprouting in absence of injury GO:0048793P:pronephros development GO:0051301P:cell division GO:0060341P:regulation of cellular localization GO:0005634C:nucleus GO:0005923C:bicellular tight junction GO:0005938C:cell cortex GO:0016324C:apical plasma membrane GO:0032154C:cleavage furrow |
- |
| 23225 |
SRR953582_primary_scf7180002056959_642-1432
Len: 790 bp
E-val: 2.9E-47
|
XP_018973209.1PREDICTED: LOW QUALITY PROTEIN: ryanodine receptor 2-like
|
GO:0006941P:striated muscle contraction GO:0014808P:release of sequestered calcium ion into cytosol by sarcoplasmic reticulum GO:0019722P:calcium-mediated signaling GO:0005219F:ryanodine-sensitive calcium-release channel activity GO:0005509F:calcium ion binding GO:0005790C:smooth endoplasmic reticulum GO:0030018C:Z disc GO:0033017C:sarcoplasmic reticulum membrane GO:0034704C:calcium channel complex GO:0042383C:sarcolemma |
- |