Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 23376 |
SRR953582_primary_scf7180002064818_402-791
Len: 389 bp
E-val: 7.2E-60
|
KTF92631.1hypothetical protein cypCar_00044444
Hydrolases
|
GO:0006283P:transcription-coupled nucleotide-excision repair GO:0006338P:chromatin remodeling GO:0006357P:regulation of transcription by RNA polymerase II GO:0009411P:response to UV GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003677F:DNA binding GO:0005524F:ATP binding GO:0016787F:hydrolase activity GO:0140658F:ATP-dependent chromatin remodeler activity GO:0005634C:nucleus |
EC:EC:3 |
| 23377 |
SRR953582_primary_scf7180002064833_1-1225
Len: 1,224 bp
E-val: 7.9E-20
|
XP_018931416.1PREDICTED: aquaporin-4-like
|
GO:0006833P:water transport GO:0055085P:transmembrane transport GO:0015250F:water channel activity GO:0005886C:plasma membrane |
- |
| 23378 |
SRR953582_primary_scf7180002064834_1-1319
Len: 1,318 bp
E-val: 1.5E-48
|
XP_016395357.1PREDICTED: bestrophin-4-like
|
GO:0006821P:chloride transport GO:0034220P:monoatomic ion transmembrane transport GO:1902476P:chloride transmembrane transport GO:0005254F:chloride channel activity GO:0015267F:channel activity GO:0005886C:plasma membrane GO:0034707C:chloride channel complex |
- |
| 23379 |
SRR953582_primary_scf7180002064849_1-724
Len: 723 bp
E-val: 2.0E-18
|
XP_016419500.1PREDICTED: espin-like
|
GO:0007605P:sensory perception of sound GO:0051017P:actin filament bundle assembly GO:0051015F:actin filament binding GO:0005737C:cytoplasm GO:0032420C:stereocilium |
- |
| 23380 |
SRR953582_primary_scf7180002065020_1-745
Len: 744 bp
E-val: 1.8E-22
|
KTF77090.1hypothetical protein cypCar_00035021
procollagen-proline 4-dioxygenase
|
GO:0004656F:procollagen-proline 4-dioxygenase activity GO:0005506F:iron ion binding GO:0031418F:L-ascorbic acid binding GO:0005788C:endoplasmic reticulum lumen |
EC:EC:1.14.11.2 |
| 23381 |
SRR953582_primary_scf7180002065036_1-1320
Len: 1,319 bp
E-val: 9.8E-24
|
KTG42335.1hypothetical protein cypCar_00004286
|
GO:0007265P:Ras protein signal transduction GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005886C:plasma membrane |
- |
| 23382 |
SRR953582_primary_scf7180002065061_1-236
Len: 235 bp
E-val: 8.0E-38
|
XP_016097930.1PREDICTED: protein FAM89A
Acting on peptide bonds (peptidases)
|
GO:0006974P:DNA damage response GO:0003697F:single-stranded DNA binding GO:0004222F:metalloendopeptidase activity GO:0031593F:polyubiquitin modification-dependent protein binding GO:0005634C:nucleus |
EC:EC:3.4.24 |
| 23383 |
SRR953582_primary_scf7180002065077_1-1365
Len: 1,364 bp
E-val: 8.8E-44
|
KTF89501.1hypothetical protein cypCar_00027145
|
GO:0009987P:cellular process GO:0005737C:cytoplasm GO:0043231C:intracellular membrane-bounded organelle GO:0098588C:bounding membrane of organelle |
- |
| 23384 |
SRR953582_primary_scf7180002065111_481-1048
Len: 567 bp
E-val: 1.0E-33
|
NP_956632.1AP-4 complex subunit beta-1
|
GO:0006886P:intracellular protein transport GO:0016192P:vesicle-mediated transport GO:0030276F:clathrin binding GO:0012505C:endomembrane system GO:0030131C:clathrin adaptor complex |
- |
| 23385 |
SRR953582_primary_scf7180002065181_271-747
Len: 476 bp
E-val: 1.2E-72
|
KTF88856.1hypothetical protein cypCar_00028656
dopamine beta-monooxygenase
|
GO:0006589P:octopamine biosynthetic process GO:0042420P:dopamine catabolic process GO:0042421P:norepinephrine biosynthetic process GO:0004500F:dopamine beta-monooxygenase activity GO:0005507F:copper ion binding GO:0005615C:extracellular space GO:0030667C:secretory granule membrane |
EC:EC:1.14.17.1 |
| 23386 |
SRR953582_primary_scf7180002065306_401-1555
Len: 1,154 bp
E-val: 4.7E-107
|
KTF72102.1hypothetical protein cypCar_00042734
|
GO:0005739C:mitochondrion |
- |
| 23387 |
SRR953582_primary_scf7180002065372_1-789
Len: 788 bp
E-val: 4.8E-26
|
XP_016094170.1PREDICTED: lethal(3)malignant brain tumor-like protein 1
Transferring phosphorus-containing groups
|
GO:0006325P:chromatin organization GO:0045892P:negative regulation of DNA-templated transcription GO:0003682F:chromatin binding GO:0004674F:protein serine/threonine kinase activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0042393F:histone binding GO:0005634C:nucleus |
EC:EC:2.7.11 |
| 23388 |
SRR953582_primary_scf7180002065415_1-1174
Len: 1,173 bp
E-val: 2.3E-24
|
KTF95498.1hypothetical protein cypCar_00024654
|
GO:0000122P:negative regulation of transcription by RNA polymerase II GO:0060271P:cilium assembly GO:0061371P:determination of heart left/right asymmetry GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001227F:DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0005634C:nucleus |
- |
| 23389 |
SRR953582_primary_scf7180002065606_346-1040
Len: 694 bp
E-val: 2.5E-39
|
XP_018919377.1PREDICTED: D-dopachrome decarboxylase-A-like
|
GO:0008152P:metabolic process GO:0043066P:negative regulation of apoptotic process GO:0048839P:inner ear development GO:0003824F:catalytic activity GO:0110165C:cellular anatomical structure |
- |
| 23390 |
SRR953582_primary_scf7180002065623_1-1087
Len: 1,086 bp
E-val: 2.7E-19
|
KTF90462.1hypothetical protein cypCar_00039462
|
GO:0010508P:positive regulation of autophagy GO:0034198P:cellular response to amino acid starvation GO:1904262P:negative regulation of TORC1 signaling GO:0005764C:lysosome GO:1990130C:GATOR1 complex |
- |
| 23391 |
SRR953582_primary_scf7180002065729_1-1377
Len: 1,376 bp
E-val: 9.5E-14
|
XP_016353863.1PREDICTED: centrosomal protein of 120 kDa-like
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0010825P:positive regulation of centrosome duplication GO:0021987P:cerebral cortex development GO:0022008P:neurogenesis GO:0022027P:interkinetic nuclear migration GO:0030953P:astral microtubule organization GO:0045724P:positive regulation of cilium assembly GO:1903724P:positive regulation of centriole elongation GO:1904951P:positive regulation of establishment of protein localization GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0005813C:centrosome GO:0005814C:centriole |
- |
| 23392 |
SRR953582_primary_scf7180002065790_1-767
Len: 766 bp
E-val: 7.6E-29
|
KTG34510.1hypothetical protein cypCar_00008062
|
GO:0001889P:liver development GO:0007420P:brain development GO:0046323P:D-glucose import GO:0055056F:D-glucose transmembrane transporter activity GO:0110165C:cellular anatomical structure |
- |
| 23393 |
SRR953582_primary_scf7180002065919_1-1171
Len: 1,170 bp
E-val: 1.9E-39
|
XP_018969120.1PREDICTED: uncharacterized protein LOC109100079
|
- | |
| 23394 |
SRR953582_primary_scf7180002066008_1-1204
Len: 1,203 bp
E-val: 5.9E-52
|
KTF85192.1hypothetical protein cypCar_00020610
ribonuclease P
|
GO:0000447P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0001682P:tRNA 5'-leader removal GO:0000171F:ribonuclease MRP activity GO:0004526F:ribonuclease P activity GO:0000172C:ribonuclease MRP complex GO:0030681C:multimeric ribonuclease P complex |
EC:EC:3.1.26.5 |
| 23395 |
SRR953582_primary_scf7180002066056_1-730
Len: 729 bp
E-val: 7.7E-55
|
XP_018979142.1PREDICTED: NT-3 growth factor receptor-like
receptor protein-tyrosine kinase
|
GO:0007173P:epidermal growth factor receptor signaling pathway GO:0007417P:central nervous system development GO:0008286P:insulin receptor signaling pathway GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0010976P:positive regulation of neuron projection development GO:0031547P:brain-derived neurotrophic factor receptor signaling pathway GO:0035790P:platelet-derived growth factor receptor-alpha signaling pathway GO:0035791P:platelet-derived growth factor receptor-beta signaling pathway GO:0036323P:vascular endothelial growth factor receptor-1 signaling pathway GO:0038063P:collagen-activated tyrosine kinase receptor signaling pathway GO:0038084P:vascular endothelial growth factor signaling pathway GO:0038109P:Kit signaling pathway GO:0038145P:macrophage colony-stimulating factor signaling pathway GO:0038179P:neurotrophin signaling pathway GO:0043066P:negative regulation of apoptotic process GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0048012P:hepatocyte growth factor receptor signaling pathway GO:0048013P:ephrin receptor signaling pathway GO:0051897P:positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction GO:1990090P:cellular response to nerve growth factor stimulus GO:0005004F:GPI-linked ephrin receptor activity GO:0005005F:transmembrane-ephrin receptor activity GO:0005006F:epidermal growth factor receptor activity GO:0005007F:fibroblast growth factor receptor activity GO:0005008F:hepatocyte growth factor receptor activity GO:0005009F:insulin receptor activity GO:0005010F:insulin-like growth factor receptor activity GO:0005011F:macrophage colony-stimulating factor receptor activity GO:0005018F:platelet-derived growth factor alpha-receptor activity GO:0005019F:platelet-derived growth factor beta-receptor activity GO:0005020F:stem cell factor receptor activity GO:0005021F:vascular endothelial growth factor receptor activity GO:0005524F:ATP binding GO:0008288F:boss receptor activity GO:0036332F:placental growth factor receptor activity GO:0038062F:protein tyrosine kinase collagen receptor activity GO:0043121F:neurotrophin binding GO:0046872F:metal ion binding GO:0060175F:brain-derived neurotrophic factor receptor activity GO:0005886C:plasma membrane GO:0012505C:endomembrane system GO:0030424C:axon GO:0043235C:receptor complex |
EC:EC:2.7.10.1 |
| 23396 |
SRR953582_primary_scf7180002066153_416-1123
Len: 707 bp
E-val: 2.5E-79
|
KTG40993.1hypothetical protein cypCar_00006165
Acting on ester bonds
|
GO:0009987P:cellular process GO:0016791F:phosphatase activity |
EC:EC:3.1.3 |
| 23397 |
SRR953582_primary_scf7180002066157_1-1499
Len: 1,498 bp
E-val: 3.2E-47
|
XP_016428802.1PREDICTED: protein FAM172A-like isoform X1
|
GO:0006397P:mRNA processing GO:0008380P:RNA splicing GO:0031048P:regulatory ncRNA-mediated heterochromatin formation GO:0035197F:siRNA binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
- |
| 23398 |
SRR953582_primary_scf7180002066248_1-727
Len: 726 bp
E-val: 1.7E-57
|
XP_018961524.1PREDICTED: low-density lipoprotein receptor-related protein 4
|
GO:0006898P:receptor-mediated endocytosis GO:0005509F:calcium ion binding GO:0042562F:hormone binding GO:0016324C:apical plasma membrane GO:0043235C:receptor complex |
- |
| 23399 |
SRR953582_primary_scf7180002066255_1-939
Len: 938 bp
E-val: 6.1E-28
|
XP_026114247.1N-acetyltransferase ESCO1
Transferring phosphorus-containing groups; histone acetyltransferase
|
GO:0007064P:mitotic sister chromatid cohesion GO:0008270F:zinc ion binding GO:0016301F:kinase activity GO:0061733F:protein-lysine-acetyltransferase activity GO:0000785C:chromatin GO:0005634C:nucleus |
EC:EC:2.7 EC:EC:2.3.1.48 |
| 23400 |
SRR953582_primary_scf7180002066305_1-957
Len: 956 bp
E-val: 8.1E-12
|
KTF92663.1hypothetical protein cypCar_00018857
protein-tyrosine-phosphatase; [histone H3]-trimethyl-L-lysine(9) demethylase
|
GO:0006338P:chromatin remodeling GO:0007155P:cell adhesion GO:0010468P:regulation of gene expression GO:0004726F:non-membrane spanning protein tyrosine phosphatase activity GO:0008201F:heparin binding GO:0008270F:zinc ion binding GO:0030946F:protein tyrosine phosphatase activity, metal-dependent GO:0051864F:histone H3K36 demethylase activity GO:0140684F:histone H3K9me2/H3K9me3 demethylase activity GO:0140793F:histone H2AXY142 phosphatase activity GO:0000785C:chromatin GO:0005634C:nucleus GO:0016020C:membrane |
EC:EC:3.1.3.48 EC:EC:1.14.11.66 |