Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 2351 |
SRR924327_primary_scf7180002495169_238-543
Len: 305 bp
E-val: 7.7E-9
|
XP_026050800.1band 4.1-like protein 2 isoform X6
|
GO:0030866P:cortical actin cytoskeleton organization GO:0031032P:actomyosin structure organization GO:0003779F:actin binding GO:0005198F:structural molecule activity GO:0005856C:cytoskeleton GO:0005886C:plasma membrane |
- |
| 2352 |
SRR924327_primary_scf7180002496128_1-989
Len: 988 bp
E-val: 2.4E-22
|
XP_026121805.1hepatocyte growth factor-like protein
Acting on peptide bonds (peptidases)
|
GO:0006313P:DNA transposition GO:0006508P:proteolysis GO:0006954P:inflammatory response GO:0015074P:DNA integration GO:0030282P:bone mineralization GO:0046425P:regulation of receptor signaling pathway via JAK-STAT GO:0003677F:DNA binding GO:0004252F:serine-type endopeptidase activity GO:0030971F:receptor tyrosine kinase binding GO:0005615C:extracellular space |
EC:EC:3.4.21 |
| 2353 |
SRR924327_primary_scf7180002496138_1-390
Len: 389 bp
E-val: 3.4E-25
|
KTF77651.1hypothetical protein cypCar_00031221
|
GO:0045022P:early endosome to late endosome transport GO:0051898P:negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction GO:0141039F:phosphatidylinositol 3-kinase inhibitor activity GO:0005829C:cytosol GO:0031901C:early endosome membrane GO:0031902C:late endosome membrane |
- |
| 2354 |
SRR924327_primary_scf7180002496744_1-1076
Len: 1,075 bp
E-val: 2.4E-68
|
XP_026135333.1glutamate receptor 3-like isoform X2
|
GO:0034220P:monoatomic ion transmembrane transport GO:0015276F:ligand-gated monoatomic ion channel activity GO:0038023F:signaling receptor activity GO:0045211C:postsynaptic membrane |
- |
| 2355 |
SRR924327_primary_scf7180002496958_1-949
Len: 948 bp
E-val: 6.4E-17
|
KTF84262.1hypothetical protein cypCar_00015875, partial
propionyl-CoA carboxylase
|
GO:0001841P:neural tube formation GO:0006629P:lipid metabolic process GO:0008589P:regulation of smoothened signaling pathway GO:0009953P:dorsal/ventral pattern formation GO:0014032P:neural crest cell development GO:0021536P:diencephalon development GO:0021846P:cell proliferation in forebrain GO:0030902P:hindbrain development GO:0033278P:cell proliferation in midbrain GO:0042127P:regulation of cell population proliferation GO:0045892P:negative regulation of DNA-templated transcription GO:0045944P:positive regulation of transcription by RNA polymerase II GO:0048385P:regulation of retinoic acid receptor signaling pathway GO:0048703P:embryonic viscerocranium morphogenesis GO:0060059P:embryonic retina morphogenesis in camera-type eye GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0004658F:propionyl-CoA carboxylase activity GO:0005524F:ATP binding GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0005739C:mitochondrion |
EC:EC:6.4.1.3 |
| 2356 |
SRR924327_primary_scf7180002497244_430-899
Len: 469 bp
E-val: 5.7E-35
|
KPP67567.1lens fiber membrane intrinsic protein-like
|
GO:0005212F:structural constituent of eye lens GO:0005886C:plasma membrane |
- |
| 2357 |
SRR924327_primary_scf7180002497290_582-889
Len: 307 bp
E-val: 1.3E-35
|
KTG39365.1hypothetical protein cypCar_00000859, partial
|
GO:0009266P:response to temperature stimulus GO:0032922P:circadian regulation of gene expression GO:0043153P:entrainment of circadian clock by photoperiod GO:0045892P:negative regulation of DNA-templated transcription GO:0003677F:DNA binding GO:0005201F:extracellular matrix structural constituent GO:0046872F:metal ion binding GO:0071949F:FAD binding GO:0005576C:extracellular region GO:0005581C:collagen trimer GO:0005634C:nucleus GO:0005737C:cytoplasm |
- |
| 2358 |
SRR924327_primary_scf7180002498072_1-824
Len: 823 bp
E-val: 1.4E-12
|
KTF76080.1hypothetical protein cypCar_00039940, partial
|
GO:0048009P:insulin-like growth factor receptor signaling pathway GO:0005829C:cytosol GO:0016020C:membrane GO:0031982C:vesicle GO:0043204C:perikaryon GO:1990635C:proximal dendrite |
- |
| 2359 |
SRR924327_primary_scf7180002498558_1-1191
Len: 1,190 bp
E-val: 1.6E-17
|
XP_018918332.1PREDICTED: plexin A3-like
|
GO:0003205P:cardiac chamber development GO:0007416P:synapse assembly GO:0008045P:motor neuron axon guidance GO:0030334P:regulation of cell migration GO:0048675P:axon extension GO:0048696P:regulation of collateral sprouting in absence of injury GO:0048755P:branching morphogenesis of a nerve GO:0060272P:embryonic skeletal joint morphogenesis GO:0071526P:semaphorin-plexin signaling pathway GO:0017154F:semaphorin receptor activity GO:0042802F:identical protein binding GO:0002116C:semaphorin receptor complex GO:0005886C:plasma membrane |
- |
| 2360 |
SRR924327_primary_scf7180002498691_1-1199
Len: 1,198 bp
E-val: 1.0E-35
|
KTF92320.1hypothetical protein cypCar_00016443, partial
|
GO:0001755P:neural crest cell migration GO:0007411P:axon guidance GO:0030335P:positive regulation of cell migration GO:0050919P:negative chemotaxis GO:0071526P:semaphorin-plexin signaling pathway GO:0030215F:semaphorin receptor binding GO:0045499F:chemorepellent activity GO:0005886C:plasma membrane |
- |
| 2361 |
SRR924327_primary_scf7180002498783_110-648
Len: 538 bp
E-val: 1.4E-53
|
KTF82879.1hypothetical protein cypCar_00023921
|
GO:0005198F:structural molecule activity GO:0005882C:intermediate filament |
- |
| 2362 |
SRR924327_primary_scf7180002499290_1-792
Len: 791 bp
E-val: 5.1E-28
|
KTF92702.1hypothetical protein cypCar_00007969
|
GO:0006364P:rRNA processing GO:0042274P:ribosomal small subunit biogenesis GO:0045766P:positive regulation of angiogenesis GO:0045943P:positive regulation of transcription by RNA polymerase I GO:0032040C:small-subunit processome |
- |
| 2363 |
SRR924327_primary_scf7180002500279_582-941
Len: 359 bp
E-val:
|
-
|
-
|
- |
| 2364 |
SRR924327_primary_scf7180002501346_189-892
Len: 703 bp
E-val: 4.8E-38
|
XP_016147945.1PREDICTED: beta-1,4-galactosyltransferase 3-like
Glycosyltransferases
|
GO:0005975P:carbohydrate metabolic process GO:0008378F:galactosyltransferase activity GO:0046872F:metal ion binding GO:0000139C:Golgi membrane GO:0032580C:Golgi cisterna membrane |
EC:EC:2.4.1 |
| 2365 |
SRR924327_primary_scf7180002502381_1-768
Len: 767 bp
E-val: 4.2E-27
|
KTG46928.1hypothetical protein cypCar_00019929
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0008089P:anterograde axonal transport GO:0030154P:cell differentiation GO:0045893P:positive regulation of DNA-templated transcription GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0043565F:sequence-specific DNA binding GO:0005634C:nucleus GO:0005739C:mitochondrion GO:1904115C:axon cytoplasm |
- |
| 2366 |
SRR924327_primary_scf7180002502622_247-1119
Len: 872 bp
E-val: 5.4E-31
|
XP_026139945.1E3 ubiquitin-protein ligase TRIM71-like
Ligases; Acyltransferases
|
GO:0000082P:G1/S transition of mitotic cell cycle GO:0000209P:protein polyubiquitination GO:0008543P:fibroblast growth factor receptor signaling pathway GO:0010172P:embryonic body morphogenesis GO:0021915P:neural tube development GO:0035278P:miRNA-mediated gene silencing by inhibition of translation GO:0043161P:proteasome-mediated ubiquitin-dependent protein catabolic process GO:0051865P:protein autoubiquitination GO:0072089P:stem cell proliferation GO:2000177P:regulation of neural precursor cell proliferation GO:0008270F:zinc ion binding GO:0016874F:ligase activity GO:0035198F:miRNA binding GO:0061630F:ubiquitin protein ligase activity GO:0000932C:P-body GO:0005739C:mitochondrion |
EC:EC:6 EC:EC:2.3.2 |
| 2367 |
SRR924327_primary_scf7180002502780_1-660
Len: 659 bp
E-val: 1.2E-19
|
XP_026125905.1tubulin alpha-8 chain-like
Hydrolases
|
GO:0007010P:cytoskeleton organization GO:0007017P:microtubule-based process GO:0005200F:structural constituent of cytoskeleton GO:0005525F:GTP binding GO:0016787F:hydrolase activity GO:0005737C:cytoplasm GO:0005874C:microtubule |
EC:EC:3 |
| 2368 |
SRR924327_primary_scf7180002503877_1-1019
Len: 1,018 bp
E-val: 3.1E-33
|
KTF91097.1hypothetical protein cypCar_00024298, partial
|
GO:0006886P:intracellular protein transport GO:0007156P:homophilic cell-cell adhesion GO:0009653P:anatomical structure morphogenesis GO:0034315P:regulation of Arp2/3 complex-mediated actin nucleation GO:0005509F:calcium ion binding GO:0005543F:phospholipid binding GO:0019904F:protein domain specific binding GO:0005886C:plasma membrane GO:0032588C:trans-Golgi network membrane |
- |
| 2369 |
SRR924327_primary_scf7180002504866_1-716
Len: 715 bp
E-val: 4.5E-23
|
KTF75428.1hypothetical protein cypCar_00031135
tubulin-glutamate ligase
|
GO:0002395P:immune response in nasopharyngeal-associated lymphoid tissue GO:0007288P:sperm axoneme assembly GO:0021702P:cerebellar Purkinje cell differentiation GO:0036211P:protein modification process GO:0120197P:mucociliary clearance GO:0120222P:regulation of blastocyst development GO:0005524F:ATP binding GO:0015631F:tubulin binding GO:0070740F:tubulin-glutamic acid ligase activity GO:0005576C:extracellular region GO:0005874C:microtubule GO:0036064C:ciliary basal body |
EC:EC:6.3.2.61 |
| 2370 |
SRR924327_primary_scf7180002505182_1-715
Len: 714 bp
E-val: 4.5E-39
|
XP_016396377.1PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like isoform X1
Transferring sulfur-containing groups; Transferring phosphorus-containing groups
|
GO:0002143P:tRNA wobble position uridine thiolation GO:0032447P:protein urmylation GO:0000049F:tRNA binding GO:0016779F:nucleotidyltransferase activity GO:0016783F:sulfurtransferase activity GO:0005829C:cytosol |
EC:EC:2.8.1 EC:EC:2.7.7 |
| 2371 |
SRR924327_primary_scf7180002505321_1-922
Len: 921 bp
E-val: 1.3E-128
|
KTF75029.1hypothetical protein cypCar_00033935
|
GO:0003333P:amino acid transmembrane transport GO:0046942P:carboxylic acid transport GO:0015171F:amino acid transmembrane transporter activity GO:0046943F:carboxylic acid transmembrane transporter activity GO:0005737C:cytoplasm GO:0005886C:plasma membrane GO:0043231C:intracellular membrane-bounded organelle |
- |
| 2372 |
SRR924327_primary_scf7180002505357_1-1138
Len: 1,137 bp
E-val: 6.4E-24
|
KTF91196.1hypothetical protein cypCar_00000226
|
GO:0006941P:striated muscle contraction GO:0007224P:smoothened signaling pathway GO:0014808P:release of sequestered calcium ion into cytosol by sarcoplasmic reticulum GO:0019722P:calcium-mediated signaling GO:0021532P:neural tube patterning GO:0048484P:enteric nervous system development GO:0048741P:skeletal muscle fiber development GO:1990791P:dorsal root ganglion development GO:0005219F:ryanodine-sensitive calcium-release channel activity GO:0005509F:calcium ion binding GO:0005515F:protein binding GO:0005790C:smooth endoplasmic reticulum GO:0030018C:Z disc GO:0033017C:sarcoplasmic reticulum membrane GO:0034704C:calcium channel complex GO:0042383C:sarcolemma |
- |
| 2373 |
SRR924327_primary_scf7180002505924_1-721
Len: 720 bp
E-val: 2.7E-76
|
XP_018972583.1PREDICTED: immunoglobulin superfamily member 11-like
|
GO:0005911C:cell-cell junction GO:0016020C:membrane |
- |
| 2374 |
SRR924327_primary_scf7180002506632_305-616
Len: 311 bp
E-val: 3.0E-32
|
XP_016095522.1PREDICTED: catenin delta-1 isoform X1
|
GO:0003401P:axis elongation GO:0008078P:mesodermal cell migration GO:0042074P:cell migration involved in gastrulation GO:0048513P:animal organ development GO:0048920P:posterior lateral line neuromast primordium migration GO:0098609P:cell-cell adhesion GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005886C:plasma membrane GO:0005912C:adherens junction |
- |
| 2375 |
SRR924327_primary_scf7180002508382_283-1065
Len: 782 bp
E-val: 7.5E-24
|
XP_016141423.1PREDICTED: active breakpoint cluster region-related protein-like, partial
Transferring phosphorus-containing groups
|
GO:0035556P:intracellular signal transduction GO:0004674F:protein serine/threonine kinase activity GO:0005085F:guanyl-nucleotide exchange factor activity GO:0005096F:GTPase activator activity GO:0016020C:membrane GO:0030424C:axon GO:0043197C:dendritic spine |
EC:EC:2.7.11 |