Browse genomic annotations and functional data
| # | Sequence | Description | GO Annotations | Cross Refs |
|---|---|---|---|---|
| 24576 |
SRR953582_primary_scf7180002161338_1-2556
Len: 2,555 bp
E-val: 1.9E-95
|
XP_021333010.1nuclear factor 1 X-type-like isoform X3
|
GO:0006260P:DNA replication GO:0006357P:regulation of transcription by RNA polymerase II GO:0045893P:positive regulation of DNA-templated transcription GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus |
- |
| 24577 |
SRR953582_primary_scf7180002161347_1-1439
Len: 1,438 bp
E-val: 2.7E-67
|
XP_018925100.1PREDICTED: probable phospholipid-transporting ATPase VD
P-type phospholipid transporter; nucleoside-triphosphate phosphatase
|
GO:0045332P:phospholipid translocation GO:0000287F:magnesium ion binding GO:0005524F:ATP binding GO:0016887F:ATP hydrolysis activity GO:0140326F:ATPase-coupled intramembrane lipid transporter activity GO:0005886C:plasma membrane |
EC:EC:7.6.2.1 EC:EC:3.6.1.15 |
| 24578 |
SRR953582_primary_scf7180002161352_1-1026
Len: 1,025 bp
E-val: 6.9E-17
|
XP_016149154.1PREDICTED: UBX domain-containing protein 1-like
|
GO:0031397P:negative regulation of protein ubiquitination GO:0032435P:negative regulation of proteasomal ubiquitin-dependent protein catabolic process GO:1903094P:negative regulation of protein K48-linked deubiquitination GO:0036435F:K48-linked polyubiquitin modification-dependent protein binding GO:0005634C:nucleus GO:0005737C:cytoplasm |
- |
| 24579 |
SRR953582_primary_scf7180002161376_1-2666
Len: 2,665 bp
E-val: 2.2E-22
|
KTG38734.1hypothetical protein cypCar_00016339
|
-
|
- |
| 24580 |
SRR953582_primary_scf7180002161399_404-1063
Len: 659 bp
E-val: 1.9E-28
|
KTF78203.1hypothetical protein cypCar_00014186
|
GO:0006259P:DNA metabolic process GO:0006508P:proteolysis GO:0015074P:DNA integration GO:0042981P:regulation of apoptotic process GO:0003676F:nucleic acid binding GO:0004190F:aspartic-type endopeptidase activity GO:0004519F:endonuclease activity GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0005737C:cytoplasm GO:0005829C:cytosol |
- |
| 24581 |
SRR953582_primary_scf7180002161425_437-1144
Len: 707 bp
E-val: 5.8E-132
|
XP_018953139.1PREDICTED: rhodopsin kinase
rhodopsin kinase; [G-protein-coupled receptor] kinase
|
GO:0006355P:regulation of DNA-templated transcription GO:0007601P:visual perception GO:0022400P:regulation of opsin-mediated signaling pathway GO:1902600P:proton transmembrane transport GO:0003677F:DNA binding GO:0005524F:ATP binding GO:0015297F:antiporter activity GO:0050254F:rhodopsin kinase activity GO:0005634C:nucleus GO:0005667C:transcription regulator complex GO:0005737C:cytoplasm GO:0016020C:membrane |
EC:EC:2.7.11.14 EC:EC:2.7.11.16 |
| 24582 |
SRR953582_primary_scf7180002161433_1022-1690
Len: 668 bp
E-val: 1.7E-112
|
RXN15555.1neuron navigator 1-like protein
nucleoside-triphosphate phosphatase
|
GO:0001578P:microtubule bundle formation GO:0001764P:neuron migration GO:0016887F:ATP hydrolysis activity GO:0015630C:microtubule cytoskeleton GO:0043194C:axon initial segment |
EC:EC:3.6.1.15 |
| 24583 |
SRR953582_primary_scf7180002161453_2694-3136
Len: 442 bp
E-val: 8.1E-15
|
XP_016325508.1PREDICTED: BTB/POZ domain-containing protein 3-like
|
GO:0021987P:cerebral cortex development GO:0048813P:dendrite morphogenesis GO:0042802F:identical protein binding GO:0005634C:nucleus GO:0005829C:cytosol |
- |
| 24584 |
SRR953582_primary_scf7180002161459_1-1417
Len: 1,416 bp
E-val: 1.2E-213
|
RXN07212.1netrin-1-like isoform X1
|
GO:0001569P:branching involved in blood vessel morphogenesis GO:0001947P:heart looping GO:0003146P:heart jogging GO:0008045P:motor neuron axon guidance GO:0016358P:dendrite development GO:0016525P:negative regulation of angiogenesis GO:0021960P:anterior commissure morphogenesis GO:0030516P:regulation of axon extension GO:0030878P:thyroid gland development GO:0033564P:anterior/posterior axon guidance GO:0035908P:ventral aorta development GO:0048665P:neuron fate specification GO:0048846P:axon extension involved in axon guidance GO:0061386P:closure of optic fissure GO:0061626P:pharyngeal arch artery morphogenesis GO:0071678P:olfactory bulb axon guidance GO:0005515F:protein binding GO:0005576C:extracellular region GO:0005604C:basement membrane GO:0005737C:cytoplasm |
- |
| 24585 |
SRR953582_primary_scf7180002161503_65-2198
Len: 2,133 bp
E-val: 3.7E-49
|
KTF90343.1hypothetical protein cypCar_00014249
|
GO:0003007P:heart morphogenesis GO:0007420P:brain development GO:0010468P:regulation of gene expression GO:0034087P:establishment of mitotic sister chromatid cohesion GO:0048565P:digestive tract development GO:0048703P:embryonic viscerocranium morphogenesis GO:0071169P:establishment of protein localization to chromatin GO:0140588P:chromatin looping GO:1990414P:replication-born double-strand break repair via sister chromatid exchange GO:0003682F:chromatin binding GO:0061775F:cohesin loader activity GO:0005634C:nucleus GO:0090694C:Scc2-Scc4 cohesin loading complex |
- |
| 24586 |
SRR953582_primary_scf7180002161504_1-1803
Len: 1,802 bp
E-val: 1.0E-79
|
KTF90616.1hypothetical protein cypCar_00009973
|
- | |
| 24587 |
SRR953582_primary_scf7180002161520_1-490
Len: 489 bp
E-val: 2.6E-54
|
XP_026140648.1synaptotagmin-11-like
|
GO:0017158P:regulation of calcium ion-dependent exocytosis GO:0048791P:calcium ion-regulated exocytosis of neurotransmitter GO:0099502P:calcium-dependent activation of synaptic vesicle fusion GO:0000149F:SNARE binding GO:0001786F:phosphatidylserine binding GO:0005509F:calcium ion binding GO:0005544F:calcium-dependent phospholipid binding GO:0030276F:clathrin binding GO:0061891F:calcium ion sensor activity GO:0005886C:plasma membrane GO:0030424C:axon GO:0070382C:exocytic vesicle GO:0098793C:presynapse |
- |
| 24588 |
SRR953582_primary_scf7180002161537_472-2276
Len: 1,804 bp
E-val: 2.6E-136
|
KTF88979.1hypothetical protein cypCar_00014524, partial
|
GO:0000281P:mitotic cytokinesis GO:0009953P:dorsal/ventral pattern formation GO:0030513P:positive regulation of BMP signaling pathway GO:0042074P:cell migration involved in gastrulation GO:0051013P:microtubule severing GO:0051168P:nuclear export GO:0051255P:spindle midzone assembly GO:0060026P:convergent extension GO:0090090P:negative regulation of canonical Wnt signaling pathway GO:0008013F:beta-catenin binding GO:0005737C:cytoplasm GO:0005813C:centrosome GO:0005874C:microtubule GO:0030496C:midbody |
- |
| 24589 |
SRR953582_primary_scf7180002161540_1769-2730
Len: 961 bp
E-val: 1.1E-37
|
KTG38900.1hypothetical protein cypCar_00007209
|
GO:0003677F:DNA binding GO:0043130F:ubiquitin binding |
- |
| 24590 |
SRR953582_primary_scf7180002161556_1-1830
Len: 1,829 bp
E-val: 5.1E-55
|
RXN05248.1heterogeneous nuclear ribonucleo L-like isoform X1
|
GO:0006397P:mRNA processing GO:0045292P:mRNA cis splicing, via spliceosome GO:0003723F:RNA binding GO:0003729F:mRNA binding GO:0008270F:zinc ion binding GO:0005634C:nucleus GO:0016607C:nuclear speck |
- |
| 24591 |
SRR953582_primary_scf7180002161575_1-3263
Len: 3,262 bp
E-val: 7.7E-38
|
XP_026085319.1autophagy-related protein 2 homolog B isoform X1
|
GO:0000045P:autophagosome assembly GO:0000422P:autophagy of mitochondrion GO:0006869P:lipid transport GO:0034727P:piecemeal microautophagy of the nucleus GO:0061709P:reticulophagy GO:0061723P:glycophagy GO:0032266F:phosphatidylinositol-3-phosphate binding GO:0043495F:protein-membrane adaptor activity GO:0005789C:endoplasmic reticulum membrane GO:0005811C:lipid droplet GO:0034045C:phagophore assembly site membrane GO:0061908C:phagophore |
- |
| 24592 |
SRR953582_primary_scf7180002161603_1-2794
Len: 2,793 bp
E-val: 6.8E-168
|
XP_018933649.1PREDICTED: transmembrane protein 132D-like
|
GO:0016020C:membrane |
- |
| 24593 |
SRR953582_primary_scf7180002161615_848-2713
Len: 1,865 bp
E-val: 7.1E-28
|
XP_016336324.1PREDICTED: dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A-like
3',5'-cyclic-nucleotide phosphodiesterase
|
GO:0004114F:3',5'-cyclic-nucleotide phosphodiesterase activity |
EC:EC:3.1.4.17 |
| 24594 |
SRR953582_primary_scf7180002161668_1-2870
Len: 2,869 bp
E-val: 1.4E-88
|
KTF79292.1hypothetical protein cypCar_00044994, partial
|
GO:0007155P:cell adhesion GO:0016020C:membrane GO:0033010C:paranodal junction GO:0070161C:anchoring junction |
- |
| 24595 |
SRR953582_primary_scf7180002161677_1-1537
Len: 1,536 bp
E-val: 1.0E-274
|
KTG34395.1hypothetical protein cypCar_00013838
|
GO:0006357P:regulation of transcription by RNA polymerase II GO:0000978F:RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981F:DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634C:nucleus GO:0005737C:cytoplasm |
- |
| 24596 |
SRR953582_primary_scf7180002161691_1-659
Len: 658 bp
E-val: 6.4E-24
|
XP_026129566.1hypoxia up-regulated protein 1
|
GO:0005783C:endoplasmic reticulum |
- |
| 24597 |
SRR953582_primary_scf7180002161758_1077-3075
Len: 1,998 bp
E-val: 1.2E-36
|
XP_018960529.1PREDICTED: mitochondrial glutamate carrier 1-like, partial
|
GO:0009987P:cellular process |
- |
| 24598 |
SRR953582_primary_scf7180002161771_757-2042
Len: 1,285 bp
E-val: 1.9E-56
|
KTF75902.1hypothetical protein cypCar_00038245
|
GO:0006941P:striated muscle contraction |
- |
| 24599 |
SRR953582_primary_scf7180002161792_1-3366
Len: 3,365 bp
E-val: 8.3E-35
|
XP_018963708.1PREDICTED: transcription factor 7-like 1-B
|
GO:0007389P:pattern specification process GO:0007420P:brain development GO:0050794P:regulation of cellular process GO:0060429P:epithelium development |
- |
| 24600 |
SRR953582_primary_scf7180002161797_1-2750
Len: 2,749 bp
E-val: 4.7E-36
|
XP_018954241.1PREDICTED: dynamin-3-like
nucleoside-triphosphate phosphatase
|
GO:0016185P:synaptic vesicle budding from presynaptic endocytic zone membrane GO:0031623P:receptor internalization GO:0003924F:GTPase activity GO:0005525F:GTP binding GO:0008017F:microtubule binding GO:0005737C:cytoplasm GO:0005874C:microtubule GO:0005886C:plasma membrane GO:0098793C:presynapse |
EC:EC:3.6.1.15 |